RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 DNAH6Q9C0G6 4158 aa5.03□□□□□ -1.6
CCDC60-204ENST00000539847 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
CCDC60-204ENST00000539847 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC60-204ENST00000539847 ESRGQ1W209 222 aa5.02□□□□□ -1.61
CCDC60-204ENST00000539847 C11orf45Q8TAV5 145 aa5.02□□□□□ -1.61
CCDC60-204ENST00000539847 C6orf48Q9UBA6 75 aa5.02□□□□□ -1.61
CCDC60-204ENST00000539847 PKHD1P08F94 4074 aa5.02□□□□□ -1.61
CCDC60-204ENST00000539847 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
CCDC60-204ENST00000539847 HIGD2BQ4VC39 106 aa5.01□□□□□ -1.61
CCDC60-204ENST00000539847 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
CCDC60-204ENST00000539847 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
CCDC60-204ENST00000539847 A0A1B0GVY2 172 aa5□□□□□ -1.61
CCDC60-204ENST00000539847 H3BNG1 76 aa5□□□□□ -1.61
CCDC60-204ENST00000539847 CLPSL2Q6UWE3 100 aa5□□□□□ -1.61
CCDC60-204ENST00000539847 APLNQ9ULZ1 77 aa5□□□□□ -1.61
CCDC60-204ENST00000539847 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
CCDC60-204ENST00000539847 IGLV10-54A0A075B6I4 117 aa4.99□□□□□ -1.61
CCDC60-204ENST00000539847 IGLV5-52A0A0A0MRZ9 124 aa4.99□□□□□ -1.61
CCDC60-204ENST00000539847 DAD1P61803 113 aa4.99□□□□□ -1.61
CCDC60-204ENST00000539847 Q1T7F1 81 aa4.99□□□□□ -1.61
CCDC60-204ENST00000539847 KCNQ1DNQ9H478 68 aa4.99□□□□□ -1.61
CCDC60-204ENST00000539847 SPART-AS1P0CW21 52 aa4.98□□□□□ -1.61
CCDC60-204ENST00000539847 CYP4F30PQ9H0H9 118 aa4.98□□□□□ -1.61
CCDC60-204ENST00000539847 DHRS4-AS1Q9P1J3 65 aa4.98□□□□□ -1.61
CCDC60-204ENST00000539847 LINC00474Q9P2X8 69 aa4.98□□□□□ -1.61
CCDC60-204ENST00000539847 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
CCDC60-204ENST00000539847 hDV103S1A0JD37 113 aa4.97□□□□□ -1.61
CCDC60-204ENST00000539847 PRR26Q8N8Z3 221 aa4.97□□□□□ -1.61
CCDC60-204ENST00000539847 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
CCDC60-204ENST00000539847 V9GYY9 64 aa4.97□□□□□ -1.61
CCDC60-204ENST00000539847 DYNC1H1Q14204 4646 aaKnown RBP4.97□□□□□ -1.61
CCDC60-204ENST00000539847 DNAH17Q9UFH2 4485 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 C1orf195Q5TG92 126 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 KRTAP26-1Q6PEX3 210 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 Q8NAQ8 132 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 CAMK2N2Q96S95 79 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 KLK12Q9UKR0 248 aa4.96□□□□□ -1.62
CCDC60-204ENST00000539847 IGLV5-37A0A075B6J1 123 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 A0A096LPF7 62 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 NDUFB1O75438 58 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 TLX1NBP0CAT3 122 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 SCXQ7RTU7 201 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 PRR15Q8IV56 129 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 Q8N377 158 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 XAGE1AQ9HD64 81 aa4.95□□□□□ -1.62
CCDC60-204ENST00000539847 RTL8CO15255 209 aa4.94□□□□□ -1.62
CCDC60-204ENST00000539847 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
CCDC60-204ENST00000539847 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
CCDC60-204ENST00000539847 H3BPC8 53 aa4.93□□□□□ -1.62
CCDC60-204ENST00000539847 CDK2AP2O75956 126 aa4.93□□□□□ -1.62
CCDC60-204ENST00000539847 Q6ZRU5 148 aa4.93□□□□□ -1.62
CCDC60-204ENST00000539847 Q8NBF4 154 aa4.93□□□□□ -1.62
CCDC60-204ENST00000539847 HIGD2AQ9BW72 106 aa4.93□□□□□ -1.62
CCDC60-204ENST00000539847 SPRR1AP35321 89 aa4.92□□□□□ -1.62
CCDC60-204ENST00000539847 Q6ZR54 194 aa4.92□□□□□ -1.62
CCDC60-204ENST00000539847 HSPG2P98160 4391 aa4.91□□□□□ -1.62
CCDC60-204ENST00000539847 DEFB131BA0A096LNP1 70 aa4.91□□□□□ -1.62
CCDC60-204ENST00000539847 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
CCDC60-204ENST00000539847 KRTAP4-16G5E9R7 235 aaPredicted RBP4.91□□□□□ -1.62
CCDC60-204ENST00000539847 DEFB4AO15263 64 aa4.91□□□□□ -1.62
CCDC60-204ENST00000539847 FAM229BQ4G0N7 80 aa4.91□□□□□ -1.62
CCDC60-204ENST00000539847 PKD1P98161 4303 aa4.91□□□□□ -1.62
CCDC60-204ENST00000539847 SYCNQ0VAF6 134 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 C1orf137Q5JT78 98 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 Q6ZRX8 168 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 C15orf56Q8N910 161 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 NKAPP1Q8N9T2 125 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 PKIGQ9Y2B9 76 aa4.9□□□□□ -1.63
CCDC60-204ENST00000539847 DSCR10P59022 87 aa4.89□□□□□ -1.63
CCDC60-204ENST00000539847 SMIM29Q86T20 159 aa4.89□□□□□ -1.63
CCDC60-204ENST00000539847 Q8N9L7 120 aa4.89□□□□□ -1.63
CCDC60-204ENST00000539847 C1orf64Q8NEQ6 169 aa4.89□□□□□ -1.63
CCDC60-204ENST00000539847 C7orf33Q8WU49 177 aa4.89□□□□□ -1.63
CCDC60-204ENST00000539847 KRTAP4-5Q9BYR2 181 aa4.89□□□□□ -1.63
CCDC60-204ENST00000539847 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
CCDC60-204ENST00000539847 IGLV8-61A0A075B6I0 122 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 IGLV1-50A0A075B6I6 118 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 RPL37AP8A6NKH3 93 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 LINC01556Q5JQF7 62 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 C1orf134Q5TEV5 83 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 Q6ZRP5 223 aa4.88□□□□□ -1.63
CCDC60-204ENST00000539847 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.87□□□□□ -1.63
CCDC60-204ENST00000539847 IGLV9-49A0A0B4J1Y8 123 aa4.87□□□□□ -1.63
CCDC60-204ENST00000539847 HCG22E2RYF7 251 aa4.87□□□□□ -1.63
CCDC60-204ENST00000539847 MP68P56378 58 aa4.87□□□□□ -1.63
CCDC60-204ENST00000539847 SEC61GP60059 68 aa4.87□□□□□ -1.63
CCDC60-204ENST00000539847 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
CCDC60-204ENST00000539847 PMAIP1Q13794 54 aa4.86□□□□□ -1.63
CCDC60-204ENST00000539847 UBE2DNLQ8IWF7 75 aa4.86□□□□□ -1.63
CCDC60-204ENST00000539847 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
CCDC60-204ENST00000539847 C16orf90A8MZG2 172 aa4.85□□□□□ -1.63
CCDC60-204ENST00000539847 PSCAO43653 123 aa4.85□□□□□ -1.63
CCDC60-204ENST00000539847 LIMD2Q9BT23 127 aa4.85□□□□□ -1.63
CCDC60-204ENST00000539847 LINC00588Q9Y4M8 146 aa4.85□□□□□ -1.63
CCDC60-204ENST00000539847 TRAV22A0A0B4J277 110 aa4.84□□□□□ -1.63
CCDC60-204ENST00000539847 MRPL55Q7Z7F7 128 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms