RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 LELP1Q5T871 98 aa2.13□□□□□ -2.07
CTR9-205ENST00000529898 TEP1Q99973 2627 aaKnown RBP2.13□□□□□ -2.07
CTR9-205ENST00000529898 FBN1P35555 2871 aaKnown RBP2.12□□□□□ -2.07
CTR9-205ENST00000529898 HELZ2Q9BYK8 2649 aaKnown RBP2.12□□□□□ -2.07
CTR9-205ENST00000529898 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
CTR9-205ENST00000529898 VPS13DQ5THJ4 4388 aa2.12□□□□□ -2.07
CTR9-205ENST00000529898 HECTD4Q9Y4D8 3996 aa2.11□□□□□ -2.07
CTR9-205ENST00000529898 INE1O15225 51 aa2.11□□□□□ -2.07
CTR9-205ENST00000529898 DEFB4AO15263 64 aa2.11□□□□□ -2.07
CTR9-205ENST00000529898 DEFB135Q30KP9 77 aa2.11□□□□□ -2.07
CTR9-205ENST00000529898 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
CTR9-205ENST00000529898 BAHCC1Q9P281 2608 aa2.11□□□□□ -2.07
CTR9-205ENST00000529898 PLECQ15149 4684 aaKnown RBP2.11□□□□□ -2.07
CTR9-205ENST00000529898 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
CTR9-205ENST00000529898 DNAH7Q8WXX0 4024 aa2.1□□□□□ -2.07
CTR9-205ENST00000529898 ATRQ13535 2644 aa2.1□□□□□ -2.07
CTR9-205ENST00000529898 PRKDCP78527 4128 aaKnown RBP2.1□□□□□ -2.07
CTR9-205ENST00000529898 FRAS1Q86XX4 4008 aa2.09□□□□□ -2.08
CTR9-205ENST00000529898 DNAH2Q9P225 4427 aa2.09□□□□□ -2.08
CTR9-205ENST00000529898 COL7A1Q02388 2944 aa2.08□□□□□ -2.08
CTR9-205ENST00000529898 F8P00451 2351 aa2.08□□□□□ -2.08
CTR9-205ENST00000529898 FASNP49327 2511 aaKnown RBP2.08□□□□□ -2.08
CTR9-205ENST00000529898 DNAH6Q9C0G6 4158 aa2.07□□□□□ -2.08
CTR9-205ENST00000529898 K7EIL1 84 aa2.07□□□□□ -2.08
CTR9-205ENST00000529898 HTN3P15516 51 aa2.07□□□□□ -2.08
CTR9-205ENST00000529898 R4GN34 69 aa2.07□□□□□ -2.08
CTR9-205ENST00000529898 FLNBO75369 2602 aaKnown RBP2.07□□□□□ -2.08
CTR9-205ENST00000529898 H3BNG1 76 aa2.06□□□□□ -2.08
CTR9-205ENST00000529898 SPART-AS1P0CW21 52 aa2.06□□□□□ -2.08
CTR9-205ENST00000529898 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
CTR9-205ENST00000529898 Q6ZRN7 208 aaPredicted RBP2.06□□□□□ -2.08
CTR9-205ENST00000529898 CSMD3Q7Z407 3707 aa2.06□□□□□ -2.08
CTR9-205ENST00000529898 FLG2Q5D862 2391 aaPredicted RBP2.06□□□□□ -2.08
CTR9-205ENST00000529898 MAST4O15021 2626 aa2.05□□□□□ -2.08
CTR9-205ENST00000529898 LINC01556Q5JQF7 62 aa2.05□□□□□ -2.08
CTR9-205ENST00000529898 HECTD1Q9ULT8 2610 aa2.05□□□□□ -2.08
CTR9-205ENST00000529898 NBEAL1Q6ZS30 2694 aa2.04□□□□□ -2.08
CTR9-205ENST00000529898 SPACA4Q8TDM5 124 aa2.04□□□□□ -2.08
CTR9-205ENST00000529898 SMR3AQ99954 134 aa2.04□□□□□ -2.08
CTR9-205ENST00000529898 DNAH11Q96DT5 4516 aa2.04□□□□□ -2.08
CTR9-205ENST00000529898 STAB1Q9NY15 2570 aa2.03□□□□□ -2.08
CTR9-205ENST00000529898 DNAH5Q8TE73 4624 aa2.02□□□□□ -2.09
CTR9-205ENST00000529898 FBN3Q75N90 2809 aa2.02□□□□□ -2.09
CTR9-205ENST00000529898 NOTCH1P46531 2555 aa2.02□□□□□ -2.09
CTR9-205ENST00000529898 UBE2DNLQ8IWF7 75 aa2.02□□□□□ -2.09
CTR9-205ENST00000529898 STARD9Q9P2P6 4700 aa2.02□□□□□ -2.09
CTR9-205ENST00000529898 COL6A5A8TX70 2615 aa2.01□□□□□ -2.09
CTR9-205ENST00000529898 PRLHP81277 87 aa2.01□□□□□ -2.09
CTR9-205ENST00000529898 STAB2Q8WWQ8 2551 aa2□□□□□ -2.09
CTR9-205ENST00000529898 A0A096LNI7 61 aa1.99□□□□□ -2.09
CTR9-205ENST00000529898 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
CTR9-205ENST00000529898 MEGF8Q7Z7M0 2845 aa1.98□□□□□ -2.09
CTR9-205ENST00000529898 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
CTR9-205ENST00000529898 PKD1P98161 4303 aa1.97□□□□□ -2.09
CTR9-205ENST00000529898 SPINK1P00995 79 aa1.97□□□□□ -2.09
CTR9-205ENST00000529898 KRTAP13-1Q8IUC0 172 aa1.97□□□□□ -2.09
CTR9-205ENST00000529898 KMT2AQ03164 3969 aa1.97□□□□□ -2.09
CTR9-205ENST00000529898 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
CTR9-205ENST00000529898 KRTAP10-10P60014 251 aa1.96□□□□□ -2.1
CTR9-205ENST00000529898 S4R3F8 94 aa1.96□□□□□ -2.1
CTR9-205ENST00000529898 LRP1BQ9NZR2 4599 aa1.94□□□□□ -2.1
CTR9-205ENST00000529898 FAT2Q9NYQ8 4349 aa1.94□□□□□ -2.1
CTR9-205ENST00000529898 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
CTR9-205ENST00000529898 J3QKU1 62 aa1.93□□□□□ -2.1
CTR9-205ENST00000529898 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
CTR9-205ENST00000529898 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
CTR9-205ENST00000529898 APLNQ9ULZ1 77 aa1.91□□□□□ -2.1
CTR9-205ENST00000529898 APOBP04114 4563 aaKnown RBP1.9□□□□□ -2.1
CTR9-205ENST00000529898 MGAM2Q2M2H8 2515 aa1.9□□□□□ -2.11
CTR9-205ENST00000529898 TGP01266 2768 aa1.9□□□□□ -2.11
CTR9-205ENST00000529898 M0QZ58 72 aa1.88□□□□□ -2.11
CTR9-205ENST00000529898 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CTR9-205ENST00000529898 SPINK6Q6UWN8 80 aa1.88□□□□□ -2.11
CTR9-205ENST00000529898 PKHD1P08F94 4074 aa1.87□□□□□ -2.11
CTR9-205ENST00000529898 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
CTR9-205ENST00000529898 Q5VSD8 79 aa1.86□□□□□ -2.11
CTR9-205ENST00000529898 TNXBP22105 4242 aa1.86□□□□□ -2.11
CTR9-205ENST00000529898 DYNC1H1Q14204 4646 aaKnown RBP1.86□□□□□ -2.11
CTR9-205ENST00000529898 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CTR9-205ENST00000529898 HSPG2P98160 4391 aa1.86□□□□□ -2.11
CTR9-205ENST00000529898 A0A0D9SG42 100 aa1.85□□□□□ -2.11
CTR9-205ENST00000529898 HYDINQ4G0P3 5121 aa1.84□□□□□ -2.11
CTR9-205ENST00000529898 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
CTR9-205ENST00000529898 FAT1Q14517 4588 aa1.84□□□□□ -2.12
CTR9-205ENST00000529898 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
CTR9-205ENST00000529898 KRTAP13-2Q52LG2 175 aa1.83□□□□□ -2.12
CTR9-205ENST00000529898 DNHD1Q96M86 4753 aa1.83□□□□□ -2.12
CTR9-205ENST00000529898 RPS29P62273 56 aaKnown RBP1.82□□□□□ -2.12
CTR9-205ENST00000529898 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
CTR9-205ENST00000529898 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
CTR9-205ENST00000529898 MYCBP2O75592 4640 aa1.73□□□□□ -2.13
CTR9-205ENST00000529898 RYR2Q92736 4967 aa1.69□□□□□ -2.14
CTR9-205ENST00000529898 C9orf92A6NGG3 77 aa1.69□□□□□ -2.14
CTR9-205ENST00000529898 KRTAP10-4P60372 401 aaPredicted RBP1.69□□□□□ -2.14
CTR9-205ENST00000529898 TNP1P09430 55 aa1.67□□□□□ -2.14
CTR9-205ENST00000529898 KMT2CQ8NEZ4 4911 aaKnown RBP1.67□□□□□ -2.14
CTR9-205ENST00000529898 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
CTR9-205ENST00000529898 LPAP08519 4548 aa1.67□□□□□ -2.14
CTR9-205ENST00000529898 LRP2P98164 4655 aa1.65□□□□□ -2.15
CTR9-205ENST00000529898 RYR1P21817 5038 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms