RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.1
NOTCH3-206ENST00000601011 Q6ZRX8 168 aa8.21□□□□□ -1.1
NOTCH3-206ENST00000601011 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.1
NOTCH3-206ENST00000601011 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
NOTCH3-206ENST00000601011 LINC00528Q8N1L1 170 aa8.2□□□□□ -1.1
NOTCH3-206ENST00000601011 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
NOTCH3-206ENST00000601011 Q8N377 158 aa8.19□□□□□ -1.1
NOTCH3-206ENST00000601011 A8MUN3 132 aa8.19□□□□□ -1.1
NOTCH3-206ENST00000601011 K7EQZ3 153 aa8.19□□□□□ -1.1
NOTCH3-206ENST00000601011 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
NOTCH3-206ENST00000601011 SEC61GP60059 68 aa8.17□□□□□ -1.1
NOTCH3-206ENST00000601011 OBSCN-AS1Q96MR7 158 aa8.17□□□□□ -1.1
NOTCH3-206ENST00000601011 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
NOTCH3-206ENST00000601011 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
NOTCH3-206ENST00000601011 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
NOTCH3-206ENST00000601011 KLKP1Q107X0 134 aa8.15□□□□□ -1.1
NOTCH3-206ENST00000601011 H3BQ85 93 aa8.15□□□□□ -1.1
NOTCH3-206ENST00000601011 NDUFB1O75438 58 aa8.15□□□□□ -1.1
NOTCH3-206ENST00000601011 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
NOTCH3-206ENST00000601011 KRTAP26-1Q6PEX3 210 aa8.14□□□□□ -1.11
NOTCH3-206ENST00000601011 WIPF1O43516 503 aa8.14□□□□□ -1.11
NOTCH3-206ENST00000601011 ATP5EP56381 51 aaPredicted RBP8.14□□□□□ -1.11
NOTCH3-206ENST00000601011 IGHV6-1A0A0B4J1U7 121 aa8.13□□□□□ -1.11
NOTCH3-206ENST00000601011 MOBPQ13875 183 aa8.12□□□□□ -1.11
NOTCH3-206ENST00000601011 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
NOTCH3-206ENST00000601011 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
NOTCH3-206ENST00000601011 H0Y9P7 68 aa8.12□□□□□ -1.11
NOTCH3-206ENST00000601011 ANK2Q01484 3957 aa8.12□□□□□ -1.11
NOTCH3-206ENST00000601011 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
NOTCH3-206ENST00000601011 TRBV7-4A0A0J9YYF1 115 aa8.11□□□□□ -1.11
NOTCH3-206ENST00000601011 RTL8CO15255 209 aa8.11□□□□□ -1.11
NOTCH3-206ENST00000601011 KCNQ1DNQ9H478 68 aa8.11□□□□□ -1.11
NOTCH3-206ENST00000601011 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
NOTCH3-206ENST00000601011 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
NOTCH3-206ENST00000601011 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
NOTCH3-206ENST00000601011 SPAG11AQ6PDA7 123 aa8.09□□□□□ -1.11
NOTCH3-206ENST00000601011 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
NOTCH3-206ENST00000601011 FBN3Q75N90 2809 aa8.08□□□□□ -1.12
NOTCH3-206ENST00000601011 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
NOTCH3-206ENST00000601011 A0A1W2PNM2 257 aa8.07□□□□□ -1.12
NOTCH3-206ENST00000601011 PANO1I0J062 215 aa8.07□□□□□ -1.12
NOTCH3-206ENST00000601011 Q8NBF4 154 aa8.06□□□□□ -1.12
NOTCH3-206ENST00000601011 IGFL1Q6UW32 110 aa8.05□□□□□ -1.12
NOTCH3-206ENST00000601011 SMR3BP02814 79 aaPredicted RBP8.04□□□□□ -1.12
NOTCH3-206ENST00000601011 TRAV22A0A0B4J277 110 aa8.02□□□□□ -1.13
NOTCH3-206ENST00000601011 A0A087WTM6 91 aa8.02□□□□□ -1.13
NOTCH3-206ENST00000601011 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
NOTCH3-206ENST00000601011 TNP2Q05952 138 aa8.02□□□□□ -1.13
NOTCH3-206ENST00000601011 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
NOTCH3-206ENST00000601011 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
NOTCH3-206ENST00000601011 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
NOTCH3-206ENST00000601011 OCR1Q9BZK8 76 aa7.99□□□□□ -1.13
NOTCH3-206ENST00000601011 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
NOTCH3-206ENST00000601011 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
NOTCH3-206ENST00000601011 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
NOTCH3-206ENST00000601011 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
NOTCH3-206ENST00000601011 SPINK1P00995 79 aa7.95□□□□□ -1.14
NOTCH3-206ENST00000601011 F8WDY8 70 aa7.95□□□□□ -1.14
NOTCH3-206ENST00000601011 BCE1O60756 84 aa7.95□□□□□ -1.14
NOTCH3-206ENST00000601011 A8MU10 97 aa7.94□□□□□ -1.14
NOTCH3-206ENST00000601011 LYSTQ99698 3801 aa7.94□□□□□ -1.14
NOTCH3-206ENST00000601011 TLX1NBP0CAT3 122 aa7.93□□□□□ -1.14
NOTCH3-206ENST00000601011 hDV103S1A0JD37 113 aa7.92□□□□□ -1.14
NOTCH3-206ENST00000601011 DSCR10P59022 87 aa7.92□□□□□ -1.14
NOTCH3-206ENST00000601011 CNBPP62633 177 aaKnown RBP7.88□□□□□ -1.15
NOTCH3-206ENST00000601011 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
NOTCH3-206ENST00000601011 DNAH10Q8IVF4 4471 aa7.87□□□□□ -1.15
NOTCH3-206ENST00000601011 COA5Q86WW8 74 aa7.87□□□□□ -1.15
NOTCH3-206ENST00000601011 WWC2-AS2Q96NR7 200 aa7.86□□□□□ -1.15
NOTCH3-206ENST00000601011 IGLV5-48A0A075B6I7 105 aa7.85□□□□□ -1.15
NOTCH3-206ENST00000601011 KRTAP10-2P60368 255 aa7.84□□□□□ -1.15
NOTCH3-206ENST00000601011 IGKV2D-30A0A075B6S6 120 aa7.82□□□□□ -1.16
NOTCH3-206ENST00000601011 IGKV2-30P06310 120 aa7.82□□□□□ -1.16
NOTCH3-206ENST00000601011 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
NOTCH3-206ENST00000601011 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
NOTCH3-206ENST00000601011 PLA2G2DQ9UNK4 145 aa7.82□□□□□ -1.16
NOTCH3-206ENST00000601011 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
NOTCH3-206ENST00000601011 ZNF861PO60384 105 aa7.81□□□□□ -1.16
NOTCH3-206ENST00000601011 HUWE1Q7Z6Z7 4374 aaKnown RBP7.81□□□□□ -1.16
NOTCH3-206ENST00000601011 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
NOTCH3-206ENST00000601011 SPRR1AP35321 89 aa7.8□□□□□ -1.16
NOTCH3-206ENST00000601011 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
NOTCH3-206ENST00000601011 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
NOTCH3-206ENST00000601011 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
NOTCH3-206ENST00000601011 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
NOTCH3-206ENST00000601011 A8MWP4 228 aa7.75□□□□□ -1.17
NOTCH3-206ENST00000601011 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
NOTCH3-206ENST00000601011 PRAC1Q96KF2 57 aa7.74□□□□□ -1.17
NOTCH3-206ENST00000601011 TYMSOSQ8TAI1 123 aa7.74□□□□□ -1.17
NOTCH3-206ENST00000601011 C9orf92A6NGG3 77 aa7.73□□□□□ -1.17
NOTCH3-206ENST00000601011 Q5VV11 94 aa7.71□□□□□ -1.18
NOTCH3-206ENST00000601011 LOC101927531A0A1B0GV80 90 aa7.7□□□□□ -1.18
NOTCH3-206ENST00000601011 KRTAP10-1P60331 282 aa7.7□□□□□ -1.18
NOTCH3-206ENST00000601011 Q6ZRN7 208 aaPredicted RBP7.7□□□□□ -1.18
NOTCH3-206ENST00000601011 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
NOTCH3-206ENST00000601011 Q1T7F1 81 aa7.69□□□□□ -1.18
NOTCH3-206ENST00000601011 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
NOTCH3-206ENST00000601011 C8orf17Q9NRJ1 99 aa7.68□□□□□ -1.18
NOTCH3-206ENST00000601011 A0A1B0GU69 56 aa7.68□□□□□ -1.18
NOTCH3-206ENST00000601011 RBM12B-AS1Q9P1G2 102 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms