RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 G0S2P27469 103 aa-5.54□□□□□ -3.3
RNU6-1340P-201ENST00000384438 RPS25P62851 125 aaKnown RBP-5.54□□□□□ -3.3
RNU6-1340P-201ENST00000384438 SELENOWP63302 87 aa-5.54□□□□□ -3.3
RNU6-1340P-201ENST00000384438 DR1Q01658 176 aa-5.55□□□□□ -3.3
RNU6-1340P-201ENST00000384438 ENHOQ6UWT2 76 aa-5.55□□□□□ -3.3
RNU6-1340P-201ENST00000384438 SMIM3Q9BZL3 60 aa-5.55□□□□□ -3.3
RNU6-1340P-201ENST00000384438 MYMXA0A1B0GTQ4 84 aa-5.56□□□□□ -3.3
RNU6-1340P-201ENST00000384438 TMEM167BQ9NRX6 74 aa-5.56□□□□□ -3.3
RNU6-1340P-201ENST00000384438 PEG3Q9GZU2 1588 aa-5.57□□□□□ -3.3
RNU6-1340P-201ENST00000384438 LZICQ8WZA0 190 aa-5.57□□□□□ -3.3
RNU6-1340P-201ENST00000384438 KTN1Q86UP2 1357 aaKnown RBP-5.57□□□□□ -3.3
RNU6-1340P-201ENST00000384438 CKS1BP61024 79 aa-5.58□□□□□ -3.3
RNU6-1340P-201ENST00000384438 TDRG1Q3Y452 100 aa-5.58□□□□□ -3.3
RNU6-1340P-201ENST00000384438 ATPIF1Q9UII2 106 aa-5.58□□□□□ -3.3
RNU6-1340P-201ENST00000384438 EFCAB6Q5THR3 1501 aa-5.58□□□□□ -3.3
RNU6-1340P-201ENST00000384438 SYCP2Q9BX26 1530 aa-5.58□□□□□ -3.3
RNU6-1340P-201ENST00000384438 PEA15Q15121 130 aa-5.59□□□□□ -3.3
RNU6-1340P-201ENST00000384438 MEIG1Q5JSS6 88 aa-5.59□□□□□ -3.3
RNU6-1340P-201ENST00000384438 ATP6V1DQ9Y5K8 247 aa-5.59□□□□□ -3.3
RNU6-1340P-201ENST00000384438 MYO3AQ8NEV4 1616 aa-5.59□□□□□ -3.3
RNU6-1340P-201ENST00000384438 UQCRHLA0A096LP55 91 aa-5.6□□□□□ -3.31
RNU6-1340P-201ENST00000384438 CEBPZOSA8MTT3 80 aa-5.6□□□□□ -3.31
RNU6-1340P-201ENST00000384438 SPANXA1Q9NS26 97 aa-5.6□□□□□ -3.31
RNU6-1340P-201ENST00000384438 ABCC1P33527 1531 aa-5.61□□□□□ -3.31
RNU6-1340P-201ENST00000384438 TSTD1Q8NFU3 115 aa-5.62□□□□□ -3.31
RNU6-1340P-201ENST00000384438 DCAF1Q9Y4B6 1507 aa-5.63□□□□□ -3.31
RNU6-1340P-201ENST00000384438 A0A1B0GV72 72 aa-5.63□□□□□ -3.31
RNU6-1340P-201ENST00000384438 HOPXQ9BPY8 73 aaPredicted RBP-5.63□□□□□ -3.31
RNU6-1340P-201ENST00000384438 ADCY10Q96PN6 1610 aa-5.64□□□□□ -3.31
RNU6-1340P-201ENST00000384438 CEP162Q5TB80 1403 aa-5.65□□□□□ -3.31
RNU6-1340P-201ENST00000384438 PVALEFA0A1B0GWK0 134 aa-5.65□□□□□ -3.31
RNU6-1340P-201ENST00000384438 PFDN5Q99471 154 aa-5.66□□□□□ -3.32
RNU6-1340P-201ENST00000384438 ABCC3O15438 1527 aa-5.66□□□□□ -3.32
RNU6-1340P-201ENST00000384438 GNGT2O14610 69 aa-5.67□□□□□ -3.32
RNU6-1340P-201ENST00000384438 NBEAP1P0C6P0 100 aa-5.67□□□□□ -3.32
RNU6-1340P-201ENST00000384438 SIKE1Q9BRV8 207 aa-5.67□□□□□ -3.32
RNU6-1340P-201ENST00000384438 SNHG12Q9BXW3 62 aa-5.67□□□□□ -3.32
RNU6-1340P-201ENST00000384438 TPM2P07951 284 aa-5.68□□□□□ -3.32
RNU6-1340P-201ENST00000384438 TPM1P09493 284 aa-5.68□□□□□ -3.32
RNU6-1340P-201ENST00000384438 S100A1P23297 94 aa-5.68□□□□□ -3.32
RNU6-1340P-201ENST00000384438 SKA2Q8WVK7 121 aaPredicted RBP-5.68□□□□□ -3.32
RNU6-1340P-201ENST00000384438 TOMM7Q9P0U1 55 aa-5.68□□□□□ -3.32
RNU6-1340P-201ENST00000384438 CTXN2P0C2S0 81 aa-5.69□□□□□ -3.32
RNU6-1340P-201ENST00000384438 CFAP74Q9C0B2 1584 aa-5.69□□□□□ -3.32
RNU6-1340P-201ENST00000384438 FABP1P07148 127 aa-5.7□□□□□ -3.32
RNU6-1340P-201ENST00000384438 ATP5EP2Q5VTU8 51 aa-5.7□□□□□ -3.32
RNU6-1340P-201ENST00000384438 S100GP29377 79 aa-5.71□□□□□ -3.32
RNU6-1340P-201ENST00000384438 SMIM11AP58511 58 aa-5.71□□□□□ -3.32
RNU6-1340P-201ENST00000384438 AGLP35573 1532 aa-5.72□□□□□ -3.32
RNU6-1340P-201ENST00000384438 PYDC1Q8WXC3 89 aa-5.72□□□□□ -3.33
RNU6-1340P-201ENST00000384438 HSBP1L1C9JCN9 74 aa-5.73□□□□□ -3.33
RNU6-1340P-201ENST00000384438 ARPC4P59998 168 aa-5.73□□□□□ -3.33
RNU6-1340P-201ENST00000384438 DDA1Q9BW61 102 aa-5.73□□□□□ -3.33
RNU6-1340P-201ENST00000384438 COL5A1-AS1Q5SY13 56 aa-5.75□□□□□ -3.33
RNU6-1340P-201ENST00000384438 TRIQKQ629K1 86 aa-5.75□□□□□ -3.33
RNU6-1340P-201ENST00000384438 SVBPQ8N300 66 aa-5.75□□□□□ -3.33
RNU6-1340P-201ENST00000384438 K7EMI3 77 aa-5.76□□□□□ -3.33
RNU6-1340P-201ENST00000384438 FAUP35544 74 aaKnown RBP-5.77□□□□□ -3.33
RNU6-1340P-201ENST00000384438 S100A9P06702 114 aaKnown RBP-5.78□□□□□ -3.33
RNU6-1340P-201ENST00000384438 SMIM13P0DJ93 91 aa-5.78□□□□□ -3.33
RNU6-1340P-201ENST00000384438 LINC00470Q9BZP3 86 aa-5.78□□□□□ -3.33
RNU6-1340P-201ENST00000384438 A0A087WXM4 84 aa-5.79□□□□□ -3.34
RNU6-1340P-201ENST00000384438 CLTCL1P53675 1640 aa-5.8□□□□□ -3.34
RNU6-1340P-201ENST00000384438 DEFB121Q5J5C9 76 aa-5.8□□□□□ -3.34
RNU6-1340P-201ENST00000384438 LINC00643Q86TS7 51 aa-5.8□□□□□ -3.34
RNU6-1340P-201ENST00000384438 PRXQ9BXM0 1461 aa-5.81□□□□□ -3.34
RNU6-1340P-201ENST00000384438 PTMAP06454 111 aaKnown RBP-5.81□□□□□ -3.34
RNU6-1340P-201ENST00000384438 TFF3Q07654 80 aa-5.81□□□□□ -3.34
RNU6-1340P-201ENST00000384438 GID8Q9NWU2 228 aa-5.81□□□□□ -3.34
RNU6-1340P-201ENST00000384438 AKAIN1P0CW23 69 aa-5.82□□□□□ -3.34
RNU6-1340P-201ENST00000384438 S100A12P80511 92 aa-5.83□□□□□ -3.34
RNU6-1340P-201ENST00000384438 FAM25AB3EWG3 89 aa-5.84□□□□□ -3.34
RNU6-1340P-201ENST00000384438 FAM25CB3EWG5 89 aa-5.84□□□□□ -3.34
RNU6-1340P-201ENST00000384438 FAM25GB3EWG6 89 aa-5.84□□□□□ -3.34
RNU6-1340P-201ENST00000384438 M0R1W7 72 aa-5.85□□□□□ -3.35
RNU6-1340P-201ENST00000384438 TMEM203Q969S6 136 aa-5.86□□□□□ -3.35
RNU6-1340P-201ENST00000384438 NDUFA1O15239 70 aa-5.87□□□□□ -3.35
RNU6-1340P-201ENST00000384438 APELAP0DMC3 54 aa-5.87□□□□□ -3.35
RNU6-1340P-201ENST00000384438 CENPHQ9H3R5 247 aa-5.87□□□□□ -3.35
RNU6-1340P-201ENST00000384438 DUOX1Q9NRD9 1551 aa-5.88□□□□□ -3.35
RNU6-1340P-201ENST00000384438 SNRPFP62306 86 aaKnown RBP-5.88□□□□□ -3.35
RNU6-1340P-201ENST00000384438 TSC22D3Q99576 134 aa-5.88□□□□□ -3.35
RNU6-1340P-201ENST00000384438 GNG7O60262 68 aa-5.89□□□□□ -3.35
RNU6-1340P-201ENST00000384438 ABCA8O94911 1581 aa-5.9□□□□□ -3.35
RNU6-1340P-201ENST00000384438 A0A096LPF7 62 aa-5.91□□□□□ -3.36
RNU6-1340P-201ENST00000384438 TOP2AP11388 1531 aaKnown RBP-5.91□□□□□ -3.36
RNU6-1340P-201ENST00000384438 UGGT1Q9NYU2 1555 aa-5.92□□□□□ -3.36
RNU6-1340P-201ENST00000384438 IGIPA6NJ69 53 aa-5.92□□□□□ -3.36
RNU6-1340P-201ENST00000384438 SNAPC5O75971 98 aa-5.92□□□□□ -3.36
RNU6-1340P-201ENST00000384438 S100ZQ8WXG8 99 aa-5.92□□□□□ -3.36
RNU6-1340P-201ENST00000384438 TPM3P06753 285 aa-5.93□□□□□ -3.36
RNU6-1340P-201ENST00000384438 H3BUX3 64 aa-5.96□□□□□ -3.36
RNU6-1340P-201ENST00000384438 PDCD5O14737 125 aa-5.97□□□□□ -3.37
RNU6-1340P-201ENST00000384438 DLEU1O43261 78 aa-5.97□□□□□ -3.37
RNU6-1340P-201ENST00000384438 HTN3P15516 51 aa-5.97□□□□□ -3.37
RNU6-1340P-201ENST00000384438 PPP3R1P63098 170 aa-5.97□□□□□ -3.37
RNU6-1340P-201ENST00000384438 H0YGX0 51 aa-5.98□□□□□ -3.37
RNU6-1340P-201ENST00000384438 NDUFA2O43678 99 aa-5.98□□□□□ -3.37
RNU6-1340P-201ENST00000384438 CCDC18Q5T9S5 1454 aa-5.98□□□□□ -3.37
RNU6-1340P-201ENST00000384438 GNG4P50150 75 aa-6□□□□□ -3.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms