RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IGLV10-54A0A075B6I4 117 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 A0A096LPF7 62 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 TRAV13-2A0A0B4J235 113 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 TMEM262E9PQX1 116 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 K7ERJ3 54 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 COX6CP09669 75 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 SPINK8P0C7L1 97 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 DEFB130BP0DP73 79 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 DEFB130AP0DP74 79 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 HRES1P13985 223 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 ATXN8Q156A1 80 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 ESRGQ1W209 222 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 ETDBQ3ZM63 59 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 KRTAP26-1Q6PEX3 210 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 LYPD5Q6UWN5 251 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 C2orf82Q6UX34 121 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 COX7B2Q8TF08 81 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 PPDPFLQ8WWR9 84 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 RAB37Q96AX2 223 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 OBSCN-AS1Q96MR7 158 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 C20orf166-AS1Q96NR2 134 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 C14orf132Q9NPU4 83 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 PRO2289Q9P1D8 64 aa0.95□□□□□ -2.26
HMGB1P18-201ENST00000438801 A0A1W2PNN7 141 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 CCDC179H3BU77 68 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 ACYP1P07311 99 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC01556Q5JQF7 62 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 ENHOQ6UWT2 76 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 C5orf38Q86SI9 138 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00269Q8N2A0 174 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 C9orf163Q8N9P6 203 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00526Q96FQ7 95 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 NAA38Q9BRA0 125 aaKnown RBP0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 C22orf24Q9Y442 160 aa0.94□□□□□ -2.26
HMGB1P18-201ENST00000438801 A0A1W2PNM2 257 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 hDV103S1A0JD37 113 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 SNCGO76070 127 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 CRPP02741 224 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 ANGP03950 147 aaKnown RBP0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00158P58513 81 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 SMIM11BQ8TCY0 68 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 SERP1Q9Y6X1 66 aa0.93□□□□□ -2.26
HMGB1P18-201ENST00000438801 TRBV7-7A0A0K0K1E9 115 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 JMJD7-PLA2G4BH0Y9G9 81 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 PDE6GP18545 87 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 SPAG11BQ08648 103 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 UNQ6190/PRO20217Q6UXQ8 127 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00575Q6W349 94 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 LINC00643Q86TS7 51 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 CLEC2BQ92478 149 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 KCNQ1DNQ9H478 68 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 TOMM7Q9P0U1 55 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 C6orf48Q9UBA6 75 aa0.92□□□□□ -2.26
HMGB1P18-201ENST00000438801 LOC110117498A0A087WWA1 95 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 IGKV3OR2-268A0A0C4DH90 116 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 TRBV10-3A0A0K0K1G6 114 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 TEX49A0A1B0GTD5 131 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 hADV29S1A0JD25 119 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 BCE1O60756 84 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 DNAL4O96015 105 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 CCKP06307 115 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 SPRR1AP35321 89 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 S100A7L2Q5SY68 101 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 FP248Q71RG6 208 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 WFDC10BQ8IUB3 73 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 ORMDL1Q9P0S3 153 aa0.91□□□□□ -2.26
HMGB1P18-201ENST00000438801 IGLV5-48A0A075B6I7 105 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 TRAV23DV6A0A075B6W5 121 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 ERC2-IT1O76042 136 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 MT-ATP8P03928 68 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 COX7BP24311 80 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 ELOF1P60002 83 aaKnown RBP0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 NPC2P61916 151 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 MIR22HGQ0VDD5 57 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 PCOTHQ58A44 107 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 C9orf116Q5BN46 136 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 ATP5EP2Q5VTU8 51 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 Q6JHZ5 121 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 CLPSL2Q6UWE3 100 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 TMEM254Q8TBM7 123 aa0.9□□□□□ -2.27
HMGB1P18-201ENST00000438801 TRBV7-4A0A0J9YYF1 115 aa0.89□□□□□ -2.27
HMGB1P18-201ENST00000438801 SPRR1BP22528 89 aa0.89□□□□□ -2.27
HMGB1P18-201ENST00000438801 Q1T7F1 81 aa0.89□□□□□ -2.27
HMGB1P18-201ENST00000438801 LINC00474Q9P2X8 69 aa0.89□□□□□ -2.27
HMGB1P18-201ENST00000438801 NCR3O14931 201 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 COX7CP15954 63 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 C1orf137Q5JT78 98 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 C9orf153Q5TBE3 101 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 Q6ZQY7 126 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 Q6ZRX8 168 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 SPRR4Q96PI1 79 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 DSCR8Q96T75 97 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 UBL5Q9BZL1 73 aa0.88□□□□□ -2.27
HMGB1P18-201ENST00000438801 ETDCA0A1B0GVM5 59 aa0.87□□□□□ -2.27
HMGB1P18-201ENST00000438801 ATOX1O00244 68 aa0.87□□□□□ -2.27
HMGB1P18-201ENST00000438801 ATP5EP56381 51 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P18-201ENST00000438801 SERP2Q8N6R1 65 aa0.87□□□□□ -2.27
HMGB1P18-201ENST00000438801 A0A096LNI7 61 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms