RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, human

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00943-206	ENST00000540250	SPRR1A	P35321	89 aa		4.91	□□□□□ -1.62
LINC00943-206	ENST00000540250	ORMDL1	Q9P0S3	153 aa		4.91	□□□□□ -1.62
LINC00943-206	ENST00000540250	ETDC	A0A1B0GVM5	59 aa		4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	EPM2A	B3EWF7	344 aa		4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	NDUFV3	P56181	108 aa	Known RBP	4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	OCIAD2	Q56VL3	154 aa		4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	REG3G	Q6UW15	175 aa		4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	OCR1	Q9BZK8	76 aa		4.9	□□□□□ -1.63
LINC00943-206	ENST00000540250	UBE2B	P63146	152 aa		4.89	□□□□□ -1.63
LINC00943-206	ENST00000540250		Q6ZRX8	168 aa		4.89	□□□□□ -1.63
LINC00943-206	ENST00000540250	PHF5A	Q7RTV0	110 aa	Known RBP	4.89	□□□□□ -1.63
LINC00943-206	ENST00000540250		Q8NBF4	154 aa		4.89	□□□□□ -1.63
LINC00943-206	ENST00000540250	PPDPFL	Q8WWR9	84 aa		4.89	□□□□□ -1.63
LINC00943-206	ENST00000540250	DPH3	Q96FX2	82 aa		4.89	□□□□□ -1.63
LINC00943-206	ENST00000540250	INAFM2	P0DMQ5	153 aa		4.88	□□□□□ -1.63
LINC00943-206	ENST00000540250	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC00943-206	ENST00000540250	DHRS4-AS1	Q9P1J3	65 aa		4.88	□□□□□ -1.63
LINC00943-206	ENST00000540250		H3BQ85	93 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250	TMEM256-PLSCR3	K7ERE1	68 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250		K7ERU9	68 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250	LCE1F	Q5T754	118 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250		Q6ZQY7	126 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250	LINC00336	Q6ZUF6	198 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250	PLAC8	Q9NZF1	115 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250	FRAS1	Q86XX4	4008 aa		4.87	□□□□□ -1.63
LINC00943-206	ENST00000540250	TEX49	A0A1B0GTD5	131 aa		4.86	□□□□□ -1.63
LINC00943-206	ENST00000540250		J3QR89	54 aa		4.86	□□□□□ -1.63
LINC00943-206	ENST00000540250	KRTAP11-1	Q8IUC1	163 aa		4.86	□□□□□ -1.63
LINC00943-206	ENST00000540250		Q9BRP9	147 aa		4.86	□□□□□ -1.63
LINC00943-206	ENST00000540250	FAM19A1	Q7Z5A9	133 aa		4.85	□□□□□ -1.63
LINC00943-206	ENST00000540250	HECTD4	Q9Y4D8	3996 aa		4.85	□□□□□ -1.63
LINC00943-206	ENST00000540250	NDUFAF8	A1L188	74 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250		H0Y9J4	135 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	BCE1	O60756	84 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	KRTAP10-1	P60331	282 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	PRLH	P81277	87 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250		Q6ZSA8	131 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	SMCR5	Q8TEV8	140 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	OBSCN-AS1	Q96MR7	158 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	DNAH2	Q9P225	4427 aa		4.83	□□□□□ -1.64
LINC00943-206	ENST00000540250	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.82	□□□□□ -1.64
LINC00943-206	ENST00000540250	UBE2A	P49459	152 aa		4.82	□□□□□ -1.64
LINC00943-206	ENST00000540250	DNAH17	Q9UFH2	4485 aa		4.82	□□□□□ -1.64
LINC00943-206	ENST00000540250	ERC2-IT1	O76042	136 aa		4.81	□□□□□ -1.64
LINC00943-206	ENST00000540250	C14orf132	Q9NPU4	83 aa		4.81	□□□□□ -1.64
LINC00943-206	ENST00000540250	LAMTOR3	Q9UHA4	124 aa		4.81	□□□□□ -1.64
LINC00943-206	ENST00000540250	HYDIN	Q4G0P3	5121 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	IGLV5-48	A0A075B6I7	105 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250		A0A1B0GV72	72 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250		A0A1B0GVY2	172 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	SCX	Q7RTU7	201 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	KRTAP13-1	Q8IUC0	172 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250		Q8N377	158 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	ST20-AS1	Q8NBB2	130 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	DEFB105A	Q8NG35	78 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	CIRBP-AS1	Q8TBR5	109 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	HIGD2A	Q9BW72	106 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	PSORS1C2	Q9UIG4	136 aa		4.8	□□□□□ -1.64
LINC00943-206	ENST00000540250	FAM240A	A0A1B0GVK7	77 aa		4.79	□□□□□ -1.64
LINC00943-206	ENST00000540250	RBM3	P98179	157 aa	Known RBP	4.79	□□□□□ -1.64
LINC00943-206	ENST00000540250	C1orf137	Q5JT78	98 aa		4.78	□□□□□ -1.64
LINC00943-206	ENST00000540250	LOC110117498	A0A087WWA1	95 aa		4.77	□□□□□ -1.65
LINC00943-206	ENST00000540250	ACYP1	P07311	99 aa		4.77	□□□□□ -1.65
LINC00943-206	ENST00000540250	DSCR8	Q96T75	97 aa		4.77	□□□□□ -1.65
LINC00943-206	ENST00000540250	VPS25	Q9BRG1	176 aa		4.77	□□□□□ -1.65
LINC00943-206	ENST00000540250	TRBV7-4	A0A0J9YYF1	115 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250	CCK	P06307	115 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250	PDE6G	P18545	87 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250	HAMP	P81172	84 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250		Q6ZQT0	140 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250	PKD1	P98161	4303 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250	FAT2	Q9NYQ8	4349 aa		4.76	□□□□□ -1.65
LINC00943-206	ENST00000540250		F8WEM9	126 aa		4.75	□□□□□ -1.65
LINC00943-206	ENST00000540250	ZNF861P	O60384	105 aa		4.75	□□□□□ -1.65
LINC00943-206	ENST00000540250	IGLV7-43	P04211	117 aa		4.75	□□□□□ -1.65
LINC00943-206	ENST00000540250	SPRR1B	P22528	89 aa		4.75	□□□□□ -1.65
LINC00943-206	ENST00000540250	C3orf22	Q8N5N4	141 aa		4.75	□□□□□ -1.65
LINC00943-206	ENST00000540250	OBSCN	Q5VST9	7968 aa		4.75	□□□□□ -1.65
LINC00943-206	ENST00000540250	DNAH11	Q96DT5	4516 aa		4.74	□□□□□ -1.65
LINC00943-206	ENST00000540250	SACS	Q9NZJ4	4579 aa		4.74	□□□□□ -1.65
LINC00943-206	ENST00000540250	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.74	□□□□□ -1.65
LINC00943-206	ENST00000540250	SPRR4	Q96PI1	79 aa		4.73	□□□□□ -1.65
LINC00943-206	ENST00000540250	RYR2	Q92736	4967 aa		4.72	□□□□□ -1.65
LINC00943-206	ENST00000540250	IGLV8-61	A0A075B6I0	122 aa		4.72	□□□□□ -1.65
LINC00943-206	ENST00000540250	LINC00483	Q53H64	154 aa		4.72	□□□□□ -1.65
LINC00943-206	ENST00000540250	DNAH5	Q8TE73	4624 aa		4.72	□□□□□ -1.65
LINC00943-206	ENST00000540250	LINC00846	Q9NV44	126 aa		4.71	□□□□□ -1.66
LINC00943-206	ENST00000540250	DNAH8	Q96JB1	4490 aa		4.7	□□□□□ -1.66
LINC00943-206	ENST00000540250		Q6JHZ5	121 aa		4.69	□□□□□ -1.66
LINC00943-206	ENST00000540250	IGFL1	Q6UW32	110 aa		4.69	□□□□□ -1.66
LINC00943-206	ENST00000540250	SIGMAR1	Q99720	223 aa		4.69	□□□□□ -1.66
LINC00943-206	ENST00000540250		A0A1B0GW54	56 aa		4.68	□□□□□ -1.66
LINC00943-206	ENST00000540250	MT-ATP8	P03928	68 aa		4.68	□□□□□ -1.66
LINC00943-206	ENST00000540250	RPL37A	P61513	92 aa	Known RBP	4.68	□□□□□ -1.66
LINC00943-206	ENST00000540250	LINC00643	Q86TS7	51 aa		4.68	□□□□□ -1.66
LINC00943-206	ENST00000540250	UBL5	Q9BZL1	73 aa		4.68	□□□□□ -1.66
LINC00943-206	ENST00000540250		A0A1W2PNM2	257 aa		4.67	□□□□□ -1.66
LINC00943-206	ENST00000540250	C9orf153	Q5TBE3	101 aa		4.66	□□□□□ -1.66
LINC00943-206	ENST00000540250	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms