RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
TMEM39A-206ENST00000473684 ATMQ13315 3056 aa2.96□□□□□ -1.94
TMEM39A-206ENST00000473684 USP9YO00507 2555 aaPredicted RBP2.95□□□□□ -1.94
TMEM39A-206ENST00000473684 PRLHP81277 87 aa2.95□□□□□ -1.94
TMEM39A-206ENST00000473684 CEP295Q9C0D2 2601 aa2.94□□□□□ -1.94
TMEM39A-206ENST00000473684 K7EIL1 84 aa2.94□□□□□ -1.94
TMEM39A-206ENST00000473684 SSBP3-AS1Q7Z2R9 100 aa2.94□□□□□ -1.94
TMEM39A-206ENST00000473684 ASPMQ8IZT6 3477 aa2.94□□□□□ -1.94
TMEM39A-206ENST00000473684 H0YAA0 97 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 PANO1I0J062 215 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 ANAPC11Q9NYG5 84 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 H3BNG1 76 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 SPART-AS1P0CW21 52 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 TLN1Q9Y490 2541 aaKnown RBP2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 MAST4O15021 2626 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 DNHD1Q96M86 4753 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 MAPK1IP1LQ8NDC0 245 aa2.93□□□□□ -1.94
TMEM39A-206ENST00000473684 CELSR1Q9NYQ6 3014 aa2.92□□□□□ -1.94
TMEM39A-206ENST00000473684 LINC01556Q5JQF7 62 aa2.92□□□□□ -1.94
TMEM39A-206ENST00000473684 RELNP78509 3460 aa2.92□□□□□ -1.94
TMEM39A-206ENST00000473684 TENM2Q9NT68 2774 aa2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 HTN3P15516 51 aa2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 Q6ZSA8 131 aa2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 PSORS1C2Q9UIG4 136 aa2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 TLN2Q9Y4G6 2542 aa2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 USP9XQ93008 2570 aaPredicted RBP2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 NBASA2RRP1 2371 aa2.91□□□□□ -1.94
TMEM39A-206ENST00000473684 CSPG4Q6UVK1 2322 aa2.9□□□□□ -1.94
TMEM39A-206ENST00000473684 DNAH7Q8WXX0 4024 aa2.9□□□□□ -1.95
TMEM39A-206ENST00000473684 HIVEP1P15822 2718 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 DEFB4AO15263 64 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 SVEP1Q4LDE5 3571 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 TEX15Q9BXT5 2789 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 CELSR2Q9HCU4 2923 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 LAMA5O15230 3695 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 NF1P21359 2839 aa2.89□□□□□ -1.95
TMEM39A-206ENST00000473684 JMJD1CQ15652 2540 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 A0A096LNI7 61 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 A0A1B0GU33 70 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 CRIPTQ9P021 101 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 FLNCQ14315 2725 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 DEFB135Q30KP9 77 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
TMEM39A-206ENST00000473684 FN1P02751 2386 aaKnown RBP2.87□□□□□ -1.95
TMEM39A-206ENST00000473684 NSD1Q96L73 2696 aaPredicted RBP2.87□□□□□ -1.95
TMEM39A-206ENST00000473684 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
TMEM39A-206ENST00000473684 FASNP49327 2511 aaKnown RBP2.86□□□□□ -1.95
TMEM39A-206ENST00000473684 NBDYA0A0U1RRE5 68 aa2.86□□□□□ -1.95
TMEM39A-206ENST00000473684 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
TMEM39A-206ENST00000473684 UTP20O75691 2785 aaKnown RBP2.86□□□□□ -1.95
TMEM39A-206ENST00000473684 ITPR2Q14571 2701 aa2.85□□□□□ -1.95
TMEM39A-206ENST00000473684 MYO9AB2RTY4 2548 aa2.85□□□□□ -1.95
TMEM39A-206ENST00000473684 TPRXLQ17RH7 258 aa2.85□□□□□ -1.95
TMEM39A-206ENST00000473684 F8P00451 2351 aa2.84□□□□□ -1.95
TMEM39A-206ENST00000473684 ZFYVE26Q68DK2 2539 aa2.83□□□□□ -1.96
TMEM39A-206ENST00000473684 SMR3AQ99954 134 aa2.83□□□□□ -1.96
TMEM39A-206ENST00000473684 BIRC6Q9NR09 4857 aa2.83□□□□□ -1.96
TMEM39A-206ENST00000473684 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
TMEM39A-206ENST00000473684 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
TMEM39A-206ENST00000473684 CRYBG3Q68DQ2 2970 aa2.82□□□□□ -1.96
TMEM39A-206ENST00000473684 SPINK1P00995 79 aa2.82□□□□□ -1.96
TMEM39A-206ENST00000473684 CIRBP-AS1Q8TBR5 109 aa2.82□□□□□ -1.96
TMEM39A-206ENST00000473684 FLG2Q5D862 2391 aaPredicted RBP2.81□□□□□ -1.96
TMEM39A-206ENST00000473684 PRKDCP78527 4128 aaKnown RBP2.81□□□□□ -1.96
TMEM39A-206ENST00000473684 DNAH17Q9UFH2 4485 aa2.81□□□□□ -1.96
TMEM39A-206ENST00000473684 FBN1P35555 2871 aaKnown RBP2.81□□□□□ -1.96
TMEM39A-206ENST00000473684 COX6B2Q6YFQ2 88 aa2.8□□□□□ -1.96
TMEM39A-206ENST00000473684 ZNF469Q96JG9 3925 aaPredicted RBP2.8□□□□□ -1.96
TMEM39A-206ENST00000473684 LYSTQ99698 3801 aa2.8□□□□□ -1.96
TMEM39A-206ENST00000473684 ITPR3Q14573 2671 aa2.8□□□□□ -1.96
TMEM39A-206ENST00000473684 NBEAL2Q6ZNJ1 2754 aa2.8□□□□□ -1.96
TMEM39A-206ENST00000473684 SPINK6Q6UWN8 80 aa2.79□□□□□ -1.96
TMEM39A-206ENST00000473684 DNAH9Q9NYC9 4486 aa2.79□□□□□ -1.96
TMEM39A-206ENST00000473684 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
TMEM39A-206ENST00000473684 HECTD4Q9Y4D8 3996 aa2.79□□□□□ -1.96
TMEM39A-206ENST00000473684 HECTD1Q9ULT8 2610 aa2.78□□□□□ -1.96
TMEM39A-206ENST00000473684 RPL37P61927 97 aaKnown RBP2.78□□□□□ -1.96
TMEM39A-206ENST00000473684 SONP18583 2426 aaKnown RBP2.78□□□□□ -1.96
TMEM39A-206ENST00000473684 RYR2Q92736 4967 aa2.77□□□□□ -1.97
TMEM39A-206ENST00000473684 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
TMEM39A-206ENST00000473684 TRRAPQ9Y4A5 3859 aa2.76□□□□□ -1.97
TMEM39A-206ENST00000473684 NAV2Q8IVL1 2488 aa2.76□□□□□ -1.97
TMEM39A-206ENST00000473684 HIVEP2P31629 2446 aa2.76□□□□□ -1.97
TMEM39A-206ENST00000473684 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
TMEM39A-206ENST00000473684 MXRA5Q9NR99 2828 aa2.75□□□□□ -1.97
TMEM39A-206ENST00000473684 MTORP42345 2549 aa2.75□□□□□ -1.97
TMEM39A-206ENST00000473684 KRTAP10-3P60369 221 aa2.74□□□□□ -1.97
TMEM39A-206ENST00000473684 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
TMEM39A-206ENST00000473684 LRRK2Q5S007 2527 aa2.74□□□□□ -1.97
TMEM39A-206ENST00000473684 DNAH2Q9P225 4427 aa2.74□□□□□ -1.97
TMEM39A-206ENST00000473684 CSMD2Q7Z408 3487 aa2.74□□□□□ -1.97
TMEM39A-206ENST00000473684 HERC2O95714 4834 aa2.74□□□□□ -1.97
TMEM39A-206ENST00000473684 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
TMEM39A-206ENST00000473684 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
TMEM39A-206ENST00000473684 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
TMEM39A-206ENST00000473684 VPS13CQ709C8 3753 aa2.71□□□□□ -1.97
TMEM39A-206ENST00000473684 NIPBLQ6KC79 2804 aaeCLIP2.71□□□□□ -1.98
TMEM39A-206ENST00000473684 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
TMEM39A-206ENST00000473684 TEP1Q99973 2627 aaKnown RBP2.71□□□□□ -1.98
TMEM39A-206ENST00000473684 SACSQ9NZJ4 4579 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms