RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
LINC01349-201ENST00000416343 COL7A1Q02388 2944 aa1.98□□□□□ -2.09
LINC01349-201ENST00000416343 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
LINC01349-201ENST00000416343 FLG2Q5D862 2391 aaPredicted RBP1.97□□□□□ -2.09
LINC01349-201ENST00000416343 KRTAP13-2Q52LG2 175 aa1.97□□□□□ -2.09
LINC01349-201ENST00000416343 MAST4O15021 2626 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 ATRQ13535 2644 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 TRRAPQ9Y4A5 3859 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 SMR3AQ99954 134 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 S4R3F8 94 aa1.96□□□□□ -2.1
LINC01349-201ENST00000416343 MEGF8Q7Z7M0 2845 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 FASNP49327 2511 aaKnown RBP1.95□□□□□ -2.1
LINC01349-201ENST00000416343 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
LINC01349-201ENST00000416343 NOTCH1P46531 2555 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 C10orf95Q9H7T3 257 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 ITPR2Q14571 2701 aa1.95□□□□□ -2.1
LINC01349-201ENST00000416343 TGP01266 2768 aa1.94□□□□□ -2.1
LINC01349-201ENST00000416343 LYSTQ99698 3801 aa1.94□□□□□ -2.1
LINC01349-201ENST00000416343 A0A0D9SG42 100 aa1.94□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH3Q8TD57 4116 aa1.93□□□□□ -2.1
LINC01349-201ENST00000416343 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH8Q96JB1 4490 aa1.93□□□□□ -2.1
LINC01349-201ENST00000416343 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 LCE3AQ5TA76 89 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 CAMK2N1Q7Z7J9 78 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 COL6A5A8TX70 2615 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH10Q8IVF4 4471 aa1.92□□□□□ -2.1
LINC01349-201ENST00000416343 DYNC2H1Q8NCM8 4307 aaKnown RBP1.91□□□□□ -2.1
LINC01349-201ENST00000416343 DNAH17Q9UFH2 4485 aa1.91□□□□□ -2.1
LINC01349-201ENST00000416343 KRTAP1-4P0C5Y4 121 aa1.91□□□□□ -2.1
LINC01349-201ENST00000416343 STAB2Q8WWQ8 2551 aa1.91□□□□□ -2.1
LINC01349-201ENST00000416343 ANK2Q01484 3957 aa1.9□□□□□ -2.1
LINC01349-201ENST00000416343 M0QZ58 72 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP12-2P59991 146 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 HECTD4Q9Y4D8 3996 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
LINC01349-201ENST00000416343 USP24Q9UPU5 2620 aa1.89□□□□□ -2.11
LINC01349-201ENST00000416343 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
LINC01349-201ENST00000416343 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
LINC01349-201ENST00000416343 ZNF469Q96JG9 3925 aaPredicted RBP1.89□□□□□ -2.11
LINC01349-201ENST00000416343 J3QKU1 62 aa1.87□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
LINC01349-201ENST00000416343 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
LINC01349-201ENST00000416343 STAB1Q9NY15 2570 aa1.86□□□□□ -2.11
LINC01349-201ENST00000416343 HUWE1Q7Z6Z7 4374 aaKnown RBP1.85□□□□□ -2.11
LINC01349-201ENST00000416343 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 DNAH9Q9NYC9 4486 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 C9orf92A6NGG3 77 aa1.84□□□□□ -2.11
LINC01349-201ENST00000416343 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
LINC01349-201ENST00000416343 DNAH2Q9P225 4427 aa1.84□□□□□ -2.12
LINC01349-201ENST00000416343 DNAH6Q9C0G6 4158 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 CMYA5Q8N3K9 4069 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 PRO2289Q9P1D8 64 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 FBN3Q75N90 2809 aa1.83□□□□□ -2.12
LINC01349-201ENST00000416343 PRKDCP78527 4128 aaKnown RBP1.81□□□□□ -2.12
LINC01349-201ENST00000416343 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
LINC01349-201ENST00000416343 DNAH7Q8WXX0 4024 aa1.81□□□□□ -2.12
LINC01349-201ENST00000416343 KRTAP10-1P60331 282 aa1.81□□□□□ -2.12
LINC01349-201ENST00000416343 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
LINC01349-201ENST00000416343 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
LINC01349-201ENST00000416343 LRP1BQ9NZR2 4599 aa1.79□□□□□ -2.12
LINC01349-201ENST00000416343 INE1O15225 51 aa1.79□□□□□ -2.12
LINC01349-201ENST00000416343 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
LINC01349-201ENST00000416343 SACSQ9NZJ4 4579 aa1.76□□□□□ -2.13
LINC01349-201ENST00000416343 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
LINC01349-201ENST00000416343 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
LINC01349-201ENST00000416343 R4GN34 69 aa1.74□□□□□ -2.13
LINC01349-201ENST00000416343 VPS13BQ7Z7G8 4022 aa1.73□□□□□ -2.13
LINC01349-201ENST00000416343 KMT2AQ03164 3969 aa1.72□□□□□ -2.13
LINC01349-201ENST00000416343 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
LINC01349-201ENST00000416343 MYCBP2O75592 4640 aa1.71□□□□□ -2.13
LINC01349-201ENST00000416343 STARD9Q9P2P6 4700 aa1.71□□□□□ -2.14
LINC01349-201ENST00000416343 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
LINC01349-201ENST00000416343 Q5VSD8 79 aa1.7□□□□□ -2.14
LINC01349-201ENST00000416343 KRTAP10-4P60372 401 aaPredicted RBP1.69□□□□□ -2.14
LINC01349-201ENST00000416343 APOBP04114 4563 aaKnown RBP1.68□□□□□ -2.14
LINC01349-201ENST00000416343 PKD1P98161 4303 aa1.68□□□□□ -2.14
LINC01349-201ENST00000416343 TNP1P09430 55 aa1.68□□□□□ -2.14
LINC01349-201ENST00000416343 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
LINC01349-201ENST00000416343 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
LINC01349-201ENST00000416343 DYNC1H1Q14204 4646 aaKnown RBP1.66□□□□□ -2.14
LINC01349-201ENST00000416343 SMR3BP02814 79 aaPredicted RBP1.65□□□□□ -2.15
LINC01349-201ENST00000416343 FAT2Q9NYQ8 4349 aa1.64□□□□□ -2.15
LINC01349-201ENST00000416343 TNXBP22105 4242 aa1.64□□□□□ -2.15
LINC01349-201ENST00000416343 FAT3Q8TDW7 4589 aa1.63□□□□□ -2.15
LINC01349-201ENST00000416343 HSPG2P98160 4391 aa1.62□□□□□ -2.15
LINC01349-201ENST00000416343 FAT1Q14517 4588 aa1.61□□□□□ -2.15
LINC01349-201ENST00000416343 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
LINC01349-201ENST00000416343 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
LINC01349-201ENST00000416343 DNHD1Q96M86 4753 aa1.53□□□□□ -2.16
LINC01349-201ENST00000416343 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
LINC01349-201ENST00000416343 MT1HL1P0DM35 61 aa1.52□□□□□ -2.17
LINC01349-201ENST00000416343 KRTAP10-10P60014 251 aa1.5□□□□□ -2.17
LINC01349-201ENST00000416343 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
LINC01349-201ENST00000416343 HERC1Q15751 4861 aa1.48□□□□□ -2.17
LINC01349-201ENST00000416343 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
LINC01349-201ENST00000416343 HYDINQ4G0P3 5121 aa1.46□□□□□ -2.18
LINC01349-201ENST00000416343 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 278.4 ms