RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 C3orf84H3BNL1 204 aa7.49□□□□□ -1.21
RAPGEF3-209ENST00000479866 Q5VV11 94 aa7.48□□□□□ -1.21
RAPGEF3-209ENST00000479866 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
RAPGEF3-209ENST00000479866 PHF5AQ7RTV0 110 aaKnown RBP7.48□□□□□ -1.21
RAPGEF3-209ENST00000479866 SPAG11AQ6PDA7 123 aa7.46□□□□□ -1.21
RAPGEF3-209ENST00000479866 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
RAPGEF3-209ENST00000479866 C22orf24Q9Y442 160 aa7.46□□□□□ -1.22
RAPGEF3-209ENST00000479866 A0A096LNI7 61 aa7.46□□□□□ -1.22
RAPGEF3-209ENST00000479866 IGLV5-52A0A0A0MRZ9 124 aa7.44□□□□□ -1.22
RAPGEF3-209ENST00000479866 Q8NDZ9 215 aa7.44□□□□□ -1.22
RAPGEF3-209ENST00000479866 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
RAPGEF3-209ENST00000479866 KRTAP26-1Q6PEX3 210 aa7.43□□□□□ -1.22
RAPGEF3-209ENST00000479866 LINC00167Q96N53 147 aa7.43□□□□□ -1.22
RAPGEF3-209ENST00000479866 NDUFB1O75438 58 aa7.43□□□□□ -1.22
RAPGEF3-209ENST00000479866 Q8N814 137 aa7.43□□□□□ -1.22
RAPGEF3-209ENST00000479866 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
RAPGEF3-209ENST00000479866 PDE6GP18545 87 aa7.42□□□□□ -1.22
RAPGEF3-209ENST00000479866 PRLHP81277 87 aa7.42□□□□□ -1.22
RAPGEF3-209ENST00000479866 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
RAPGEF3-209ENST00000479866 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
RAPGEF3-209ENST00000479866 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.41□□□□□ -1.22
RAPGEF3-209ENST00000479866 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
RAPGEF3-209ENST00000479866 MOBPQ13875 183 aa7.4□□□□□ -1.22
RAPGEF3-209ENST00000479866 A6NN06 94 aa7.4□□□□□ -1.22
RAPGEF3-209ENST00000479866 LOC101927531A0A1B0GV80 90 aa7.39□□□□□ -1.23
RAPGEF3-209ENST00000479866 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
RAPGEF3-209ENST00000479866 WFDC13Q8IUB5 93 aa7.39□□□□□ -1.23
RAPGEF3-209ENST00000479866 H0Y9J4 135 aa7.38□□□□□ -1.23
RAPGEF3-209ENST00000479866 RTL8CO15255 209 aa7.38□□□□□ -1.23
RAPGEF3-209ENST00000479866 REG3GQ6UW15 175 aa7.37□□□□□ -1.23
RAPGEF3-209ENST00000479866 FBN3Q75N90 2809 aa7.37□□□□□ -1.23
RAPGEF3-209ENST00000479866 A0A087WTM6 91 aa7.37□□□□□ -1.23
RAPGEF3-209ENST00000479866 ERC2-IT1O76042 136 aa7.37□□□□□ -1.23
RAPGEF3-209ENST00000479866 IGLV6-57P01721 117 aa7.36□□□□□ -1.23
RAPGEF3-209ENST00000479866 Q6ZQT0 140 aa7.36□□□□□ -1.23
RAPGEF3-209ENST00000479866 A0A1W2PNN7 141 aa7.35□□□□□ -1.23
RAPGEF3-209ENST00000479866 LINC00476Q8WZB0 136 aa7.35□□□□□ -1.23
RAPGEF3-209ENST00000479866 TNP2Q05952 138 aa7.33□□□□□ -1.24
RAPGEF3-209ENST00000479866 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
RAPGEF3-209ENST00000479866 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
RAPGEF3-209ENST00000479866 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
RAPGEF3-209ENST00000479866 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
RAPGEF3-209ENST00000479866 ST20-AS1Q8NBB2 130 aa7.32□□□□□ -1.24
RAPGEF3-209ENST00000479866 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
RAPGEF3-209ENST00000479866 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
RAPGEF3-209ENST00000479866 ELOF1P60002 83 aaKnown RBP7.31□□□□□ -1.24
RAPGEF3-209ENST00000479866 C1orf137Q5JT78 98 aa7.31□□□□□ -1.24
RAPGEF3-209ENST00000479866 DNHD1Q96M86 4753 aa7.3□□□□□ -1.24
RAPGEF3-209ENST00000479866 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
RAPGEF3-209ENST00000479866 OBSCN-AS1Q96MR7 158 aa7.29□□□□□ -1.24
RAPGEF3-209ENST00000479866 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
RAPGEF3-209ENST00000479866 TLX1NBP0CAT3 122 aa7.29□□□□□ -1.24
RAPGEF3-209ENST00000479866 CNBPP62633 177 aaKnown RBP7.28□□□□□ -1.24
RAPGEF3-209ENST00000479866 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
RAPGEF3-209ENST00000479866 IGLV9-49A0A0B4J1Y8 123 aa7.28□□□□□ -1.24
RAPGEF3-209ENST00000479866 IGHV6-1A0A0B4J1U7 121 aa7.27□□□□□ -1.25
RAPGEF3-209ENST00000479866 Q6ZRX8 168 aa7.27□□□□□ -1.25
RAPGEF3-209ENST00000479866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.27□□□□□ -1.25
RAPGEF3-209ENST00000479866 ANK2Q01484 3957 aa7.27□□□□□ -1.25
RAPGEF3-209ENST00000479866 KCNQ1DNQ9H478 68 aa7.26□□□□□ -1.25
RAPGEF3-209ENST00000479866 HUWE1Q7Z6Z7 4374 aaKnown RBP7.26□□□□□ -1.25
RAPGEF3-209ENST00000479866 Q75L30 129 aa7.26□□□□□ -1.25
RAPGEF3-209ENST00000479866 KRTAP21-3Q3LHN1 58 aa7.25□□□□□ -1.25
RAPGEF3-209ENST00000479866 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
RAPGEF3-209ENST00000479866 COA5Q86WW8 74 aa7.25□□□□□ -1.25
RAPGEF3-209ENST00000479866 SPINK7P58062 85 aa7.24□□□□□ -1.25
RAPGEF3-209ENST00000479866 PANO1I0J062 215 aa7.23□□□□□ -1.25
RAPGEF3-209ENST00000479866 IGKV4-1P06312 121 aa7.23□□□□□ -1.25
RAPGEF3-209ENST00000479866 A0A0G2JQZ4 141 aa7.22□□□□□ -1.25
RAPGEF3-209ENST00000479866 H3BQ85 93 aa7.22□□□□□ -1.25
RAPGEF3-209ENST00000479866 H0Y9P7 68 aa7.21□□□□□ -1.26
RAPGEF3-209ENST00000479866 Q9BRP9 147 aa7.21□□□□□ -1.26
RAPGEF3-209ENST00000479866 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.26
RAPGEF3-209ENST00000479866 LOC110117498A0A087WWA1 95 aa7.2□□□□□ -1.26
RAPGEF3-209ENST00000479866 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
RAPGEF3-209ENST00000479866 Q6ZR54 194 aa7.19□□□□□ -1.26
RAPGEF3-209ENST00000479866 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
RAPGEF3-209ENST00000479866 PLA2G2DQ9UNK4 145 aa7.19□□□□□ -1.26
RAPGEF3-209ENST00000479866 KRTAP10-2P60368 255 aa7.18□□□□□ -1.26
RAPGEF3-209ENST00000479866 ANAPC11Q9NYG5 84 aa7.18□□□□□ -1.26
RAPGEF3-209ENST00000479866 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
RAPGEF3-209ENST00000479866 Q8N377 158 aa7.17□□□□□ -1.26
RAPGEF3-209ENST00000479866 SMR3BP02814 79 aaPredicted RBP7.17□□□□□ -1.26
RAPGEF3-209ENST00000479866 PSORS1C2Q9UIG4 136 aa7.16□□□□□ -1.26
RAPGEF3-209ENST00000479866 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
RAPGEF3-209ENST00000479866 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.26
RAPGEF3-209ENST00000479866 KRTAP7-1Q8IUC3 87 aa7.15□□□□□ -1.26
RAPGEF3-209ENST00000479866 A0A087WSZ3 146 aa7.14□□□□□ -1.27
RAPGEF3-209ENST00000479866 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
RAPGEF3-209ENST00000479866 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
RAPGEF3-209ENST00000479866 CIRBP-AS1Q8TBR5 109 aa7.13□□□□□ -1.27
RAPGEF3-209ENST00000479866 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
RAPGEF3-209ENST00000479866 CDK2AP2O75956 126 aa7.13□□□□□ -1.27
RAPGEF3-209ENST00000479866 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
RAPGEF3-209ENST00000479866 KRTAP11-1Q8IUC1 163 aa7.11□□□□□ -1.27
RAPGEF3-209ENST00000479866 CMYA5Q8N3K9 4069 aa7.11□□□□□ -1.27
RAPGEF3-209ENST00000479866 PRKDCP78527 4128 aaKnown RBP7.1□□□□□ -1.27
RAPGEF3-209ENST00000479866 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
RAPGEF3-209ENST00000479866 K7EQZ3 153 aa7.08□□□□□ -1.28
RAPGEF3-209ENST00000479866 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms