RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-216ENST00000484087 SCXQ7RTU7 201 aa4.4□□□□□ -1.71
BRCA1-216ENST00000484087 FAM19A5Q7Z5A7 132 aaPredicted RBP4.4□□□□□ -1.71
BRCA1-216ENST00000484087 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
BRCA1-216ENST00000484087 HERC1Q15751 4861 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 IGLV1-50A0A075B6I6 118 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 FAM240AA0A1B0GVK7 77 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 ETDCA0A1B0GVM5 59 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 EPM2AB3EWF7 344 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 Q6ZQY7 126 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 Q6ZSA8 131 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 SIGMAR1Q99720 223 aa4.39□□□□□ -1.71
BRCA1-216ENST00000484087 FLG2Q5D862 2391 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-216ENST00000484087 A0A096LNI7 61 aa4.38□□□□□ -1.71
BRCA1-216ENST00000484087 FAM168BA1KXE4 195 aa4.38□□□□□ -1.71
BRCA1-216ENST00000484087 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
BRCA1-216ENST00000484087 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
BRCA1-216ENST00000484087 LAMTOR3Q9UHA4 124 aa4.38□□□□□ -1.71
BRCA1-216ENST00000484087 LRP1Q07954 4544 aaKnown RBP4.37□□□□□ -1.71
BRCA1-216ENST00000484087 RPL37AP8A6NKH3 93 aa4.37□□□□□ -1.71
BRCA1-216ENST00000484087 CIRBP-AS1Q8TBR5 109 aa4.37□□□□□ -1.71
BRCA1-216ENST00000484087 GAGE2AQ6NT46 116 aa4.37□□□□□ -1.71
BRCA1-216ENST00000484087 REG3GQ6UW15 175 aa4.37□□□□□ -1.71
BRCA1-216ENST00000484087 DPH3Q96FX2 82 aa4.37□□□□□ -1.71
BRCA1-216ENST00000484087 OBSCN-AS1Q96MR7 158 aa4.37□□□□□ -1.71
BRCA1-216ENST00000484087 PDE6GP18545 87 aa4.36□□□□□ -1.71
BRCA1-216ENST00000484087 SPRR1AP35321 89 aa4.36□□□□□ -1.71
BRCA1-216ENST00000484087 UBE2BP63146 152 aa4.36□□□□□ -1.71
BRCA1-216ENST00000484087 RBM3P98179 157 aaKnown RBP4.36□□□□□ -1.71
BRCA1-216ENST00000484087 Q6ZRX8 168 aa4.36□□□□□ -1.71
BRCA1-216ENST00000484087 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
BRCA1-216ENST00000484087 PKHD1L1Q86WI1 4243 aa4.35□□□□□ -1.71
BRCA1-216ENST00000484087 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
BRCA1-216ENST00000484087 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
BRCA1-216ENST00000484087 DSCR8Q96T75 97 aa4.35□□□□□ -1.71
BRCA1-216ENST00000484087 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
BRCA1-216ENST00000484087 A0A1B0GV72 72 aa4.34□□□□□ -1.71
BRCA1-216ENST00000484087 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.71
BRCA1-216ENST00000484087 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-216ENST00000484087 CCKP06307 115 aa4.33□□□□□ -1.72
BRCA1-216ENST00000484087 KRTAP10-4P60372 401 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-216ENST00000484087 SCGB1A1P11684 91 aa4.32□□□□□ -1.72
BRCA1-216ENST00000484087 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
BRCA1-216ENST00000484087 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
BRCA1-216ENST00000484087 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
BRCA1-216ENST00000484087 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
BRCA1-216ENST00000484087 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
BRCA1-216ENST00000484087 DEFB105AQ8NG35 78 aa4.31□□□□□ -1.72
BRCA1-216ENST00000484087 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
BRCA1-216ENST00000484087 MT-ATP8P03928 68 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 Q9BRP9 147 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-216ENST00000484087 H0Y9J4 135 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 UBE2AP49459 152 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 Q6ZQT0 140 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 HIGD2AQ9BW72 106 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
BRCA1-216ENST00000484087 IGLV5-48A0A075B6I7 105 aa4.29□□□□□ -1.72
BRCA1-216ENST00000484087 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
BRCA1-216ENST00000484087 F8WEM9 126 aa4.29□□□□□ -1.72
BRCA1-216ENST00000484087 RPL37AP61513 92 aaKnown RBP4.29□□□□□ -1.72
BRCA1-216ENST00000484087 Q8N377 158 aa4.29□□□□□ -1.72
BRCA1-216ENST00000484087 TRBV7-4A0A0J9YYF1 115 aa4.28□□□□□ -1.72
BRCA1-216ENST00000484087 BCE1O60756 84 aa4.28□□□□□ -1.72
BRCA1-216ENST00000484087 PRLHP81277 87 aa4.28□□□□□ -1.72
BRCA1-216ENST00000484087 Q6Q795 121 aa4.28□□□□□ -1.72
BRCA1-216ENST00000484087 SMCR5Q8TEV8 140 aa4.28□□□□□ -1.72
BRCA1-216ENST00000484087 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
BRCA1-216ENST00000484087 ST20-AS1Q8NBB2 130 aa4.27□□□□□ -1.73
BRCA1-216ENST00000484087 LINC00846Q9NV44 126 aa4.27□□□□□ -1.73
BRCA1-216ENST00000484087 TRBV7-7A0A0K0K1E9 115 aa4.26□□□□□ -1.73
BRCA1-216ENST00000484087 A0A1B0GW54 56 aa4.26□□□□□ -1.73
BRCA1-216ENST00000484087 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
BRCA1-216ENST00000484087 LINC01547P58512 204 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-216ENST00000484087 ATP5EP2Q5VTU8 51 aa4.26□□□□□ -1.73
BRCA1-216ENST00000484087 Q6JHZ5 121 aa4.26□□□□□ -1.73
BRCA1-216ENST00000484087 PLAC8Q9NZF1 115 aa4.26□□□□□ -1.73
BRCA1-216ENST00000484087 C1orf137Q5JT78 98 aa4.24□□□□□ -1.73
BRCA1-216ENST00000484087 ZNF706Q9Y5V0 76 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-216ENST00000484087 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
BRCA1-216ENST00000484087 C3orf22Q8N5N4 141 aa4.24□□□□□ -1.73
BRCA1-216ENST00000484087 IGKV3D-7A0A0C4DH55 119 aa4.23□□□□□ -1.73
BRCA1-216ENST00000484087 TNXBP22105 4242 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 SPRR1BP22528 89 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 NREPQ16612 68 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 Q6ZVQ6 151 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
BRCA1-216ENST00000484087 KRTAP29-1A8MX34 341 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-216ENST00000484087 HIST1H4AP62805 103 aaKnown RBP4.21□□□□□ -1.74
BRCA1-216ENST00000484087 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
BRCA1-216ENST00000484087 Q8NBF4 154 aa4.21□□□□□ -1.74
BRCA1-216ENST00000484087 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
BRCA1-216ENST00000484087 ZNF861PO60384 105 aa4.2□□□□□ -1.74
BRCA1-216ENST00000484087 CXCL6P80162 114 aa4.2□□□□□ -1.74
BRCA1-216ENST00000484087 ANAPC13Q9BS18 74 aa4.2□□□□□ -1.74
BRCA1-216ENST00000484087 FAM236AA0A1B0GUQ0 79 aa4.19□□□□□ -1.74
BRCA1-216ENST00000484087 FAM236BA0A1B0GV22 79 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms