RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 A0A0D9SG42 100 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 TEX49A0A1B0GTD5 131 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 C17orf112F2Z3M2 114 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 SIX6O95475 246 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 SPINK8P0C7L1 97 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 GCHFRP30047 84 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 S100A11P31949 105 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 IFI27P40305 119 aaPredicted RBP0.38□□□□□ -2.35
RAP1B-224ENST00000541216 LYRM7Q5U5X0 104 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 TMEM141Q96I45 108 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 DSCR8Q96T75 97 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 PRRT1Q99946 306 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 SMIM2Q9BVW6 85 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 CDC42SE1Q9NRR8 79 aa0.38□□□□□ -2.35
RAP1B-224ENST00000541216 A0A1W2PPM0 123 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 F2Z2F3 143 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 SFT2D2O95562 160 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 LINC00158P58513 81 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 SMIM15Q7Z3B0 74 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 TMEM229BQ8NBD8 167 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 CLEC2BQ92478 149 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 NXT2Q9NPJ8 142 aaKnown RBP0.37□□□□□ -2.35
RAP1B-224ENST00000541216 OSTCQ9NRP0 149 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 TNFSF18Q9UNG2 199 aa0.37□□□□□ -2.35
RAP1B-224ENST00000541216 SMIM31A0A1B0GVY4 71 aa0.36□□□□□ -2.35
RAP1B-224ENST00000541216 M0QZ58 72 aa0.36□□□□□ -2.35
RAP1B-224ENST00000541216 TMEM128Q5BJH2 165 aa0.36□□□□□ -2.35
RAP1B-224ENST00000541216 PSMG3Q9BT73 122 aaPredicted RBP0.36□□□□□ -2.35
RAP1B-224ENST00000541216 TMEM167BQ9NRX6 74 aa0.36□□□□□ -2.35
RAP1B-224ENST00000541216 A0A1W2PRE2 83 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 K7EQZ3 153 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 C3orf79P0CE67 100 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 AKAIN1P0CW23 69 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 COX17Q14061 63 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 S100A7L2Q5SY68 101 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 BAGE2Q86Y30 109 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 C8orf59Q8N0T1 100 aaPredicted RBP0.35□□□□□ -2.35
RAP1B-224ENST00000541216 SS18L2Q9UHA2 77 aa0.35□□□□□ -2.35
RAP1B-224ENST00000541216 IGLV5-48A0A075B6I7 105 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 CCDC160A6NGH7 325 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 FAM25AB3EWG3 89 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 FAM25CB3EWG5 89 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 FAM25GB3EWG6 89 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 PPP1R17O96001 155 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 SEC11AP67812 179 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 Q6JHZ5 121 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 C9orf62Q8N4C0 152 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 C9orf16Q9BUW7 83 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 CNFNQ9BYD5 112 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 LINC00472Q9H8W2 130 aa0.34□□□□□ -2.36
RAP1B-224ENST00000541216 SMIM13P0DJ93 91 aa0.33□□□□□ -2.36
RAP1B-224ENST00000541216 SMIM3Q9BZL3 60 aa0.33□□□□□ -2.36
RAP1B-224ENST00000541216 CYSLTR1Q9Y271 337 aa0.33□□□□□ -2.36
RAP1B-224ENST00000541216 ZNF815PA8K554 130 aa0.32□□□□□ -2.36
RAP1B-224ENST00000541216 H3BUT2 72 aa0.32□□□□□ -2.36
RAP1B-224ENST00000541216 COX7BP24311 80 aa0.32□□□□□ -2.36
RAP1B-224ENST00000541216 ELOF1P60002 83 aaKnown RBP0.32□□□□□ -2.36
RAP1B-224ENST00000541216 MEIG1Q5JSS6 88 aa0.32□□□□□ -2.36
RAP1B-224ENST00000541216 SPATA8Q6RVD6 105 aa0.32□□□□□ -2.36
RAP1B-224ENST00000541216 TPRKBQ9Y3C4 175 aa0.32□□□□□ -2.36
RAP1B-224ENST00000541216 TRAV13-2A0A0B4J235 113 aa0.31□□□□□ -2.36
RAP1B-224ENST00000541216 H3BRM9 83 aa0.31□□□□□ -2.36
RAP1B-224ENST00000541216 RPL7L1Q6DKI1 246 aaKnown RBP0.31□□□□□ -2.36
RAP1B-224ENST00000541216 SMIM4Q8WVI0 70 aa0.31□□□□□ -2.36
RAP1B-224ENST00000541216 TCEAL7Q9BRU2 100 aa0.31□□□□□ -2.36
RAP1B-224ENST00000541216 A0A087WVE0 104 aa0.3□□□□□ -2.36
RAP1B-224ENST00000541216 BORCS7-ASMTA0A0B4J1R7 106 aa0.3□□□□□ -2.36
RAP1B-224ENST00000541216 LINC01546A6NGU7 62 aa0.3□□□□□ -2.36
RAP1B-224ENST00000541216 LSM3P62310 102 aaKnown RBP0.3□□□□□ -2.36
RAP1B-224ENST00000541216 SSBP1Q04837 148 aaKnown RBP0.3□□□□□ -2.36
RAP1B-224ENST00000541216 Q5BKY6 102 aa0.3□□□□□ -2.36
RAP1B-224ENST00000541216 BORCS7Q96B45 105 aa0.3□□□□□ -2.36
RAP1B-224ENST00000541216 C20orf78Q9BR46 151 aa0.3□□□□□ -2.36
RAP1B-224ENST00000541216 IGIPA6NJ69 53 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 PFDN1O60925 122 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 MT-ATP8P03928 68 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 CKS2P33552 79 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 VBP1P61758 197 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 MRPS10P82664 201 aaKnown RBP0.29□□□□□ -2.36
RAP1B-224ENST00000541216 OCIAD2Q56VL3 154 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 SFTA2Q6UW10 78 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 OR13C6PQ8NH95 151 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 HIST1H2BLQ99880 126 aa0.29□□□□□ -2.36
RAP1B-224ENST00000541216 hDV103S1A0JD37 113 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 MAP1LC3B2A6NCE7 125 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 LYRM1O43325 122 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 NDUFB6O95139 128 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 FAUP35544 74 aaKnown RBP0.28□□□□□ -2.36
RAP1B-224ENST00000541216 GNG4P50150 75 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 NPC2P61916 151 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 MAP1LC3BQ9GZQ8 125 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 C14orf132Q9NPU4 83 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 HSPB11Q9Y547 144 aa0.28□□□□□ -2.36
RAP1B-224ENST00000541216 CTXND1A0A1B0GTU2 59 aa0.27□□□□□ -2.37
RAP1B-224ENST00000541216 A0A1B0GUT8 65 aa0.27□□□□□ -2.37
RAP1B-224ENST00000541216 DNAL4O96015 105 aa0.27□□□□□ -2.37
RAP1B-224ENST00000541216 ADCYAP1P18509 176 aa0.27□□□□□ -2.37
RAP1B-224ENST00000541216 HIGD1CA8MV81 97 aa0.26□□□□□ -2.37
RAP1B-224ENST00000541216 HCG22E2RYF7 251 aa0.26□□□□□ -2.37
RAP1B-224ENST00000541216 NDUFC2O95298 119 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms