RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 NOTCH2NLQ7Z3S9 236 aa7.34□□□□□ -1.23
SMARCA4-217ENST00000591595 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
SMARCA4-217ENST00000591595 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
SMARCA4-217ENST00000591595 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
SMARCA4-217ENST00000591595 ALMS1Q8TCU4 4167 aa7.32□□□□□ -1.24
SMARCA4-217ENST00000591595 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
SMARCA4-217ENST00000591595 A8MUU9 505 aa7.32□□□□□ -1.24
SMARCA4-217ENST00000591595 CSMD3Q7Z407 3707 aa7.3□□□□□ -1.24
SMARCA4-217ENST00000591595 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
SMARCA4-217ENST00000591595 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
SMARCA4-217ENST00000591595 SPRR1BP22528 89 aa7.26□□□□□ -1.25
SMARCA4-217ENST00000591595 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
SMARCA4-217ENST00000591595 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
SMARCA4-217ENST00000591595 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
SMARCA4-217ENST00000591595 PANO1I0J062 215 aa7.24□□□□□ -1.25
SMARCA4-217ENST00000591595 APLNQ9ULZ1 77 aa7.24□□□□□ -1.25
SMARCA4-217ENST00000591595 CDK2AP2O75956 126 aa7.23□□□□□ -1.25
SMARCA4-217ENST00000591595 NDUFAF8A1L188 74 aa7.21□□□□□ -1.25
SMARCA4-217ENST00000591595 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
SMARCA4-217ENST00000591595 NBDYA0A0U1RRE5 68 aa7.21□□□□□ -1.26
SMARCA4-217ENST00000591595 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
SMARCA4-217ENST00000591595 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
SMARCA4-217ENST00000591595 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
SMARCA4-217ENST00000591595 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
SMARCA4-217ENST00000591595 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
SMARCA4-217ENST00000591595 DNAH1Q9P2D7 4330 aa7.18□□□□□ -1.26
SMARCA4-217ENST00000591595 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
SMARCA4-217ENST00000591595 LYSTQ99698 3801 aa7.18□□□□□ -1.26
SMARCA4-217ENST00000591595 ANAPC11Q9NYG5 84 aa7.17□□□□□ -1.26
SMARCA4-217ENST00000591595 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
SMARCA4-217ENST00000591595 SPINK6Q6UWN8 80 aa7.16□□□□□ -1.26
SMARCA4-217ENST00000591595 Q96NJ1 140 aa7.15□□□□□ -1.27
SMARCA4-217ENST00000591595 CRIPTQ9P021 101 aa7.15□□□□□ -1.27
SMARCA4-217ENST00000591595 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
SMARCA4-217ENST00000591595 Q5W150 140 aa7.14□□□□□ -1.27
SMARCA4-217ENST00000591595 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
SMARCA4-217ENST00000591595 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
SMARCA4-217ENST00000591595 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
SMARCA4-217ENST00000591595 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
SMARCA4-217ENST00000591595 NUPR2A6NF83 97 aa7.11□□□□□ -1.27
SMARCA4-217ENST00000591595 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
SMARCA4-217ENST00000591595 DNAH3Q8TD57 4116 aa7.1□□□□□ -1.27
SMARCA4-217ENST00000591595 Q6ZRN7 208 aaPredicted RBP7.1□□□□□ -1.27
SMARCA4-217ENST00000591595 KRTAP13-3Q3SY46 172 aa7.09□□□□□ -1.27
SMARCA4-217ENST00000591595 SSBP3-AS1Q7Z2R9 100 aa7.09□□□□□ -1.27
SMARCA4-217ENST00000591595 A0A087WTM6 91 aa7.08□□□□□ -1.28
SMARCA4-217ENST00000591595 WWC2-AS2Q96NR7 200 aa7.08□□□□□ -1.28
SMARCA4-217ENST00000591595 CIRBP-AS1Q8TBR5 109 aa7.06□□□□□ -1.28
SMARCA4-217ENST00000591595 H0YAA0 97 aa7.03□□□□□ -1.28
SMARCA4-217ENST00000591595 LY6G6CO95867 125 aa7□□□□□ -1.29
SMARCA4-217ENST00000591595 TGP01266 2768 aa7□□□□□ -1.29
SMARCA4-217ENST00000591595 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
SMARCA4-217ENST00000591595 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
SMARCA4-217ENST00000591595 KRTAP15-1Q3LI76 137 aa6.98□□□□□ -1.29
SMARCA4-217ENST00000591595 PLECQ15149 4684 aaKnown RBP6.98□□□□□ -1.29
SMARCA4-217ENST00000591595 Q6ZSA8 131 aa6.97□□□□□ -1.29
SMARCA4-217ENST00000591595 SPINK1P00995 79 aa6.92□□□□□ -1.3
SMARCA4-217ENST00000591595 IGKV2-30P06310 120 aa6.91□□□□□ -1.3
SMARCA4-217ENST00000591595 K7ERS5 55 aa6.89□□□□□ -1.31
SMARCA4-217ENST00000591595 MEGF8Q7Z7M0 2845 aa6.89□□□□□ -1.31
SMARCA4-217ENST00000591595 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
SMARCA4-217ENST00000591595 FBN3Q75N90 2809 aa6.86□□□□□ -1.31
SMARCA4-217ENST00000591595 FRAS1Q86XX4 4008 aa6.86□□□□□ -1.31
SMARCA4-217ENST00000591595 A0A1B0GU33 70 aa6.85□□□□□ -1.31
SMARCA4-217ENST00000591595 DNAH8Q96JB1 4490 aa6.85□□□□□ -1.31
SMARCA4-217ENST00000591595 STARD9Q9P2P6 4700 aa6.83□□□□□ -1.32
SMARCA4-217ENST00000591595 IGKV2D-30A0A075B6S6 120 aa6.83□□□□□ -1.32
SMARCA4-217ENST00000591595 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
SMARCA4-217ENST00000591595 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
SMARCA4-217ENST00000591595 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
SMARCA4-217ENST00000591595 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
SMARCA4-217ENST00000591595 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
SMARCA4-217ENST00000591595 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
SMARCA4-217ENST00000591595 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
SMARCA4-217ENST00000591595 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
SMARCA4-217ENST00000591595 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
SMARCA4-217ENST00000591595 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
SMARCA4-217ENST00000591595 HECTD4Q9Y4D8 3996 aa6.75□□□□□ -1.33
SMARCA4-217ENST00000591595 DNAH2Q9P225 4427 aa6.73□□□□□ -1.33
SMARCA4-217ENST00000591595 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
SMARCA4-217ENST00000591595 PRKDCP78527 4128 aaKnown RBP6.72□□□□□ -1.33
SMARCA4-217ENST00000591595 KRTAP10-1P60331 282 aa6.71□□□□□ -1.34
SMARCA4-217ENST00000591595 Q8N1X5 172 aa6.7□□□□□ -1.34
SMARCA4-217ENST00000591595 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
SMARCA4-217ENST00000591595 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
SMARCA4-217ENST00000591595 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
SMARCA4-217ENST00000591595 LRP1BQ9NZR2 4599 aa6.6□□□□□ -1.35
SMARCA4-217ENST00000591595 COX6B2Q6YFQ2 88 aa6.59□□□□□ -1.35
SMARCA4-217ENST00000591595 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
SMARCA4-217ENST00000591595 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
SMARCA4-217ENST00000591595 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
SMARCA4-217ENST00000591595 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
SMARCA4-217ENST00000591595 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
SMARCA4-217ENST00000591595 DNHD1Q96M86 4753 aa6.49□□□□□ -1.37
SMARCA4-217ENST00000591595 A0A0D9SG42 100 aa6.46□□□□□ -1.37
SMARCA4-217ENST00000591595 VPS13BQ7Z7G8 4022 aa6.46□□□□□ -1.38
SMARCA4-217ENST00000591595 HYDINQ4G0P3 5121 aa6.39□□□□□ -1.39
SMARCA4-217ENST00000591595 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
SMARCA4-217ENST00000591595 PKD1P98161 4303 aa6.36□□□□□ -1.39
SMARCA4-217ENST00000591595 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms