RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 H0YAA0 97 aa2.45□□□□□ -2.02
RFC4-204ENST00000417876 C1orf134Q5TEV5 83 aa2.45□□□□□ -2.02
RFC4-204ENST00000417876 Q6ZSA8 131 aa2.45□□□□□ -2.02
RFC4-204ENST00000417876 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
RFC4-204ENST00000417876 FBN1P35555 2871 aaKnown RBP2.45□□□□□ -2.02
RFC4-204ENST00000417876 TENM4Q6N022 2769 aa2.44□□□□□ -2.02
RFC4-204ENST00000417876 LY6G6CO95867 125 aa2.44□□□□□ -2.02
RFC4-204ENST00000417876 SSBP3-AS1Q7Z2R9 100 aa2.44□□□□□ -2.02
RFC4-204ENST00000417876 FRAS1Q86XX4 4008 aa2.44□□□□□ -2.02
RFC4-204ENST00000417876 TEP1Q99973 2627 aaKnown RBP2.42□□□□□ -2.02
RFC4-204ENST00000417876 NBDYA0A0U1RRE5 68 aa2.42□□□□□ -2.02
RFC4-204ENST00000417876 SPINK6Q6UWN8 80 aa2.42□□□□□ -2.02
RFC4-204ENST00000417876 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
RFC4-204ENST00000417876 BAHCC1Q9P281 2608 aa2.41□□□□□ -2.02
RFC4-204ENST00000417876 A0A1B0GU33 70 aa2.41□□□□□ -2.02
RFC4-204ENST00000417876 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
RFC4-204ENST00000417876 A0A087WTM6 91 aa2.4□□□□□ -2.03
RFC4-204ENST00000417876 NSD1Q96L73 2696 aaPredicted RBP2.4□□□□□ -2.03
RFC4-204ENST00000417876 HECTD4Q9Y4D8 3996 aa2.39□□□□□ -2.03
RFC4-204ENST00000417876 DNAH7Q8WXX0 4024 aa2.39□□□□□ -2.03
RFC4-204ENST00000417876 KMT2BQ9UMN6 2715 aaPredicted RBP2.39□□□□□ -2.03
RFC4-204ENST00000417876 ITPR2Q14571 2701 aa2.39□□□□□ -2.03
RFC4-204ENST00000417876 J3QKU1 62 aa2.38□□□□□ -2.03
RFC4-204ENST00000417876 ATRQ13535 2644 aa2.38□□□□□ -2.03
RFC4-204ENST00000417876 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
RFC4-204ENST00000417876 SACSQ9NZJ4 4579 aa2.38□□□□□ -2.03
RFC4-204ENST00000417876 HECTD1Q9ULT8 2610 aa2.38□□□□□ -2.03
RFC4-204ENST00000417876 DNAH2Q9P225 4427 aa2.38□□□□□ -2.03
RFC4-204ENST00000417876 UBE2DNLQ8IWF7 75 aa2.37□□□□□ -2.03
RFC4-204ENST00000417876 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
RFC4-204ENST00000417876 DNAH11Q96DT5 4516 aa2.37□□□□□ -2.03
RFC4-204ENST00000417876 MAST4O15021 2626 aa2.37□□□□□ -2.03
RFC4-204ENST00000417876 FLNBO75369 2602 aaKnown RBP2.36□□□□□ -2.03
RFC4-204ENST00000417876 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
RFC4-204ENST00000417876 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
RFC4-204ENST00000417876 HELZ2Q9BYK8 2649 aaKnown RBP2.35□□□□□ -2.03
RFC4-204ENST00000417876 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
RFC4-204ENST00000417876 FASNP49327 2511 aaKnown RBP2.34□□□□□ -2.03
RFC4-204ENST00000417876 TPRXLQ17RH7 258 aa2.34□□□□□ -2.03
RFC4-204ENST00000417876 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.04
RFC4-204ENST00000417876 STARD9Q9P2P6 4700 aa2.33□□□□□ -2.04
RFC4-204ENST00000417876 SPINK1P00995 79 aa2.33□□□□□ -2.04
RFC4-204ENST00000417876 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
RFC4-204ENST00000417876 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
RFC4-204ENST00000417876 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
RFC4-204ENST00000417876 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
RFC4-204ENST00000417876 COX6B2Q6YFQ2 88 aa2.32□□□□□ -2.04
RFC4-204ENST00000417876 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
RFC4-204ENST00000417876 NUPR2A6NF83 97 aa2.31□□□□□ -2.04
RFC4-204ENST00000417876 RPS29P62273 56 aaKnown RBP2.31□□□□□ -2.04
RFC4-204ENST00000417876 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
RFC4-204ENST00000417876 CRIPTQ9P021 101 aa2.3□□□□□ -2.04
RFC4-204ENST00000417876 MEGF8Q7Z7M0 2845 aa2.3□□□□□ -2.04
RFC4-204ENST00000417876 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
RFC4-204ENST00000417876 FBN3Q75N90 2809 aa2.29□□□□□ -2.04
RFC4-204ENST00000417876 NOTCH1P46531 2555 aa2.28□□□□□ -2.04
RFC4-204ENST00000417876 STAB2Q8WWQ8 2551 aa2.28□□□□□ -2.04
RFC4-204ENST00000417876 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.05
RFC4-204ENST00000417876 RPL37P61927 97 aaKnown RBP2.27□□□□□ -2.05
RFC4-204ENST00000417876 NBEAL1Q6ZS30 2694 aa2.27□□□□□ -2.05
RFC4-204ENST00000417876 TGP01266 2768 aa2.25□□□□□ -2.05
RFC4-204ENST00000417876 COL6A5A8TX70 2615 aa2.25□□□□□ -2.05
RFC4-204ENST00000417876 FLG2Q5D862 2391 aaPredicted RBP2.24□□□□□ -2.05
RFC4-204ENST00000417876 STAB1Q9NY15 2570 aa2.24□□□□□ -2.05
RFC4-204ENST00000417876 C10orf95Q9H7T3 257 aa2.24□□□□□ -2.05
RFC4-204ENST00000417876 KMT2AQ03164 3969 aa2.24□□□□□ -2.05
RFC4-204ENST00000417876 PKD1P98161 4303 aa2.22□□□□□ -2.05
RFC4-204ENST00000417876 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.05
RFC4-204ENST00000417876 S4R3F8 94 aa2.21□□□□□ -2.06
RFC4-204ENST00000417876 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
RFC4-204ENST00000417876 FAT2Q9NYQ8 4349 aa2.2□□□□□ -2.06
RFC4-204ENST00000417876 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
RFC4-204ENST00000417876 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
RFC4-204ENST00000417876 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
RFC4-204ENST00000417876 KRTAP10-4P60372 401 aaPredicted RBP2.18□□□□□ -2.06
RFC4-204ENST00000417876 A0A0D9SG42 100 aa2.17□□□□□ -2.06
RFC4-204ENST00000417876 C9orf92A6NGG3 77 aa2.17□□□□□ -2.06
RFC4-204ENST00000417876 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
RFC4-204ENST00000417876 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
RFC4-204ENST00000417876 DYNC1H1Q14204 4646 aaKnown RBP2.16□□□□□ -2.06
RFC4-204ENST00000417876 MGAM2Q2M2H8 2515 aa2.16□□□□□ -2.06
RFC4-204ENST00000417876 TNXBP22105 4242 aa2.16□□□□□ -2.06
RFC4-204ENST00000417876 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
RFC4-204ENST00000417876 FAT1Q14517 4588 aa2.14□□□□□ -2.07
RFC4-204ENST00000417876 FAT3Q8TDW7 4589 aa2.14□□□□□ -2.07
RFC4-204ENST00000417876 HSPG2P98160 4391 aa2.14□□□□□ -2.07
RFC4-204ENST00000417876 M0QZ58 72 aa2.11□□□□□ -2.07
RFC4-204ENST00000417876 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
RFC4-204ENST00000417876 DNHD1Q96M86 4753 aa2.07□□□□□ -2.08
RFC4-204ENST00000417876 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
RFC4-204ENST00000417876 SMR3BP02814 79 aaPredicted RBP2.03□□□□□ -2.08
RFC4-204ENST00000417876 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
RFC4-204ENST00000417876 DMBT1Q9UGM3 2413 aaPredicted RBP2.03□□□□□ -2.08
RFC4-204ENST00000417876 RYR2Q92736 4967 aa2.01□□□□□ -2.09
RFC4-204ENST00000417876 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
RFC4-204ENST00000417876 RYR1P21817 5038 aa1.98□□□□□ -2.09
RFC4-204ENST00000417876 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
RFC4-204ENST00000417876 HERC1Q15751 4861 aa1.97□□□□□ -2.09
RFC4-204ENST00000417876 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
RFC4-204ENST00000417876 KRTAP19-2Q3LHN2 52 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms