RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 Q6ZRX8 168 aa1.8□□□□□ -2.12
PCNX4-212ENST00000556360 FAM19A5Q7Z5A7 132 aaPredicted RBP1.8□□□□□ -2.12
PCNX4-212ENST00000556360 C3orf56Q8N813 242 aa1.8□□□□□ -2.12
PCNX4-212ENST00000556360 XAGE1AQ9HD64 81 aa1.8□□□□□ -2.12
PCNX4-212ENST00000556360 F8P00451 2351 aa1.8□□□□□ -2.12
PCNX4-212ENST00000556360 DYNC2H1Q8NCM8 4307 aaKnown RBP1.79□□□□□ -2.12
PCNX4-212ENST00000556360 PSPHP1O15172 72 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 HTN3P15516 51 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 ESRGQ1W209 222 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 Q5XG85 94 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 ADM2Q7Z4H4 148 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 C20orf197Q8N268 126 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 SPRR4Q96PI1 79 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 SERP1Q9Y6X1 66 aa1.79□□□□□ -2.12
PCNX4-212ENST00000556360 COL7A1Q02388 2944 aa1.78□□□□□ -2.12
PCNX4-212ENST00000556360 TRAV10A0A0B4J240 114 aa1.78□□□□□ -2.12
PCNX4-212ENST00000556360 HAMPP81172 84 aa1.78□□□□□ -2.12
PCNX4-212ENST00000556360 NREPQ16612 68 aa1.78□□□□□ -2.12
PCNX4-212ENST00000556360 DEFB131BA0A096LNP1 70 aa1.77□□□□□ -2.13
PCNX4-212ENST00000556360 A0A1W2PNM2 257 aa1.77□□□□□ -2.13
PCNX4-212ENST00000556360 FUSP35637 526 aaKnown RBP eCLIP1.77□□□□□ -2.13
PCNX4-212ENST00000556360 CNBPP62633 177 aaKnown RBP1.77□□□□□ -2.13
PCNX4-212ENST00000556360 TMEM254Q8TBM7 123 aa1.77□□□□□ -2.13
PCNX4-212ENST00000556360 Q9BRP9 147 aa1.77□□□□□ -2.13
PCNX4-212ENST00000556360 COL6A5A8TX70 2615 aa1.77□□□□□ -2.13
PCNX4-212ENST00000556360 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
PCNX4-212ENST00000556360 HRES1P13985 223 aa1.76□□□□□ -2.13
PCNX4-212ENST00000556360 C1orf137Q5JT78 98 aa1.76□□□□□ -2.13
PCNX4-212ENST00000556360 LINC00588Q9Y4M8 146 aa1.76□□□□□ -2.13
PCNX4-212ENST00000556360 R4GN34 69 aa1.76□□□□□ -2.13
PCNX4-212ENST00000556360 MGAM2Q2M2H8 2515 aa1.76□□□□□ -2.13
PCNX4-212ENST00000556360 ETDCA0A1B0GVM5 59 aa1.75□□□□□ -2.13
PCNX4-212ENST00000556360 F8WEM9 126 aa1.75□□□□□ -2.13
PCNX4-212ENST00000556360 SPRR1BP22528 89 aa1.75□□□□□ -2.13
PCNX4-212ENST00000556360 FP248Q71RG6 208 aaPredicted RBP1.75□□□□□ -2.13
PCNX4-212ENST00000556360 PKIGQ9Y2B9 76 aa1.75□□□□□ -2.13
PCNX4-212ENST00000556360 TENM2Q9NT68 2774 aa1.75□□□□□ -2.13
PCNX4-212ENST00000556360 SRRM2Q9UQ35 2752 aaKnown RBP1.74□□□□□ -2.13
PCNX4-212ENST00000556360 IGHV6-1A0A0B4J1U7 121 aa1.74□□□□□ -2.13
PCNX4-212ENST00000556360 C3orf84H3BNL1 204 aa1.74□□□□□ -2.13
PCNX4-212ENST00000556360 SCXQ7RTU7 201 aa1.74□□□□□ -2.13
PCNX4-212ENST00000556360 CYP4F30PQ9H0H9 118 aa1.74□□□□□ -2.13
PCNX4-212ENST00000556360 SNURFQ9Y675 71 aa1.74□□□□□ -2.13
PCNX4-212ENST00000556360 VPS13DQ5THJ4 4388 aa1.74□□□□□ -2.13
PCNX4-212ENST00000556360 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 DNAH9Q9NYC9 4486 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 HCG22E2RYF7 251 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 H3BPC8 53 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 K7EQZ3 153 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 C4orf26Q17RF5 130 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 LYSTQ99698 3801 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 PRO0628Q9UI54 55 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 DNAH7Q8WXX0 4024 aa1.73□□□□□ -2.13
PCNX4-212ENST00000556360 A0A096LNI7 61 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 hDV103S1A0JD37 113 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 K7EIL1 84 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 PSCAO43653 123 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 NDUFB1O75438 58 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 RPL37AP61513 92 aaKnown RBP1.72□□□□□ -2.13
PCNX4-212ENST00000556360 UBE2BP63146 152 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 ASB16-AS1Q495Z4 193 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 HRCT1Q6UXD1 115 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 PRKDCP78527 4128 aaKnown RBP1.72□□□□□ -2.13
PCNX4-212ENST00000556360 CSMD3Q7Z407 3707 aa1.72□□□□□ -2.13
PCNX4-212ENST00000556360 HECTD4Q9Y4D8 3996 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 DNAH6Q9C0G6 4158 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 A8MWP4 228 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 Q1T7F1 81 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
PCNX4-212ENST00000556360 C9orf163Q8N9P6 203 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 DEFB105AQ8NG35 78 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 HIGD2AQ9BW72 106 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 LINC00472Q9H8W2 130 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 APLNQ9ULZ1 77 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 DNAH17Q9UFH2 4485 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 FBN3Q75N90 2809 aa1.71□□□□□ -2.14
PCNX4-212ENST00000556360 PLECQ15149 4684 aaKnown RBP1.7□□□□□ -2.14
PCNX4-212ENST00000556360 A0A087WSZ3 146 aa1.7□□□□□ -2.14
PCNX4-212ENST00000556360 TRAV22A0A0B4J277 110 aa1.7□□□□□ -2.14
PCNX4-212ENST00000556360 MP68P56378 58 aa1.7□□□□□ -2.14
PCNX4-212ENST00000556360 PRLHP81277 87 aa1.7□□□□□ -2.14
PCNX4-212ENST00000556360 LINC00336Q6ZUF6 198 aa1.7□□□□□ -2.14
PCNX4-212ENST00000556360 PRR15Q8IV56 129 aa1.7□□□□□ -2.14
PCNX4-212ENST00000556360 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 FAM229BQ4G0N7 80 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 CASC2Q6XLA1 102 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 SPACA4Q8TDM5 124 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 Q96NJ1 140 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 B9D2Q9BPU9 175 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 MEGF8Q7Z7M0 2845 aa1.69□□□□□ -2.14
PCNX4-212ENST00000556360 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
PCNX4-212ENST00000556360 NBDYA0A0U1RRE5 68 aa1.68□□□□□ -2.14
PCNX4-212ENST00000556360 NUPR2A6NF83 97 aa1.68□□□□□ -2.14
PCNX4-212ENST00000556360 C1orf195Q5TG92 126 aa1.68□□□□□ -2.14
PCNX4-212ENST00000556360 TP53AIP1Q9HCN2 124 aa1.68□□□□□ -2.14
PCNX4-212ENST00000556360 ZNF706Q9Y5V0 76 aaPredicted RBP1.68□□□□□ -2.14
PCNX4-212ENST00000556360 V9GYY9 64 aa1.68□□□□□ -2.14
PCNX4-212ENST00000556360 STARD9Q9P2P6 4700 aa1.68□□□□□ -2.14
PCNX4-212ENST00000556360 DNAH2Q9P225 4427 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms