RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMEM170BQ5T4T1 132 aa5.05□□□□□ -1.6
CDHR3-209ENST00000472116 MAP1LC3CQ9BXW4 147 aa5.05□□□□□ -1.6
CDHR3-209ENST00000472116 A0A096LNJ9 63 aa5.04□□□□□ -1.6
CDHR3-209ENST00000472116 PMCHL1Q16048 86 aa5.04□□□□□ -1.6
CDHR3-209ENST00000472116 Q6ZVH6 145 aa5.04□□□□□ -1.6
CDHR3-209ENST00000472116 IFI27L1Q96BM0 104 aa5.04□□□□□ -1.6
CDHR3-209ENST00000472116 ZNF73O43830 326 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-209ENST00000472116 PET117Q6UWS5 81 aa5.03□□□□□ -1.6
CDHR3-209ENST00000472116 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
CDHR3-209ENST00000472116 KRTDAPP60985 99 aa5.02□□□□□ -1.61
CDHR3-209ENST00000472116 TAL2Q16559 108 aa5.02□□□□□ -1.61
CDHR3-209ENST00000472116 SPANXB1Q9NS25 103 aaPredicted RBP5.02□□□□□ -1.61
CDHR3-209ENST00000472116 CBY1Q9Y3M2 126 aa5.02□□□□□ -1.61
CDHR3-209ENST00000472116 KMT2DO14686 5537 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 SYS1-DBNDD2H3BUS1 97 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 C3orf79P0CE67 100 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 HERV-K104P63124 156 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 Q96NJ1 140 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 MIEN1Q9BRT3 115 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 DHRS4-AS1Q9P1J3 65 aa5.01□□□□□ -1.61
CDHR3-209ENST00000472116 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
CDHR3-209ENST00000472116 SMIM6P0DI80 62 aa5□□□□□ -1.61
CDHR3-209ENST00000472116 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
CDHR3-209ENST00000472116 DEFB105AQ8NG35 78 aa5□□□□□ -1.61
CDHR3-209ENST00000472116 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
CDHR3-209ENST00000472116 SCGB1D1O95968 90 aa4.99□□□□□ -1.61
CDHR3-209ENST00000472116 PLNP26678 52 aa4.99□□□□□ -1.61
CDHR3-209ENST00000472116 LINC01545Q5VT33 79 aa4.99□□□□□ -1.61
CDHR3-209ENST00000472116 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
CDHR3-209ENST00000472116 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
CDHR3-209ENST00000472116 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
CDHR3-209ENST00000472116 TEX49A0A1B0GTD5 131 aa4.97□□□□□ -1.61
CDHR3-209ENST00000472116 A6NN06 94 aa4.97□□□□□ -1.61
CDHR3-209ENST00000472116 H0Y8G0 127 aa4.97□□□□□ -1.61
CDHR3-209ENST00000472116 DPM2O94777 84 aa4.97□□□□□ -1.61
CDHR3-209ENST00000472116 MTURNQ8N3F0 131 aa4.97□□□□□ -1.61
CDHR3-209ENST00000472116 A8MWP4 228 aa4.96□□□□□ -1.62
CDHR3-209ENST00000472116 HSBP1L1C9JCN9 74 aa4.96□□□□□ -1.62
CDHR3-209ENST00000472116 IGKCP01834 107 aa4.96□□□□□ -1.62
CDHR3-209ENST00000472116 PYY3Q5JQD4 70 aa4.96□□□□□ -1.62
CDHR3-209ENST00000472116 IGFL1Q6UW32 110 aa4.96□□□□□ -1.62
CDHR3-209ENST00000472116 MYMXA0A1B0GTQ4 84 aa4.94□□□□□ -1.62
CDHR3-209ENST00000472116 NDUFC2O95298 119 aa4.94□□□□□ -1.62
CDHR3-209ENST00000472116 HERVK_113P61574 105 aa4.94□□□□□ -1.62
CDHR3-209ENST00000472116 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
CDHR3-209ENST00000472116 TMEM223A0PJW6 202 aa4.92□□□□□ -1.62
CDHR3-209ENST00000472116 LINC00518Q8N0U6 118 aa4.92□□□□□ -1.62
CDHR3-209ENST00000472116 C12orf57Q99622 126 aa4.92□□□□□ -1.62
CDHR3-209ENST00000472116 PMCHL2Q9BQD1 86 aa4.92□□□□□ -1.62
CDHR3-209ENST00000472116 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
CDHR3-209ENST00000472116 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
CDHR3-209ENST00000472116 A8MUU9 505 aa4.91□□□□□ -1.62
CDHR3-209ENST00000472116 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
CDHR3-209ENST00000472116 E9PLD3 99 aa4.9□□□□□ -1.63
CDHR3-209ENST00000472116 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
CDHR3-209ENST00000472116 TSTD3H0UI37 97 aa4.89□□□□□ -1.63
CDHR3-209ENST00000472116 COX7BP24311 80 aa4.89□□□□□ -1.63
CDHR3-209ENST00000472116 SPATA45Q537H7 98 aa4.89□□□□□ -1.63
CDHR3-209ENST00000472116 OR13C6PQ8NH95 151 aa4.89□□□□□ -1.63
CDHR3-209ENST00000472116 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
CDHR3-209ENST00000472116 PAM16Q9Y3D7 125 aa4.89□□□□□ -1.63
CDHR3-209ENST00000472116 F8WEM9 126 aa4.88□□□□□ -1.63
CDHR3-209ENST00000472116 LEPROTO15243 131 aa4.88□□□□□ -1.63
CDHR3-209ENST00000472116 HRES1P13985 223 aa4.88□□□□□ -1.63
CDHR3-209ENST00000472116 NMUP48645 174 aa4.88□□□□□ -1.63
CDHR3-209ENST00000472116 J3QQQ9 107 aa4.87□□□□□ -1.63
CDHR3-209ENST00000472116 DLEU1O43261 78 aa4.87□□□□□ -1.63
CDHR3-209ENST00000472116 COX8AP10176 69 aa4.87□□□□□ -1.63
CDHR3-209ENST00000472116 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
CDHR3-209ENST00000472116 UQCR10Q9UDW1 63 aa4.86□□□□□ -1.63
CDHR3-209ENST00000472116 LST1O00453 97 aa4.85□□□□□ -1.63
CDHR3-209ENST00000472116 NPC2P61916 151 aa4.85□□□□□ -1.63
CDHR3-209ENST00000472116 TRBV7-7A0A0K0K1E9 115 aa4.84□□□□□ -1.63
CDHR3-209ENST00000472116 ZNF815PA8K554 130 aa4.84□□□□□ -1.63
CDHR3-209ENST00000472116 SPRR2EP22531 72 aa4.84□□□□□ -1.63
CDHR3-209ENST00000472116 SPRR2BP35325 72 aa4.84□□□□□ -1.63
CDHR3-209ENST00000472116 SPRR2AP35326 72 aa4.84□□□□□ -1.63
CDHR3-209ENST00000472116 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
CDHR3-209ENST00000472116 C14orf144Q96I85 54 aa4.83□□□□□ -1.64
CDHR3-209ENST00000472116 TIMM17BO60830 172 aa4.82□□□□□ -1.64
CDHR3-209ENST00000472116 TSPEAR-AS2P59090 65 aa4.82□□□□□ -1.64
CDHR3-209ENST00000472116 SCGB1D4Q6XE38 83 aa4.82□□□□□ -1.64
CDHR3-209ENST00000472116 COPS9Q8WXC6 57 aa4.82□□□□□ -1.64
CDHR3-209ENST00000472116 HIGD1BQ9P298 99 aa4.82□□□□□ -1.64
CDHR3-209ENST00000472116 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
CDHR3-209ENST00000472116 Q6JHZ5 121 aa4.81□□□□□ -1.64
CDHR3-209ENST00000472116 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
CDHR3-209ENST00000472116 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
CDHR3-209ENST00000472116 CLEC2BQ92478 149 aa4.8□□□□□ -1.64
CDHR3-209ENST00000472116 SPANXDQ9BXN6 97 aa4.8□□□□□ -1.64
CDHR3-209ENST00000472116 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
CDHR3-209ENST00000472116 SOSTDC1Q6X4U4 206 aa4.79□□□□□ -1.64
CDHR3-209ENST00000472116 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
CDHR3-209ENST00000472116 SPANXCQ9NY87 97 aa4.79□□□□□ -1.64
CDHR3-209ENST00000472116 IFITM1P13164 125 aa4.78□□□□□ -1.64
CDHR3-209ENST00000472116 HSD52Q0P140 79 aa4.78□□□□□ -1.64
CDHR3-209ENST00000472116 C2orf91Q6ZV80 131 aa4.78□□□□□ -1.64
CDHR3-209ENST00000472116 NHP2Q9NX24 153 aaKnown RBP4.78□□□□□ -1.64
CDHR3-209ENST00000472116 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms