RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 TGP01266 2768 aa5.48□□□□□ -1.53
TVP23A-205ENST00000572428 Q8NBF4 154 aa5.48□□□□□ -1.53
TVP23A-205ENST00000572428 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
TVP23A-205ENST00000572428 Q6ZQY7 126 aa5.47□□□□□ -1.53
TVP23A-205ENST00000572428 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
TVP23A-205ENST00000572428 A0A1B0GVX0 72 aa5.46□□□□□ -1.54
TVP23A-205ENST00000572428 H0Y9P7 68 aa5.46□□□□□ -1.54
TVP23A-205ENST00000572428 SPANXA2-OT1Q8N9U9 137 aa5.46□□□□□ -1.54
TVP23A-205ENST00000572428 COX7BP24311 80 aa5.46□□□□□ -1.54
TVP23A-205ENST00000572428 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
TVP23A-205ENST00000572428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.45□□□□□ -1.54
TVP23A-205ENST00000572428 C9orf163Q8N9P6 203 aa5.45□□□□□ -1.54
TVP23A-205ENST00000572428 DNAH10Q8IVF4 4471 aa5.45□□□□□ -1.54
TVP23A-205ENST00000572428 IGLV8-61A0A075B6I0 122 aa5.45□□□□□ -1.54
TVP23A-205ENST00000572428 ZNF861PO60384 105 aa5.44□□□□□ -1.54
TVP23A-205ENST00000572428 LY6G6CO95867 125 aa5.44□□□□□ -1.54
TVP23A-205ENST00000572428 IGKV2-24A0A0C4DH68 120 aa5.43□□□□□ -1.54
TVP23A-205ENST00000572428 DNAH17Q9UFH2 4485 aa5.43□□□□□ -1.54
TVP23A-205ENST00000572428 HYDINQ4G0P3 5121 aa5.43□□□□□ -1.54
TVP23A-205ENST00000572428 C14orf177Q52M58 125 aa5.43□□□□□ -1.54
TVP23A-205ENST00000572428 KCNQ1DNQ9H478 68 aa5.42□□□□□ -1.54
TVP23A-205ENST00000572428 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
TVP23A-205ENST00000572428 SACSQ9NZJ4 4579 aa5.41□□□□□ -1.54
TVP23A-205ENST00000572428 SPRR4Q96PI1 79 aa5.4□□□□□ -1.54
TVP23A-205ENST00000572428 A0A087WSZ3 146 aa5.4□□□□□ -1.55
TVP23A-205ENST00000572428 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.55
TVP23A-205ENST00000572428 A0A087WTM6 91 aa5.39□□□□□ -1.55
TVP23A-205ENST00000572428 A0A096LNI7 61 aa5.39□□□□□ -1.55
TVP23A-205ENST00000572428 SRRM2Q9UQ35 2752 aaKnown RBP5.38□□□□□ -1.55
TVP23A-205ENST00000572428 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
TVP23A-205ENST00000572428 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
TVP23A-205ENST00000572428 IGLV1-50A0A075B6I6 118 aa5.37□□□□□ -1.55
TVP23A-205ENST00000572428 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
TVP23A-205ENST00000572428 A0A0G2JQZ4 141 aa5.37□□□□□ -1.55
TVP23A-205ENST00000572428 A0A1W2PNN7 141 aa5.37□□□□□ -1.55
TVP23A-205ENST00000572428 SPRR1AP35321 89 aa5.37□□□□□ -1.55
TVP23A-205ENST00000572428 HECTD4Q9Y4D8 3996 aa5.37□□□□□ -1.55
TVP23A-205ENST00000572428 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
TVP23A-205ENST00000572428 PKD1P98161 4303 aa5.35□□□□□ -1.55
TVP23A-205ENST00000572428 Q6ZRX8 168 aa5.35□□□□□ -1.55
TVP23A-205ENST00000572428 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
TVP23A-205ENST00000572428 DNAH11Q96DT5 4516 aa5.34□□□□□ -1.55
TVP23A-205ENST00000572428 DEFB116Q30KQ4 102 aa5.34□□□□□ -1.55
TVP23A-205ENST00000572428 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
TVP23A-205ENST00000572428 RYR2Q92736 4967 aa5.34□□□□□ -1.55
TVP23A-205ENST00000572428 PANO1I0J062 215 aa5.34□□□□□ -1.55
TVP23A-205ENST00000572428 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
TVP23A-205ENST00000572428 C1orf137Q5JT78 98 aa5.33□□□□□ -1.56
TVP23A-205ENST00000572428 H3BPC8 53 aa5.32□□□□□ -1.56
TVP23A-205ENST00000572428 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
TVP23A-205ENST00000572428 Q5W150 140 aa5.31□□□□□ -1.56
TVP23A-205ENST00000572428 Q8N377 158 aa5.31□□□□□ -1.56
TVP23A-205ENST00000572428 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
TVP23A-205ENST00000572428 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
TVP23A-205ENST00000572428 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
TVP23A-205ENST00000572428 DNAH5Q8TE73 4624 aa5.3□□□□□ -1.56
TVP23A-205ENST00000572428 KMT2CQ8NEZ4 4911 aaKnown RBP5.29□□□□□ -1.56
TVP23A-205ENST00000572428 PRLHP81277 87 aa5.29□□□□□ -1.56
TVP23A-205ENST00000572428 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
TVP23A-205ENST00000572428 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
TVP23A-205ENST00000572428 KRTAP10-2P60368 255 aa5.27□□□□□ -1.57
TVP23A-205ENST00000572428 DMAC1Q96GE9 116 aa5.27□□□□□ -1.57
TVP23A-205ENST00000572428 Q6ZSA8 131 aa5.27□□□□□ -1.57
TVP23A-205ENST00000572428 Q8N1X5 172 aa5.26□□□□□ -1.57
TVP23A-205ENST00000572428 UQCR11O14957 56 aa5.24□□□□□ -1.57
TVP23A-205ENST00000572428 LCE2BO14633 110 aa5.24□□□□□ -1.57
TVP23A-205ENST00000572428 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
TVP23A-205ENST00000572428 RYR3Q15413 4870 aa5.21□□□□□ -1.58
TVP23A-205ENST00000572428 KRTAP10-1P60331 282 aa5.21□□□□□ -1.58
TVP23A-205ENST00000572428 WFDC13Q8IUB5 93 aa5.21□□□□□ -1.58
TVP23A-205ENST00000572428 SPRR1BP22528 89 aa5.2□□□□□ -1.58
TVP23A-205ENST00000572428 HRES1P13985 223 aa5.2□□□□□ -1.58
TVP23A-205ENST00000572428 A0A1B0GU69 56 aa5.19□□□□□ -1.58
TVP23A-205ENST00000572428 Q96NJ1 140 aa5.19□□□□□ -1.58
TVP23A-205ENST00000572428 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
TVP23A-205ENST00000572428 DYNC1H1Q14204 4646 aaKnown RBP5.18□□□□□ -1.58
TVP23A-205ENST00000572428 RPL37AP61513 92 aaKnown RBP5.17□□□□□ -1.58
TVP23A-205ENST00000572428 KRTAP11-1Q8IUC1 163 aa5.17□□□□□ -1.58
TVP23A-205ENST00000572428 PKHD1P08F94 4074 aa5.17□□□□□ -1.58
TVP23A-205ENST00000572428 LINC00304Q8N9R0 145 aa5.16□□□□□ -1.58
TVP23A-205ENST00000572428 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
TVP23A-205ENST00000572428 KRTAP13-1Q8IUC0 172 aa5.16□□□□□ -1.58
TVP23A-205ENST00000572428 K7EQZ3 153 aa5.15□□□□□ -1.58
TVP23A-205ENST00000572428 LRP1BQ9NZR2 4599 aa5.15□□□□□ -1.59
TVP23A-205ENST00000572428 ANAPC11Q9NYG5 84 aa5.15□□□□□ -1.59
TVP23A-205ENST00000572428 DSCR10P59022 87 aa5.14□□□□□ -1.59
TVP23A-205ENST00000572428 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
TVP23A-205ENST00000572428 FLG2Q5D862 2391 aaPredicted RBP5.12□□□□□ -1.59
TVP23A-205ENST00000572428 TYMSOSQ8TAI1 123 aa5.11□□□□□ -1.59
TVP23A-205ENST00000572428 PSORS1C2Q9UIG4 136 aa5.11□□□□□ -1.59
TVP23A-205ENST00000572428 SPINK6Q6UWN8 80 aa5.1□□□□□ -1.59
TVP23A-205ENST00000572428 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
TVP23A-205ENST00000572428 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
TVP23A-205ENST00000572428 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
TVP23A-205ENST00000572428 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
TVP23A-205ENST00000572428 SSBP3-AS1Q7Z2R9 100 aa5.07□□□□□ -1.6
TVP23A-205ENST00000572428 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
TVP23A-205ENST00000572428 A0A1B0GU33 70 aa5.03□□□□□ -1.6
TVP23A-205ENST00000572428 HSPG2P98160 4391 aa5.02□□□□□ -1.61
TVP23A-205ENST00000572428 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms