RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 Q6ZRN7 208 aaPredicted RBP16.34■□□□□ 0.21
HLA-C-208ENST00000487245 COL7A1Q02388 2944 aa16.34■□□□□ 0.21
HLA-C-208ENST00000487245 PRLHP81277 87 aa16.33■□□□□ 0.21
HLA-C-208ENST00000487245 IGFL1Q6UW32 110 aa16.33■□□□□ 0.21
HLA-C-208ENST00000487245 LCE6AA0A183 80 aa16.32■□□□□ 0.2
HLA-C-208ENST00000487245 CHTF8P0CG12 524 aa16.32■□□□□ 0.2
HLA-C-208ENST00000487245 Q5XG85 94 aa16.32■□□□□ 0.2
HLA-C-208ENST00000487245 PHF5AQ7RTV0 110 aaKnown RBP16.32■□□□□ 0.2
HLA-C-208ENST00000487245 HIGD2AQ9BW72 106 aa16.3■□□□□ 0.2
HLA-C-208ENST00000487245 SPRR1BP22528 89 aa16.28■□□□□ 0.2
HLA-C-208ENST00000487245 K7EQZ3 153 aa16.25■□□□□ 0.19
HLA-C-208ENST00000487245 C5orf47Q569G3 176 aa16.25■□□□□ 0.19
HLA-C-208ENST00000487245 UBE2AP49459 152 aa16.22■□□□□ 0.19
HLA-C-208ENST00000487245 KRTAP11-1Q8IUC1 163 aa16.22■□□□□ 0.19
HLA-C-208ENST00000487245 FAM30AQ9NZY2 134 aa16.22■□□□□ 0.19
HLA-C-208ENST00000487245 DNAH10Q8IVF4 4471 aa16.21■□□□□ 0.19
HLA-C-208ENST00000487245 DNHD1Q96M86 4753 aa16.19■□□□□ 0.18
HLA-C-208ENST00000487245 SMIM26A0A096LP01 95 aa16.18■□□□□ 0.18
HLA-C-208ENST00000487245 HCG22E2RYF7 251 aa16.18■□□□□ 0.18
HLA-C-208ENST00000487245 A0A0G2JQZ4 141 aa16.17■□□□□ 0.18
HLA-C-208ENST00000487245 C4orf26Q17RF5 130 aa16.17■□□□□ 0.18
HLA-C-208ENST00000487245 A0A087WSZ3 146 aa16.14■□□□□ 0.17
HLA-C-208ENST00000487245 A0A087WTM6 91 aa16.14■□□□□ 0.17
HLA-C-208ENST00000487245 SPACA4Q8TDM5 124 aa16.13■□□□□ 0.17
HLA-C-208ENST00000487245 LYSTQ99698 3801 aa16.13■□□□□ 0.17
HLA-C-208ENST00000487245 ZCCHC13Q8WW36 166 aaKnown RBP16.12■□□□□ 0.17
HLA-C-208ENST00000487245 PANO1I0J062 215 aa16.11■□□□□ 0.17
HLA-C-208ENST00000487245 PLECQ15149 4684 aaKnown RBP16.09■□□□□ 0.17
HLA-C-208ENST00000487245 KRTAP13-1Q8IUC0 172 aa16.08■□□□□ 0.17
HLA-C-208ENST00000487245 CSMD3Q7Z407 3707 aa16.06■□□□□ 0.16
HLA-C-208ENST00000487245 HRCT1Q6UXD1 115 aa16.06■□□□□ 0.16
HLA-C-208ENST00000487245 Q6ZR54 194 aa16.06■□□□□ 0.16
HLA-C-208ENST00000487245 FP248Q71RG6 208 aaPredicted RBP16.05■□□□□ 0.16
HLA-C-208ENST00000487245 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.05■□□□□ 0.16
HLA-C-208ENST00000487245 DNAH7Q8WXX0 4024 aa16.02■□□□□ 0.16
HLA-C-208ENST00000487245 DEFB116Q30KQ4 102 aa16.01■□□□□ 0.15
HLA-C-208ENST00000487245 KRTAP29-1A8MX34 341 aaPredicted RBP16.01■□□□□ 0.15
HLA-C-208ENST00000487245 RTL8CO15255 209 aa16■□□□□ 0.15
HLA-C-208ENST00000487245 LINC00472Q9H8W2 130 aa16■□□□□ 0.15
HLA-C-208ENST00000487245 VPS13DQ5THJ4 4388 aa16■□□□□ 0.15
HLA-C-208ENST00000487245 TENM2Q9NT68 2774 aa15.97■□□□□ 0.15
HLA-C-208ENST00000487245 PRR15Q8IV56 129 aa15.97■□□□□ 0.15
HLA-C-208ENST00000487245 A8MWP4 228 aa15.95■□□□□ 0.14
HLA-C-208ENST00000487245 WFDC13Q8IUB5 93 aa15.95■□□□□ 0.14
HLA-C-208ENST00000487245 RPL37AP61513 92 aaKnown RBP15.94■□□□□ 0.14
HLA-C-208ENST00000487245 C1orf134Q5TEV5 83 aa15.92■□□□□ 0.14
HLA-C-208ENST00000487245 PLAC8Q9NZF1 115 aa15.92■□□□□ 0.14
HLA-C-208ENST00000487245 MEGF8Q7Z7M0 2845 aa15.91■□□□□ 0.14
HLA-C-208ENST00000487245 ZNF706Q9Y5V0 76 aaPredicted RBP15.91■□□□□ 0.14
HLA-C-208ENST00000487245 NDUFB1O75438 58 aa15.88■□□□□ 0.13
HLA-C-208ENST00000487245 MP68P56378 58 aa15.88■□□□□ 0.13
HLA-C-208ENST00000487245 FAM229BQ4G0N7 80 aa15.88■□□□□ 0.13
HLA-C-208ENST00000487245 LINC00483Q53H64 154 aa15.88■□□□□ 0.13
HLA-C-208ENST00000487245 CASC2Q6XLA1 102 aa15.88■□□□□ 0.13
HLA-C-208ENST00000487245 STARD9Q9P2P6 4700 aa15.87■□□□□ 0.13
HLA-C-208ENST00000487245 hDV103S1A0JD37 113 aa15.86■□□□□ 0.13
HLA-C-208ENST00000487245 IGLV5-52A0A0A0MRZ9 124 aa15.86■□□□□ 0.13
HLA-C-208ENST00000487245 CYP4F30PQ9H0H9 118 aa15.86■□□□□ 0.13
HLA-C-208ENST00000487245 H3BPC8 53 aa15.85■□□□□ 0.13
HLA-C-208ENST00000487245 PSORS1C2Q9UIG4 136 aa15.84■□□□□ 0.13
HLA-C-208ENST00000487245 PRKDCP78527 4128 aaKnown RBP15.81■□□□□ 0.12
HLA-C-208ENST00000487245 TRAV22A0A0B4J277 110 aa15.8■□□□□ 0.12
HLA-C-208ENST00000487245 ZNF861PO60384 105 aa15.78■□□□□ 0.12
HLA-C-208ENST00000487245 IGLV9-49A0A0B4J1Y8 123 aa15.77■□□□□ 0.11
HLA-C-208ENST00000487245 MMP24-AS1A0A0U1RRL7 71 aa15.76■□□□□ 0.11
HLA-C-208ENST00000487245 LY6G6CO95867 125 aa15.76■□□□□ 0.11
HLA-C-208ENST00000487245 C1orf64Q8NEQ6 169 aa15.76■□□□□ 0.11
HLA-C-208ENST00000487245 Q96NJ1 140 aa15.75■□□□□ 0.11
HLA-C-208ENST00000487245 H0Y9P7 68 aa15.74■□□□□ 0.11
HLA-C-208ENST00000487245 LINC00208Q96KT6 92 aa15.74■□□□□ 0.11
HLA-C-208ENST00000487245 LINC00336Q6ZUF6 198 aa15.71■□□□□ 0.11
HLA-C-208ENST00000487245 ASB16-AS1Q495Z4 193 aa15.7■□□□□ 0.1
HLA-C-208ENST00000487245 SPANXA2-OT1Q8N9U9 137 aa15.7■□□□□ 0.1
HLA-C-208ENST00000487245 WWC2-AS2Q96NR7 200 aa15.7■□□□□ 0.1
HLA-C-208ENST00000487245 DNAH17Q9UFH2 4485 aa15.69■□□□□ 0.1
HLA-C-208ENST00000487245 MPLKIPQ8TAP9 179 aa15.67■□□□□ 0.1
HLA-C-208ENST00000487245 SRRM2Q9UQ35 2752 aaKnown RBP15.66■□□□□ 0.1
HLA-C-208ENST00000487245 FBN3Q75N90 2809 aa15.66■□□□□ 0.1
HLA-C-208ENST00000487245 MOBPQ13875 183 aa15.65■□□□□ 0.1
HLA-C-208ENST00000487245 PRO0628Q9UI54 55 aa15.65■□□□□ 0.1
HLA-C-208ENST00000487245 HECTD4Q9Y4D8 3996 aa15.65■□□□□ 0.1
HLA-C-208ENST00000487245 IGLV7-43P04211 117 aa15.63■□□□□ 0.09
HLA-C-208ENST00000487245 Q1T7F1 81 aa15.63■□□□□ 0.09
HLA-C-208ENST00000487245 TP53AIP1Q9HCN2 124 aa15.59■□□□□ 0.09
HLA-C-208ENST00000487245 C8orf17Q9NRJ1 99 aa15.58■□□□□ 0.08
HLA-C-208ENST00000487245 DNAH2Q9P225 4427 aa15.57■□□□□ 0.08
HLA-C-208ENST00000487245 PRR4Q16378 134 aa15.57■□□□□ 0.08
HLA-C-208ENST00000487245 KMT2AQ03164 3969 aa15.56■□□□□ 0.08
HLA-C-208ENST00000487245 DNAH6Q9C0G6 4158 aa15.54■□□□□ 0.08
HLA-C-208ENST00000487245 A0A1B0GVX0 72 aa15.54■□□□□ 0.08
HLA-C-208ENST00000487245 ANAPC11Q9NYG5 84 aa15.53■□□□□ 0.08
HLA-C-208ENST00000487245 KRTAP10-2P60368 255 aa15.49■□□□□ 0.07
HLA-C-208ENST00000487245 CIRBP-AS1Q8TBR5 109 aa15.49■□□□□ 0.07
HLA-C-208ENST00000487245 CDK2AP2O75956 126 aa15.48■□□□□ 0.07
HLA-C-208ENST00000487245 CD164Q04900 197 aa15.44■□□□□ 0.06
HLA-C-208ENST00000487245 SSBP3-AS1Q7Z2R9 100 aa15.44■□□□□ 0.06
HLA-C-208ENST00000487245 V9GYY9 64 aa15.44■□□□□ 0.06
HLA-C-208ENST00000487245 IGHV6-1A0A0B4J1U7 121 aa15.43■□□□□ 0.06
HLA-C-208ENST00000487245 IGLV7-46A0A075B6I9 117 aa15.42■□□□□ 0.06
HLA-C-208ENST00000487245 DNAH8Q96JB1 4490 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms