RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
PSEN1-202ENST00000357710 CASC10Q5T4H9 136 aa6.78□□□□□ -1.32
PSEN1-202ENST00000357710 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
PSEN1-202ENST00000357710 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
PSEN1-202ENST00000357710 K7ERS5 55 aa6.75□□□□□ -1.33
PSEN1-202ENST00000357710 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
PSEN1-202ENST00000357710 C8orf17Q9NRJ1 99 aa6.74□□□□□ -1.33
PSEN1-202ENST00000357710 TLX1NBP0CAT3 122 aa6.73□□□□□ -1.33
PSEN1-202ENST00000357710 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
PSEN1-202ENST00000357710 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
PSEN1-202ENST00000357710 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.33
PSEN1-202ENST00000357710 CHTF8P0CG12 524 aa6.71□□□□□ -1.34
PSEN1-202ENST00000357710 Q5W150 140 aa6.71□□□□□ -1.34
PSEN1-202ENST00000357710 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
PSEN1-202ENST00000357710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
PSEN1-202ENST00000357710 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
PSEN1-202ENST00000357710 LINC01556Q5JQF7 62 aa6.69□□□□□ -1.34
PSEN1-202ENST00000357710 C15orf56Q8N910 161 aa6.68□□□□□ -1.34
PSEN1-202ENST00000357710 TGP01266 2768 aa6.67□□□□□ -1.34
PSEN1-202ENST00000357710 STAB2Q8WWQ8 2551 aa6.67□□□□□ -1.34
PSEN1-202ENST00000357710 SPRR1BP22528 89 aa6.67□□□□□ -1.34
PSEN1-202ENST00000357710 SPINT4Q6UDR6 99 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 MEGF8Q7Z7M0 2845 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 IGLV9-49A0A0B4J1Y8 123 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 A0A0G2JQZ4 141 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 A0A1W2PNN7 141 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 APLNQ9ULZ1 77 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
PSEN1-202ENST00000357710 A0A087WTM6 91 aa6.65□□□□□ -1.34
PSEN1-202ENST00000357710 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.34
PSEN1-202ENST00000357710 UBE2DNLQ8IWF7 75 aa6.64□□□□□ -1.35
PSEN1-202ENST00000357710 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
PSEN1-202ENST00000357710 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
PSEN1-202ENST00000357710 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
PSEN1-202ENST00000357710 LY6G6CO95867 125 aa6.63□□□□□ -1.35
PSEN1-202ENST00000357710 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
PSEN1-202ENST00000357710 Q96NJ1 140 aa6.6□□□□□ -1.35
PSEN1-202ENST00000357710 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
PSEN1-202ENST00000357710 WWC2-AS2Q96NR7 200 aa6.58□□□□□ -1.36
PSEN1-202ENST00000357710 ANAPC11Q9NYG5 84 aa6.58□□□□□ -1.36
PSEN1-202ENST00000357710 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
PSEN1-202ENST00000357710 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
PSEN1-202ENST00000357710 PANO1I0J062 215 aa6.54□□□□□ -1.36
PSEN1-202ENST00000357710 SSBP3-AS1Q7Z2R9 100 aa6.54□□□□□ -1.36
PSEN1-202ENST00000357710 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
PSEN1-202ENST00000357710 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
PSEN1-202ENST00000357710 H0YAA0 97 aa6.52□□□□□ -1.37
PSEN1-202ENST00000357710 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
PSEN1-202ENST00000357710 CSMD3Q7Z407 3707 aa6.5□□□□□ -1.37
PSEN1-202ENST00000357710 PSORS1C2Q9UIG4 136 aa6.49□□□□□ -1.37
PSEN1-202ENST00000357710 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
PSEN1-202ENST00000357710 PLECQ15149 4684 aaKnown RBP6.47□□□□□ -1.37
PSEN1-202ENST00000357710 FAM229AH3BQW9 127 aa6.46□□□□□ -1.37
PSEN1-202ENST00000357710 IGKV2-30P06310 120 aa6.46□□□□□ -1.37
PSEN1-202ENST00000357710 PRLHP81277 87 aa6.46□□□□□ -1.38
PSEN1-202ENST00000357710 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
PSEN1-202ENST00000357710 Q6ZSA8 131 aa6.46□□□□□ -1.38
PSEN1-202ENST00000357710 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
PSEN1-202ENST00000357710 LYSTQ99698 3801 aa6.44□□□□□ -1.38
PSEN1-202ENST00000357710 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
PSEN1-202ENST00000357710 TENM2Q9NT68 2774 aa6.42□□□□□ -1.38
PSEN1-202ENST00000357710 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
PSEN1-202ENST00000357710 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.38
PSEN1-202ENST00000357710 A0A1B0GU33 70 aa6.4□□□□□ -1.39
PSEN1-202ENST00000357710 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
PSEN1-202ENST00000357710 H1FX-AS1Q4G0G2 97 aa6.37□□□□□ -1.39
PSEN1-202ENST00000357710 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
PSEN1-202ENST00000357710 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
PSEN1-202ENST00000357710 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
PSEN1-202ENST00000357710 DNAH10Q8IVF4 4471 aa6.32□□□□□ -1.4
PSEN1-202ENST00000357710 A0A096LNI7 61 aa6.31□□□□□ -1.4
PSEN1-202ENST00000357710 KMT2AQ03164 3969 aa6.3□□□□□ -1.4
PSEN1-202ENST00000357710 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
PSEN1-202ENST00000357710 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
PSEN1-202ENST00000357710 DNAH2Q9P225 4427 aa6.24□□□□□ -1.41
PSEN1-202ENST00000357710 SPACA4Q8TDM5 124 aa6.23□□□□□ -1.41
PSEN1-202ENST00000357710 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
PSEN1-202ENST00000357710 SRRM2Q9UQ35 2752 aaKnown RBP6.22□□□□□ -1.41
PSEN1-202ENST00000357710 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.41
PSEN1-202ENST00000357710 LCE2BO14633 110 aa6.2□□□□□ -1.42
PSEN1-202ENST00000357710 KRTAP10-2P60368 255 aa6.2□□□□□ -1.42
PSEN1-202ENST00000357710 SPINK1P00995 79 aa6.2□□□□□ -1.42
PSEN1-202ENST00000357710 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
PSEN1-202ENST00000357710 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
PSEN1-202ENST00000357710 RPL37P61927 97 aaKnown RBP6.18□□□□□ -1.42
PSEN1-202ENST00000357710 SACSQ9NZJ4 4579 aa6.18□□□□□ -1.42
PSEN1-202ENST00000357710 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
PSEN1-202ENST00000357710 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
PSEN1-202ENST00000357710 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
PSEN1-202ENST00000357710 FAT2Q9NYQ8 4349 aa6.12□□□□□ -1.43
PSEN1-202ENST00000357710 KRTAP10-1P60331 282 aa6.12□□□□□ -1.43
PSEN1-202ENST00000357710 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
PSEN1-202ENST00000357710 FLG2Q5D862 2391 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-202ENST00000357710 DNAH11Q96DT5 4516 aa6.1□□□□□ -1.43
PSEN1-202ENST00000357710 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
PSEN1-202ENST00000357710 RYR2Q92736 4967 aa6.09□□□□□ -1.43
PSEN1-202ENST00000357710 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
PSEN1-202ENST00000357710 DNAH5Q8TE73 4624 aa6.07□□□□□ -1.44
PSEN1-202ENST00000357710 PKD1P98161 4303 aa6.07□□□□□ -1.44
PSEN1-202ENST00000357710 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms