RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 C1orf134Q5TEV5 83 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 BRD3OSQ6XYD6 125 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 C5orf56Q8N8D9 126 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 Q9BRP9 147 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
COL8A1-205ENST00000463753 LINC00959A0A1B0GUT2 108 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 H0Y9P7 68 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 H3BQ85 93 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 ODF3L2Q3SX64 289 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 XAGE1AQ9HD64 81 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 FLNCQ14315 2725 aa2.35□□□□□ -2.03
COL8A1-205ENST00000463753 PCOTHQ58A44 107 aa2.34□□□□□ -2.03
COL8A1-205ENST00000463753 Q8IZM0 81 aa2.34□□□□□ -2.03
COL8A1-205ENST00000463753 MINOS1-NBL1R4GNA1 71 aa2.34□□□□□ -2.03
COL8A1-205ENST00000463753 CMYA5Q8N3K9 4069 aa2.34□□□□□ -2.03
COL8A1-205ENST00000463753 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
COL8A1-205ENST00000463753 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
COL8A1-205ENST00000463753 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.04
COL8A1-205ENST00000463753 DSCR10P59022 87 aa2.34□□□□□ -2.04
COL8A1-205ENST00000463753 DEFB136Q30KP8 78 aa2.34□□□□□ -2.04
COL8A1-205ENST00000463753 A0A096LPF7 62 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 USMG5Q96IX5 58 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 MTORP42345 2549 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 IGLV1-51P01701 117 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 IGHV4-30-4P0DP06 118 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 KIAA0087Q14695 138 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 DEFB114Q30KQ6 69 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 UNQ6190/PRO20217Q6UXQ8 127 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 Q6ZR54 194 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 KCNQ1DNQ9H478 68 aa2.33□□□□□ -2.04
COL8A1-205ENST00000463753 NOP10Q9NPE3 64 aaKnown RBP2.33□□□□□ -2.04
COL8A1-205ENST00000463753 HECTD4Q9Y4D8 3996 aa2.32□□□□□ -2.04
COL8A1-205ENST00000463753 COX17Q14061 63 aa2.32□□□□□ -2.04
COL8A1-205ENST00000463753 MAP1AP78559 2803 aaPredicted RBP2.32□□□□□ -2.04
COL8A1-205ENST00000463753 IGHV4-59P01825 116 aa2.32□□□□□ -2.04
COL8A1-205ENST00000463753 KLK9Q2XQG4 91 aa2.32□□□□□ -2.04
COL8A1-205ENST00000463753 C10orf99Q6UWK7 81 aa2.32□□□□□ -2.04
COL8A1-205ENST00000463753 A6NDX4 124 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 RPL37AP61513 92 aaKnown RBP2.31□□□□□ -2.04
COL8A1-205ENST00000463753 KRTAP15-1Q3LI76 137 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 C1orf137Q5JT78 98 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 EPPK1P58107 5090 aaKnown RBP2.31□□□□□ -2.04
COL8A1-205ENST00000463753 IGLV1-50A0A075B6I6 118 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 IGHV6-1A0A0B4J1U7 121 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 A0A1W2PNN7 141 aa2.31□□□□□ -2.04
COL8A1-205ENST00000463753 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
COL8A1-205ENST00000463753 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
COL8A1-205ENST00000463753 H3BUX3 64 aa2.3□□□□□ -2.04
COL8A1-205ENST00000463753 RTL8CO15255 209 aa2.3□□□□□ -2.04
COL8A1-205ENST00000463753 ANGP03950 147 aaKnown RBP2.3□□□□□ -2.04
COL8A1-205ENST00000463753 C7orf33Q8WU49 177 aa2.3□□□□□ -2.04
COL8A1-205ENST00000463753 Q8N377 158 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 C9orf163Q8N9P6 203 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 JMJD1CQ15652 2540 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 IGLV7-46A0A075B6I9 117 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 A0A1B0GVY2 172 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 ROMO1P60602 79 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 PLAC8Q9NZF1 115 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 CCDC168Q8NDH2 2452 aa2.29□□□□□ -2.04
COL8A1-205ENST00000463753 Q8NBF4 154 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 MAP6D1Q9H9H5 199 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 DEFB130BP0DP73 79 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 DEFB130AP0DP74 79 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 HRES1P13985 223 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 CNBPP62633 177 aaKnown RBP2.28□□□□□ -2.04
COL8A1-205ENST00000463753 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 HYDINQ4G0P3 5121 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 ITPR3Q14573 2671 aa2.28□□□□□ -2.04
COL8A1-205ENST00000463753 SACSQ9NZJ4 4579 aa2.28□□□□□ -2.05
COL8A1-205ENST00000463753 H3BUA1 57 aa2.28□□□□□ -2.05
COL8A1-205ENST00000463753 REG3GQ6UW15 175 aa2.28□□□□□ -2.05
COL8A1-205ENST00000463753 DYNC1H1Q14204 4646 aaKnown RBP2.28□□□□□ -2.05
COL8A1-205ENST00000463753 CSPG4Q6UVK1 2322 aa2.28□□□□□ -2.05
COL8A1-205ENST00000463753 IGLV5-48A0A075B6I7 105 aa2.27□□□□□ -2.05
COL8A1-205ENST00000463753 IGHV4-61A0A0C4DH41 118 aa2.27□□□□□ -2.05
COL8A1-205ENST00000463753 KRTAP29-1A8MX34 341 aaPredicted RBP2.27□□□□□ -2.05
COL8A1-205ENST00000463753 H3BPC8 53 aa2.27□□□□□ -2.05
COL8A1-205ENST00000463753 DNAH17Q9UFH2 4485 aa2.27□□□□□ -2.05
COL8A1-205ENST00000463753 KMT2CQ8NEZ4 4911 aaKnown RBP2.27□□□□□ -2.05
COL8A1-205ENST00000463753 A0A087WSZ3 146 aa2.27□□□□□ -2.05
COL8A1-205ENST00000463753 C6orf48Q9UBA6 75 aa2.26□□□□□ -2.05
COL8A1-205ENST00000463753 VPS13CQ709C8 3753 aa2.26□□□□□ -2.05
COL8A1-205ENST00000463753 HUWE1Q7Z6Z7 4374 aaKnown RBP2.26□□□□□ -2.05
COL8A1-205ENST00000463753 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
COL8A1-205ENST00000463753 A0A1B0GU69 56 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 A0A1W2PPR1 153 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 ASB16-AS1Q495Z4 193 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 IGLV5-37A0A075B6J1 123 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 RPL37AP8A6NKH3 93 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 MXRA5Q9NR99 2828 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 IGLV8-61A0A075B6I0 122 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 SPRR4Q96PI1 79 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 CAMK2N2Q96S95 79 aa2.25□□□□□ -2.05
COL8A1-205ENST00000463753 DNAH9Q9NYC9 4486 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms