RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 CUBNO60494 3623 aa1.57□□□□□ -2.16
SPG11-223ENST00000560858 GCN1Q92616 2671 aaKnown RBP1.56□□□□□ -2.16
SPG11-223ENST00000560858 ANK2Q01484 3957 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 CMYA5Q8N3K9 4069 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 J3QKU1 62 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 BPY2O14599 106 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 SYCNQ0VAF6 134 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 SERTAD4-AS1Q5TG53 156 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 HRCT1Q6UXD1 115 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 Q6ZRX8 168 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 FP248Q71RG6 208 aaPredicted RBP1.56□□□□□ -2.16
SPG11-223ENST00000560858 SCXQ7RTU7 201 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 Q8N377 158 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 Q8NBF4 154 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 TMEM254Q8TBM7 123 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 C7orf33Q8WU49 177 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 SPRR4Q96PI1 79 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 SMR3AQ99954 134 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 DHRS4-AS1Q9P1J3 65 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 NF1P21359 2839 aa1.56□□□□□ -2.16
SPG11-223ENST00000560858 NSD1Q96L73 2696 aaPredicted RBP1.55□□□□□ -2.16
SPG11-223ENST00000560858 CENPEQ02224 2701 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 IGLV8-61A0A075B6I0 122 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 IGLV1-50A0A075B6I6 118 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 SMIM26A0A096LP01 95 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 A0A1W2PNM2 257 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 C4orf26Q17RF5 130 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 ESRGQ1W209 222 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 Q6ZR54 194 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 Q8N9L7 120 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 NKAPP1Q8N9T2 125 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 MRAPQ8TCY5 172 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 ZCCHC13Q8WW36 166 aaKnown RBP1.55□□□□□ -2.16
SPG11-223ENST00000560858 Q9BRP9 147 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 RETNQ9HD89 108 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 SNURFQ9Y675 71 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 SETD2Q9BYW2 2564 aaPredicted RBP1.55□□□□□ -2.16
SPG11-223ENST00000560858 HIVEP1P15822 2718 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 DNAH1Q9P2D7 4330 aa1.55□□□□□ -2.16
SPG11-223ENST00000560858 IGLV7-46A0A075B6I9 117 aa1.54□□□□□ -2.16
SPG11-223ENST00000560858 IGKV2D-24A0A075B6R9 120 aa1.54□□□□□ -2.16
SPG11-223ENST00000560858 C3orf84H3BNL1 204 aa1.54□□□□□ -2.16
SPG11-223ENST00000560858 FUSP35637 526 aaKnown RBP eCLIP1.54□□□□□ -2.16
SPG11-223ENST00000560858 C1orf137Q5JT78 98 aa1.54□□□□□ -2.16
SPG11-223ENST00000560858 UNC79Q9P2D8 2635 aa1.54□□□□□ -2.16
SPG11-223ENST00000560858 TENM4Q6N022 2769 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 DEFB131BA0A096LNP1 70 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 ETDCA0A1B0GVM5 59 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 hDV103S1A0JD37 113 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 VWFP04275 2813 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 FASNP49327 2511 aaKnown RBP1.53□□□□□ -2.16
SPG11-223ENST00000560858 NIPBLQ6KC79 2804 aaeCLIP1.53□□□□□ -2.16
SPG11-223ENST00000560858 MRPL55Q7Z7F7 128 aaKnown RBP1.53□□□□□ -2.16
SPG11-223ENST00000560858 CYP4F30PQ9H0H9 118 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 PRO0628Q9UI54 55 aa1.53□□□□□ -2.16
SPG11-223ENST00000560858 ITPR2Q14571 2701 aa1.53□□□□□ -2.17
SPG11-223ENST00000560858 FAM168BA1KXE4 195 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 RPL37AP8A6NKH3 93 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 HCG22E2RYF7 251 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 K7EQZ3 153 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 SPRR1BP22528 89 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 CNBPP62633 177 aaKnown RBP1.52□□□□□ -2.17
SPG11-223ENST00000560858 FAM229BQ4G0N7 80 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 CASC10Q5T4H9 136 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 REG3GQ6UW15 175 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 IGFL1Q6UW32 110 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 LINC00336Q6ZUF6 198 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 ST20-AS1Q8NBB2 130 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 C11orf45Q8TAV5 145 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 HIGD2AQ9BW72 106 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 LINC00474Q9P2X8 69 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 LINC00588Q9Y4M8 146 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 NBEAL2Q6ZNJ1 2754 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 TENM3Q9P273 2699 aa1.52□□□□□ -2.17
SPG11-223ENST00000560858 TEP1Q99973 2627 aaKnown RBP1.51□□□□□ -2.17
SPG11-223ENST00000560858 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
SPG11-223ENST00000560858 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.51□□□□□ -2.17
SPG11-223ENST00000560858 A0A096LNI7 61 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 C16orf90A8MZG2 172 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 H0Y9J4 135 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 H3BPC8 53 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 PSCAO43653 123 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 UBE2BP63146 152 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 KRTAP11-1Q8IUC1 163 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 TRRAPQ9Y4A5 3859 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 TENM1Q9UKZ4 2725 aa1.51□□□□□ -2.17
SPG11-223ENST00000560858 OTOGQ6ZRI0 2925 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 DYNC2H1Q8NCM8 4307 aaKnown RBP1.5□□□□□ -2.17
SPG11-223ENST00000560858 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 NDUFB1O75438 58 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 PRLHP81277 87 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 Q1T7F1 81 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 SPANXA2-OT1Q8N9U9 137 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 C1orf64Q8NEQ6 169 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 PKIGQ9Y2B9 76 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 ATRQ13535 2644 aa1.5□□□□□ -2.17
SPG11-223ENST00000560858 HUWE1Q7Z6Z7 4374 aaKnown RBP1.49□□□□□ -2.17
SPG11-223ENST00000560858 A0A087WSZ3 146 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms