RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 C6orf99Q4VX62 202 aa3.33□□□□□ -1.88
SHMT1-211ENST00000618902 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
SHMT1-211ENST00000618902 C7orf33Q8WU49 177 aa3.33□□□□□ -1.88
SHMT1-211ENST00000618902 DIRC1Q969H9 104 aa3.33□□□□□ -1.88
SHMT1-211ENST00000618902 M0R378 163 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 SYCNQ0VAF6 134 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 UNQ6190/PRO20217Q6UXQ8 127 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 SPACA4Q8TDM5 124 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 C6orf48Q9UBA6 75 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 LAMTOR3Q9UHA4 124 aa3.32□□□□□ -1.88
SHMT1-211ENST00000618902 TRAV23DV6A0A075B6W5 121 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 A0A096LNI7 61 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 KRTAP29-1A8MX34 341 aaPredicted RBP3.31□□□□□ -1.88
SHMT1-211ENST00000618902 NCR3O14931 201 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 NDUFC1O43677 76 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 SMR3BP02814 79 aaPredicted RBP3.31□□□□□ -1.88
SHMT1-211ENST00000618902 COX7BP24311 80 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 C9orf116Q5BN46 136 aaPredicted RBP3.31□□□□□ -1.88
SHMT1-211ENST00000618902 Q6ZQT0 140 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 DPH3Q96FX2 82 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 PLA2G2DQ9UNK4 145 aa3.31□□□□□ -1.88
SHMT1-211ENST00000618902 TNXBP22105 4242 aa3.3□□□□□ -1.88
SHMT1-211ENST00000618902 J3KT08 172 aa3.3□□□□□ -1.88
SHMT1-211ENST00000618902 ZNF73O43830 326 aaPredicted RBP3.3□□□□□ -1.88
SHMT1-211ENST00000618902 ERC2-IT1O76042 136 aa3.3□□□□□ -1.88
SHMT1-211ENST00000618902 ELOF1P60002 83 aaKnown RBP3.3□□□□□ -1.88
SHMT1-211ENST00000618902 KRTAP10-4P60372 401 aaPredicted RBP3.3□□□□□ -1.88
SHMT1-211ENST00000618902 KRTAP7-1Q8IUC3 87 aa3.3□□□□□ -1.88
SHMT1-211ENST00000618902 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
SHMT1-211ENST00000618902 TRAV7A0A075B6U4 112 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 IGKV2-24A0A0C4DH68 120 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 TRBV7-4A0A0J9YYF1 115 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 A0A1W2PNN7 141 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 RPL37AP61513 92 aaKnown RBP3.29□□□□□ -1.88
SHMT1-211ENST00000618902 SERTAD4-AS1Q5TG53 156 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 KCNQ1DNQ9H478 68 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
SHMT1-211ENST00000618902 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
SHMT1-211ENST00000618902 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
SHMT1-211ENST00000618902 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
SHMT1-211ENST00000618902 PRR3P79522 188 aaKnown RBP3.28□□□□□ -1.88
SHMT1-211ENST00000618902 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
SHMT1-211ENST00000618902 Q6ZQY7 126 aa3.28□□□□□ -1.88
SHMT1-211ENST00000618902 Q6ZRP5 223 aa3.28□□□□□ -1.88
SHMT1-211ENST00000618902 IGLV5-37A0A075B6J1 123 aa3.27□□□□□ -1.89
SHMT1-211ENST00000618902 VPREB1P12018 145 aa3.27□□□□□ -1.89
SHMT1-211ENST00000618902 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
SHMT1-211ENST00000618902 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
SHMT1-211ENST00000618902 SPINK6Q6UWN8 80 aa3.27□□□□□ -1.89
SHMT1-211ENST00000618902 KRTAP11-1Q8IUC1 163 aa3.27□□□□□ -1.89
SHMT1-211ENST00000618902 IGLV5-48A0A075B6I7 105 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 C5orf47Q569G3 176 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 REG3GQ6UW15 175 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 Q6ZVQ6 151 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 Q8NDZ9 215 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 XAGE1AQ9HD64 81 aa3.26□□□□□ -1.89
SHMT1-211ENST00000618902 RPL37AP8A6NKH3 93 aa3.25□□□□□ -1.89
SHMT1-211ENST00000618902 PRYO14603 147 aa3.25□□□□□ -1.89
SHMT1-211ENST00000618902 NREPQ16612 68 aa3.25□□□□□ -1.89
SHMT1-211ENST00000618902 PHF5AQ7RTV0 110 aaKnown RBP3.25□□□□□ -1.89
SHMT1-211ENST00000618902 NKAPP1Q8N9T2 125 aa3.25□□□□□ -1.89
SHMT1-211ENST00000618902 SPRR1AP35321 89 aa3.23□□□□□ -1.89
SHMT1-211ENST00000618902 FAM19A5Q7Z5A7 132 aaPredicted RBP3.23□□□□□ -1.89
SHMT1-211ENST00000618902 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
SHMT1-211ENST00000618902 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
SHMT1-211ENST00000618902 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
SHMT1-211ENST00000618902 A0A087WVE0 104 aa3.22□□□□□ -1.89
SHMT1-211ENST00000618902 FAM19A1Q7Z5A9 133 aa3.22□□□□□ -1.89
SHMT1-211ENST00000618902 ETDCA0A1B0GVM5 59 aa3.21□□□□□ -1.9
SHMT1-211ENST00000618902 BPY2O14599 106 aa3.21□□□□□ -1.9
SHMT1-211ENST00000618902 Q6ZRX8 168 aa3.21□□□□□ -1.9
SHMT1-211ENST00000618902 SPRR4Q96PI1 79 aa3.21□□□□□ -1.9
SHMT1-211ENST00000618902 PSORS1C2Q9UIG4 136 aa3.21□□□□□ -1.9
SHMT1-211ENST00000618902 FAM236DA0A1B0GTK5 79 aa3.2□□□□□ -1.9
SHMT1-211ENST00000618902 FAM236CP0DP71 79 aa3.2□□□□□ -1.9
SHMT1-211ENST00000618902 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
SHMT1-211ENST00000618902 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 F8WEM9 126 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 KRTAP4-16G5E9R7 235 aaPredicted RBP3.19□□□□□ -1.9
SHMT1-211ENST00000618902 H0Y9J4 135 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 H7BZZ5 65 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 IGLV7-43P04211 117 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 UBE2BP63146 152 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 MRPL55Q7Z7F7 128 aaKnown RBP3.19□□□□□ -1.9
SHMT1-211ENST00000618902 Q8N377 158 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 LRP2P98164 4655 aa3.19□□□□□ -1.9
SHMT1-211ENST00000618902 IGLV8-61A0A075B6I0 122 aa3.18□□□□□ -1.9
SHMT1-211ENST00000618902 ZNF861PO60384 105 aa3.18□□□□□ -1.9
SHMT1-211ENST00000618902 NDUFB1O75438 58 aa3.18□□□□□ -1.9
SHMT1-211ENST00000618902 C1orf137Q5JT78 98 aa3.18□□□□□ -1.9
SHMT1-211ENST00000618902 Q8NBF4 154 aa3.18□□□□□ -1.9
SHMT1-211ENST00000618902 TMEM254Q8TBM7 123 aa3.18□□□□□ -1.9
SHMT1-211ENST00000618902 H3BPC8 53 aa3.17□□□□□ -1.9
SHMT1-211ENST00000618902 MT1HL1P0DM35 61 aa3.17□□□□□ -1.9
SHMT1-211ENST00000618902 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
SHMT1-211ENST00000618902 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
SHMT1-211ENST00000618902 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms