RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 FAM25AB3EWG3 89 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 FAM25CB3EWG5 89 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 FAM25GB3EWG6 89 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 ZNF56Q15929 161 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 PSENENQ9NZ42 101 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 NDUFA12Q9UI09 145 aa1.55□□□□□ -2.16
CUL3-208ENST00000454323 LOC101927531A0A1B0GV80 90 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 SSSCA1O60232 199 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 CCKP06307 115 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 GNGT1P63211 74 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 SPAG11AQ6PDA7 123 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 Q6ZQY7 126 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 FAM167A-AS1Q96KT0 104 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 SCN3BQ9NY72 215 aa1.54□□□□□ -2.16
CUL3-208ENST00000454323 BCE1O60756 84 aa1.53□□□□□ -2.16
CUL3-208ENST00000454323 ARMS2P0C7Q2 107 aa1.53□□□□□ -2.16
CUL3-208ENST00000454323 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
CUL3-208ENST00000454323 SPANXN1Q5VSR9 72 aa1.53□□□□□ -2.16
CUL3-208ENST00000454323 UBE2L5PA0A1B0GUS4 154 aa1.52□□□□□ -2.17
CUL3-208ENST00000454323 SMIM31A0A1B0GVY4 71 aa1.52□□□□□ -2.17
CUL3-208ENST00000454323 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
CUL3-208ENST00000454323 LINC00587B1AMM8 73 aa1.52□□□□□ -2.17
CUL3-208ENST00000454323 FGF7P21781 194 aa1.52□□□□□ -2.17
CUL3-208ENST00000454323 C2orf88Q9BSF0 95 aa1.52□□□□□ -2.17
CUL3-208ENST00000454323 LINC00959A0A1B0GUT2 108 aa1.51□□□□□ -2.17
CUL3-208ENST00000454323 SPRR2EP22531 72 aa1.51□□□□□ -2.17
CUL3-208ENST00000454323 SPRR2BP35325 72 aa1.51□□□□□ -2.17
CUL3-208ENST00000454323 SPRR2AP35326 72 aa1.51□□□□□ -2.17
CUL3-208ENST00000454323 SPAG11BQ08648 103 aa1.51□□□□□ -2.17
CUL3-208ENST00000454323 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.5□□□□□ -2.17
CUL3-208ENST00000454323 PIGBOS1A0A0B4J2F0 54 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 SPINK1P00995 79 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 MEIG1Q5JSS6 88 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 IFI27L1Q96BM0 104 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 LINC00208Q96KT6 92 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 TMEM242Q9NWH2 141 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 C6orf48Q9UBA6 75 aa1.5□□□□□ -2.17
CUL3-208ENST00000454323 TRBV30A0A0K0K1B3 111 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 M0QY20 66 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 NDUFA1O15239 70 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 MGPP08493 103 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 PRLHP81277 87 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 C5orf38Q86SI9 138 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 TMEM141Q96I45 108 aa1.49□□□□□ -2.17
CUL3-208ENST00000454323 TEX49A0A1B0GTD5 131 aa1.48□□□□□ -2.17
CUL3-208ENST00000454323 NDUFB6O95139 128 aa1.48□□□□□ -2.17
CUL3-208ENST00000454323 AKAIN1P0CW23 69 aa1.48□□□□□ -2.17
CUL3-208ENST00000454323 Q86TA4 180 aa1.48□□□□□ -2.17
CUL3-208ENST00000454323 SEC11CQ9BY50 192 aa1.48□□□□□ -2.17
CUL3-208ENST00000454323 CRIP1P50238 77 aa1.47□□□□□ -2.17
CUL3-208ENST00000454323 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
CUL3-208ENST00000454323 COPS9Q8WXC6 57 aa1.47□□□□□ -2.17
CUL3-208ENST00000454323 SCP2D1Q9UJQ7 156 aa1.47□□□□□ -2.17
CUL3-208ENST00000454323 ARL2-SNX15V9GYD0 113 aa1.47□□□□□ -2.17
CUL3-208ENST00000454323 C20orf202A1L168 122 aa1.46□□□□□ -2.18
CUL3-208ENST00000454323 SFT2D2O95562 160 aa1.46□□□□□ -2.18
CUL3-208ENST00000454323 SPRR2DP22532 72 aa1.46□□□□□ -2.18
CUL3-208ENST00000454323 NPC2P61916 151 aa1.46□□□□□ -2.18
CUL3-208ENST00000454323 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
CUL3-208ENST00000454323 SPRR4Q96PI1 79 aa1.46□□□□□ -2.18
CUL3-208ENST00000454323 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
CUL3-208ENST00000454323 SSBP1Q04837 148 aaKnown RBP1.45□□□□□ -2.18
CUL3-208ENST00000454323 SMIM4Q8WVI0 70 aa1.45□□□□□ -2.18
CUL3-208ENST00000454323 CDC42SE2Q9NRR3 84 aa1.45□□□□□ -2.18
CUL3-208ENST00000454323 SERP1Q9Y6X1 66 aa1.45□□□□□ -2.18
CUL3-208ENST00000454323 UBE2G1P62253 170 aa1.44□□□□□ -2.18
CUL3-208ENST00000454323 SNCGO76070 127 aa1.43□□□□□ -2.18
CUL3-208ENST00000454323 MRPS10P82664 201 aaKnown RBP1.43□□□□□ -2.18
CUL3-208ENST00000454323 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
CUL3-208ENST00000454323 RPL39LQ96EH5 51 aaKnown RBP1.43□□□□□ -2.18
CUL3-208ENST00000454323 A0A1W2PPM0 123 aa1.42□□□□□ -2.18
CUL3-208ENST00000454323 GCHFRP30047 84 aa1.42□□□□□ -2.18
CUL3-208ENST00000454323 C7orf77A4D0Y5 90 aa1.41□□□□□ -2.18
CUL3-208ENST00000454323 I3L3M4 83 aa1.41□□□□□ -2.18
CUL3-208ENST00000454323 FAUP35544 74 aaKnown RBP1.41□□□□□ -2.18
CUL3-208ENST00000454323 RPL7L1Q6DKI1 246 aaKnown RBP1.41□□□□□ -2.18
CUL3-208ENST00000454323 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
CUL3-208ENST00000454323 PLAC4Q8WY50 150 aa1.41□□□□□ -2.18
CUL3-208ENST00000454323 FXYD6-FXYD2A0A087WZ82 144 aa1.4□□□□□ -2.19
CUL3-208ENST00000454323 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
CUL3-208ENST00000454323 C9orf153Q5TBE3 101 aa1.4□□□□□ -2.19
CUL3-208ENST00000454323 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
CUL3-208ENST00000454323 Q8N8P6 123 aa1.4□□□□□ -2.19
CUL3-208ENST00000454323 TOMM7Q9P0U1 55 aa1.4□□□□□ -2.19
CUL3-208ENST00000454323 TMEM167BQ9NRX6 74 aa1.39□□□□□ -2.19
CUL3-208ENST00000454323 FCER1GP30273 86 aa1.38□□□□□ -2.19
CUL3-208ENST00000454323 ELOF1P60002 83 aaKnown RBP1.38□□□□□ -2.19
CUL3-208ENST00000454323 TOMM5Q8N4H5 51 aa1.38□□□□□ -2.19
CUL3-208ENST00000454323 PPP1R1CQ8WVI7 109 aa1.38□□□□□ -2.19
CUL3-208ENST00000454323 TRBV10-3A0A0K0K1G6 114 aa1.37□□□□□ -2.19
CUL3-208ENST00000454323 BAGE2Q86Y30 109 aa1.37□□□□□ -2.19
CUL3-208ENST00000454323 C20orf197Q8N268 126 aa1.37□□□□□ -2.19
CUL3-208ENST00000454323 ST20Q9HBF5 79 aa1.37□□□□□ -2.19
CUL3-208ENST00000454323 F2Z2F3 143 aa1.36□□□□□ -2.19
CUL3-208ENST00000454323 F8VRH5 84 aa1.36□□□□□ -2.19
CUL3-208ENST00000454323 MT1BP07438 61 aa1.36□□□□□ -2.19
CUL3-208ENST00000454323 RPL39P62891 51 aaKnown RBP1.36□□□□□ -2.19
CUL3-208ENST00000454323 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms