RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 S100A16Q96FQ6 103 aaKnown RBP1.26□□□□□ -2.21
SMG1-204ENST00000561940 FXYD6-FXYD2A0A087WZ82 144 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 LOC101927531A0A1B0GV80 90 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 NDUFA1O15239 70 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 CCKP06307 115 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 IAPPP10997 89 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 FGF7P21781 194 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 PLAC4Q8WY50 150 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 SMIM3Q9BZL3 60 aa1.25□□□□□ -2.21
SMG1-204ENST00000561940 LSM2Q9Y333 95 aaKnown RBP1.25□□□□□ -2.21
SMG1-204ENST00000561940 F6UZH7 168 aa1.24□□□□□ -2.21
SMG1-204ENST00000561940 PYYP10082 97 aa1.24□□□□□ -2.21
SMG1-204ENST00000561940 ZNF56Q15929 161 aa1.24□□□□□ -2.21
SMG1-204ENST00000561940 FAM167A-AS1Q96KT0 104 aa1.24□□□□□ -2.21
SMG1-204ENST00000561940 MGST2Q99735 147 aa1.24□□□□□ -2.21
SMG1-204ENST00000561940 M0QY20 66 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 NCR2O95944 276 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 RRAS2P62070 204 aaPredicted RBP1.23□□□□□ -2.21
SMG1-204ENST00000561940 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 MIC13Q5XKP0 118 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 LINC00208Q96KT6 92 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 SPRR4Q96PI1 79 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 PSENENQ9NZ42 101 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 ARL2-SNX15V9GYD0 113 aa1.23□□□□□ -2.21
SMG1-204ENST00000561940 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
SMG1-204ENST00000561940 SMIM31A0A1B0GVY4 71 aa1.22□□□□□ -2.21
SMG1-204ENST00000561940 H3BVH4 76 aa1.22□□□□□ -2.21
SMG1-204ENST00000561940 KRTAP8-1Q8IUC2 63 aa1.22□□□□□ -2.21
SMG1-204ENST00000561940 TMEM242Q9NWH2 141 aa1.22□□□□□ -2.21
SMG1-204ENST00000561940 SCN3BQ9NY72 215 aa1.22□□□□□ -2.21
SMG1-204ENST00000561940 TEX49A0A1B0GTD5 131 aa1.21□□□□□ -2.22
SMG1-204ENST00000561940 IGLC6P0CF74 106 aa1.21□□□□□ -2.22
SMG1-204ENST00000561940 C5orf38Q86SI9 138 aa1.21□□□□□ -2.22
SMG1-204ENST00000561940 CDC42SE2Q9NRR3 84 aa1.21□□□□□ -2.22
SMG1-204ENST00000561940 CCDC179H3BU77 68 aa1.2□□□□□ -2.22
SMG1-204ENST00000561940 MT1BP07438 61 aa1.2□□□□□ -2.22
SMG1-204ENST00000561940 PRLHP81277 87 aa1.2□□□□□ -2.22
SMG1-204ENST00000561940 Q5VV11 94 aa1.2□□□□□ -2.22
SMG1-204ENST00000561940 C8orf59Q8N0T1 100 aaPredicted RBP1.2□□□□□ -2.22
SMG1-204ENST00000561940 ERG28Q9UKR5 140 aa1.2□□□□□ -2.22
SMG1-204ENST00000561940 UBE2L3P68036 154 aaKnown RBP1.19□□□□□ -2.22
SMG1-204ENST00000561940 KLKP1Q107X0 134 aa1.19□□□□□ -2.22
SMG1-204ENST00000561940 SPANXN1Q5VSR9 72 aa1.19□□□□□ -2.22
SMG1-204ENST00000561940 K7ERU9 68 aa1.18□□□□□ -2.22
SMG1-204ENST00000561940 MT4P47944 62 aa1.18□□□□□ -2.22
SMG1-204ENST00000561940 CRIP1P50238 77 aa1.18□□□□□ -2.22
SMG1-204ENST00000561940 SSBP1Q04837 148 aaKnown RBP1.18□□□□□ -2.22
SMG1-204ENST00000561940 KRTAP19-8Q3LI54 63 aa1.18□□□□□ -2.22
SMG1-204ENST00000561940 SSSCA1O60232 199 aa1.17□□□□□ -2.22
SMG1-204ENST00000561940 SPATA8Q6RVD6 105 aa1.17□□□□□ -2.22
SMG1-204ENST00000561940 FAM107BQ9H098 131 aa1.17□□□□□ -2.22
SMG1-204ENST00000561940 SCP2D1Q9UJQ7 156 aa1.17□□□□□ -2.22
SMG1-204ENST00000561940 FAM236AA0A1B0GUQ0 79 aa1.16□□□□□ -2.22
SMG1-204ENST00000561940 FAM236BA0A1B0GV22 79 aa1.16□□□□□ -2.22
SMG1-204ENST00000561940 I3L3M4 83 aa1.16□□□□□ -2.22
SMG1-204ENST00000561940 S100A12P80511 92 aa1.16□□□□□ -2.22
SMG1-204ENST00000561940 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
SMG1-204ENST00000561940 A0A0D9SG42 100 aa1.15□□□□□ -2.23
SMG1-204ENST00000561940 MGPP08493 103 aa1.15□□□□□ -2.23
SMG1-204ENST00000561940 AKAIN1P0CW23 69 aa1.15□□□□□ -2.23
SMG1-204ENST00000561940 MRPS10P82664 201 aaKnown RBP1.15□□□□□ -2.23
SMG1-204ENST00000561940 TMEM141Q96I45 108 aa1.15□□□□□ -2.23
SMG1-204ENST00000561940 UBE2L5PA0A1B0GUS4 154 aa1.14□□□□□ -2.23
SMG1-204ENST00000561940 C7orf77A4D0Y5 90 aa1.14□□□□□ -2.23
SMG1-204ENST00000561940 F2Z2F3 143 aa1.14□□□□□ -2.23
SMG1-204ENST00000561940 SFT2D2O95562 160 aa1.14□□□□□ -2.23
SMG1-204ENST00000561940 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
SMG1-204ENST00000561940 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
SMG1-204ENST00000561940 F8VRH5 84 aa1.13□□□□□ -2.23
SMG1-204ENST00000561940 C9orf153Q5TBE3 101 aa1.13□□□□□ -2.23
SMG1-204ENST00000561940 PSMG3Q9BT73 122 aaPredicted RBP1.13□□□□□ -2.23
SMG1-204ENST00000561940 SPRR2GQ9BYE4 73 aa1.13□□□□□ -2.23
SMG1-204ENST00000561940 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
SMG1-204ENST00000561940 RBM3P98179 157 aaKnown RBP1.12□□□□□ -2.23
SMG1-204ENST00000561940 Q8IZM0 81 aa1.12□□□□□ -2.23
SMG1-204ENST00000561940 TMEM167BQ9NRX6 74 aa1.12□□□□□ -2.23
SMG1-204ENST00000561940 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
SMG1-204ENST00000561940 SPRR1AP35321 89 aa1.11□□□□□ -2.23
SMG1-204ENST00000561940 POLR2KP53803 58 aaKnown RBP1.11□□□□□ -2.23
SMG1-204ENST00000561940 LINC01545Q5VT33 79 aa1.11□□□□□ -2.23
SMG1-204ENST00000561940 ALKAL2Q6UX46 152 aa1.11□□□□□ -2.23
SMG1-204ENST00000561940 DSCR8Q96T75 97 aa1.11□□□□□ -2.23
SMG1-204ENST00000561940 TCEAL7Q9BRU2 100 aa1.11□□□□□ -2.23
SMG1-204ENST00000561940 ST20Q9HBF5 79 aa1.11□□□□□ -2.23
SMG1-204ENST00000561940 FAM25AB3EWG3 89 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 FAM25CB3EWG5 89 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 FAM25GB3EWG6 89 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 GCHFRP30047 84 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 FCER1GP30273 86 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 FAUP35544 74 aaKnown RBP1.1□□□□□ -2.23
SMG1-204ENST00000561940 UBE2G1P62253 170 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 C9orf62Q8N4C0 152 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 SMIM4Q8WVI0 70 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 KCNQ1DNQ9H478 68 aa1.1□□□□□ -2.23
SMG1-204ENST00000561940 ETDCA0A1B0GVM5 59 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 PPP1R17O96001 155 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 Q6ZUT4 128 aa1.09□□□□□ -2.23
SMG1-204ENST00000561940 IFI27L1Q96BM0 104 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms