RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 LINC00643Q86TS7 51 aa6.41□□□□□ -1.38
HDAC3-210ENST00000490808 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-210ENST00000490808 A0A1B0GW54 56 aa6.4□□□□□ -1.38
HDAC3-210ENST00000490808 Q6ZQT0 140 aa6.4□□□□□ -1.38
HDAC3-210ENST00000490808 Q8N377 158 aa6.4□□□□□ -1.38
HDAC3-210ENST00000490808 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
HDAC3-210ENST00000490808 HIGD2AQ9BW72 106 aa6.4□□□□□ -1.38
HDAC3-210ENST00000490808 UBL5Q9BZL1 73 aa6.4□□□□□ -1.38
HDAC3-210ENST00000490808 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
HDAC3-210ENST00000490808 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
HDAC3-210ENST00000490808 KRTAP10-1P60331 282 aa6.39□□□□□ -1.39
HDAC3-210ENST00000490808 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-210ENST00000490808 PRLHP81277 87 aa6.38□□□□□ -1.39
HDAC3-210ENST00000490808 Q8N1X5 172 aa6.38□□□□□ -1.39
HDAC3-210ENST00000490808 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
HDAC3-210ENST00000490808 XGP55808 180 aa6.37□□□□□ -1.39
HDAC3-210ENST00000490808 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
HDAC3-210ENST00000490808 PANO1I0J062 215 aa6.36□□□□□ -1.39
HDAC3-210ENST00000490808 LINC01547P58512 204 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-210ENST00000490808 ATP5EP2Q5VTU8 51 aa6.36□□□□□ -1.39
HDAC3-210ENST00000490808 Q6Q795 121 aa6.36□□□□□ -1.39
HDAC3-210ENST00000490808 FAT1Q14517 4588 aa6.35□□□□□ -1.39
HDAC3-210ENST00000490808 ERC2-IT1O76042 136 aa6.35□□□□□ -1.39
HDAC3-210ENST00000490808 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
HDAC3-210ENST00000490808 ST20-AS1Q8NBB2 130 aa6.35□□□□□ -1.39
HDAC3-210ENST00000490808 SPRR1BP22528 89 aa6.34□□□□□ -1.39
HDAC3-210ENST00000490808 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
HDAC3-210ENST00000490808 Q6JHZ5 121 aa6.34□□□□□ -1.39
HDAC3-210ENST00000490808 LINC00846Q9NV44 126 aa6.34□□□□□ -1.39
HDAC3-210ENST00000490808 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.4
HDAC3-210ENST00000490808 PSORS1C2Q9UIG4 136 aa6.33□□□□□ -1.4
HDAC3-210ENST00000490808 ZNF861PO60384 105 aa6.32□□□□□ -1.4
HDAC3-210ENST00000490808 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
HDAC3-210ENST00000490808 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
HDAC3-210ENST00000490808 TRBV7-7A0A0K0K1E9 115 aa6.31□□□□□ -1.4
HDAC3-210ENST00000490808 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
HDAC3-210ENST00000490808 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
HDAC3-210ENST00000490808 KRTAP13-1Q8IUC0 172 aa6.31□□□□□ -1.4
HDAC3-210ENST00000490808 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
HDAC3-210ENST00000490808 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
HDAC3-210ENST00000490808 NREPQ16612 68 aa6.3□□□□□ -1.4
HDAC3-210ENST00000490808 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
HDAC3-210ENST00000490808 PLA2G1BP04054 148 aaKnown RBP6.29□□□□□ -1.4
HDAC3-210ENST00000490808 C3orf22Q8N5N4 141 aa6.29□□□□□ -1.4
HDAC3-210ENST00000490808 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
HDAC3-210ENST00000490808 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
HDAC3-210ENST00000490808 Q8NBF4 154 aa6.28□□□□□ -1.4
HDAC3-210ENST00000490808 CXCL6P80162 114 aa6.27□□□□□ -1.41
HDAC3-210ENST00000490808 HAMPP81172 84 aa6.27□□□□□ -1.41
HDAC3-210ENST00000490808 Q6ZVQ6 151 aa6.27□□□□□ -1.41
HDAC3-210ENST00000490808 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
HDAC3-210ENST00000490808 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
HDAC3-210ENST00000490808 CRYGAP11844 174 aa6.25□□□□□ -1.41
HDAC3-210ENST00000490808 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
HDAC3-210ENST00000490808 IGKV3D-7A0A0C4DH55 119 aa6.24□□□□□ -1.41
HDAC3-210ENST00000490808 Q5VSD8 79 aa6.24□□□□□ -1.41
HDAC3-210ENST00000490808 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
HDAC3-210ENST00000490808 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
HDAC3-210ENST00000490808 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
HDAC3-210ENST00000490808 DMBT1Q9UGM3 2413 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-210ENST00000490808 A0A1W2PNM2 257 aa6.23□□□□□ -1.41
HDAC3-210ENST00000490808 HIST1H4AP62805 103 aaKnown RBP6.23□□□□□ -1.41
HDAC3-210ENST00000490808 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
HDAC3-210ENST00000490808 BPY2O14599 106 aa6.22□□□□□ -1.41
HDAC3-210ENST00000490808 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-210ENST00000490808 SMR3BP02814 79 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-210ENST00000490808 IGLV9-49A0A0B4J1Y8 123 aa6.2□□□□□ -1.42
HDAC3-210ENST00000490808 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
HDAC3-210ENST00000490808 FAM236AA0A1B0GUQ0 79 aa6.19□□□□□ -1.42
HDAC3-210ENST00000490808 FAM236BA0A1B0GV22 79 aa6.19□□□□□ -1.42
HDAC3-210ENST00000490808 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
HDAC3-210ENST00000490808 J3QL48 77 aa6.18□□□□□ -1.42
HDAC3-210ENST00000490808 ATOX1O00244 68 aa6.18□□□□□ -1.42
HDAC3-210ENST00000490808 SSBP3-AS1Q7Z2R9 100 aa6.18□□□□□ -1.42
HDAC3-210ENST00000490808 FAM229BQ4G0N7 80 aa6.17□□□□□ -1.42
HDAC3-210ENST00000490808 A0A087WSZ3 146 aa6.16□□□□□ -1.42
HDAC3-210ENST00000490808 J3KT08 172 aa6.16□□□□□ -1.42
HDAC3-210ENST00000490808 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
HDAC3-210ENST00000490808 MOBPQ13875 183 aa6.15□□□□□ -1.42
HDAC3-210ENST00000490808 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
HDAC3-210ENST00000490808 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
HDAC3-210ENST00000490808 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-210ENST00000490808 CD164Q04900 197 aa6.14□□□□□ -1.43
HDAC3-210ENST00000490808 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
HDAC3-210ENST00000490808 A0A087WVE0 104 aa6.11□□□□□ -1.43
HDAC3-210ENST00000490808 NDUFB1O75438 58 aa6.11□□□□□ -1.43
HDAC3-210ENST00000490808 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
HDAC3-210ENST00000490808 OXTP01178 125 aa6.1□□□□□ -1.43
HDAC3-210ENST00000490808 IGKV4-1P06312 121 aa6.09□□□□□ -1.43
HDAC3-210ENST00000490808 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
HDAC3-210ENST00000490808 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
HDAC3-210ENST00000490808 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
HDAC3-210ENST00000490808 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
HDAC3-210ENST00000490808 HRCT1Q6UXD1 115 aa6.07□□□□□ -1.44
HDAC3-210ENST00000490808 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
HDAC3-210ENST00000490808 UQCRQO14949 82 aa6.06□□□□□ -1.44
HDAC3-210ENST00000490808 COX7CP15954 63 aa6.06□□□□□ -1.44
HDAC3-210ENST00000490808 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
HDAC3-210ENST00000490808 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
HDAC3-210ENST00000490808 TRAV7A0A075B6U4 112 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms