RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
APTX-209ENST00000460940 COX7B2Q8TF08 81 aa7.05□□□□□ -1.28
APTX-209ENST00000460940 C6orf48Q9UBA6 75 aa7.05□□□□□ -1.28
APTX-209ENST00000460940 A0A096LNI7 61 aa7.04□□□□□ -1.28
APTX-209ENST00000460940 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
APTX-209ENST00000460940 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
APTX-209ENST00000460940 C10orf25Q5T742 122 aa7.04□□□□□ -1.28
APTX-209ENST00000460940 IGKV2-24A0A0C4DH68 120 aa7.04□□□□□ -1.28
APTX-209ENST00000460940 TRBV7-6A0A0J9YX20 115 aa7.04□□□□□ -1.28
APTX-209ENST00000460940 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
APTX-209ENST00000460940 F8WEM9 126 aa7.02□□□□□ -1.28
APTX-209ENST00000460940 FAM229AH3BQW9 127 aa7.02□□□□□ -1.28
APTX-209ENST00000460940 TMEM256-PLSCR3K7ERE1 68 aa7.02□□□□□ -1.28
APTX-209ENST00000460940 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.28
APTX-209ENST00000460940 Q5VSD8 79 aa7.02□□□□□ -1.29
APTX-209ENST00000460940 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
APTX-209ENST00000460940 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
APTX-209ENST00000460940 FAT1Q14517 4588 aa7.01□□□□□ -1.29
APTX-209ENST00000460940 RBM3P98179 157 aaKnown RBP7□□□□□ -1.29
APTX-209ENST00000460940 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
APTX-209ENST00000460940 ERC2-IT1O76042 136 aa7□□□□□ -1.29
APTX-209ENST00000460940 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
APTX-209ENST00000460940 Q6ZRP5 223 aa7□□□□□ -1.29
APTX-209ENST00000460940 VPS13BQ7Z7G8 4022 aa6.99□□□□□ -1.29
APTX-209ENST00000460940 LOC110117498A0A087WWA1 95 aa6.99□□□□□ -1.29
APTX-209ENST00000460940 CXCL6P80162 114 aa6.99□□□□□ -1.29
APTX-209ENST00000460940 LINC00158P58513 81 aa6.98□□□□□ -1.29
APTX-209ENST00000460940 C9orf116Q5BN46 136 aaPredicted RBP6.98□□□□□ -1.29
APTX-209ENST00000460940 TRBV7-4A0A0J9YYF1 115 aa6.98□□□□□ -1.29
APTX-209ENST00000460940 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
APTX-209ENST00000460940 Q6ZQT0 140 aa6.97□□□□□ -1.29
APTX-209ENST00000460940 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
APTX-209ENST00000460940 SNURFQ9Y675 71 aa6.97□□□□□ -1.29
APTX-209ENST00000460940 LINC01547P58512 204 aaPredicted RBP6.96□□□□□ -1.29
APTX-209ENST00000460940 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.3
APTX-209ENST00000460940 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
APTX-209ENST00000460940 PDE6GP18545 87 aa6.95□□□□□ -1.3
APTX-209ENST00000460940 A0A1W2PNN7 141 aa6.94□□□□□ -1.3
APTX-209ENST00000460940 COX17Q14061 63 aa6.94□□□□□ -1.3
APTX-209ENST00000460940 H3BQ85 93 aa6.94□□□□□ -1.3
APTX-209ENST00000460940 Q6ZVQ6 151 aa6.94□□□□□ -1.3
APTX-209ENST00000460940 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
APTX-209ENST00000460940 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
APTX-209ENST00000460940 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
APTX-209ENST00000460940 XAGE1AQ9HD64 81 aa6.92□□□□□ -1.3
APTX-209ENST00000460940 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
APTX-209ENST00000460940 NREPQ16612 68 aa6.9□□□□□ -1.3
APTX-209ENST00000460940 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
APTX-209ENST00000460940 PRR3P79522 188 aaKnown RBP6.9□□□□□ -1.31
APTX-209ENST00000460940 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
APTX-209ENST00000460940 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
APTX-209ENST00000460940 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
APTX-209ENST00000460940 H3BS24 57 aa6.88□□□□□ -1.31
APTX-209ENST00000460940 PRYO14603 147 aa6.88□□□□□ -1.31
APTX-209ENST00000460940 SERTAD4-AS1Q5TG53 156 aa6.88□□□□□ -1.31
APTX-209ENST00000460940 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
APTX-209ENST00000460940 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
APTX-209ENST00000460940 LINC00575Q6W349 94 aa6.87□□□□□ -1.31
APTX-209ENST00000460940 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
APTX-209ENST00000460940 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
APTX-209ENST00000460940 UBE2BP63146 152 aa6.86□□□□□ -1.31
APTX-209ENST00000460940 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
APTX-209ENST00000460940 NKAPP1Q8N9T2 125 aa6.85□□□□□ -1.31
APTX-209ENST00000460940 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
APTX-209ENST00000460940 BPY2O14599 106 aa6.85□□□□□ -1.31
APTX-209ENST00000460940 Q1T7F1 81 aa6.84□□□□□ -1.31
APTX-209ENST00000460940 KTN1-AS1Q86SY8 53 aa6.84□□□□□ -1.31
APTX-209ENST00000460940 VPREB1P12018 145 aa6.83□□□□□ -1.32
APTX-209ENST00000460940 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
APTX-209ENST00000460940 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
APTX-209ENST00000460940 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
APTX-209ENST00000460940 C1orf137Q5JT78 98 aa6.82□□□□□ -1.32
APTX-209ENST00000460940 hDV103S1A0JD37 113 aa6.81□□□□□ -1.32
APTX-209ENST00000460940 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
APTX-209ENST00000460940 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
APTX-209ENST00000460940 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
APTX-209ENST00000460940 SPINK6Q6UWN8 80 aa6.81□□□□□ -1.32
APTX-209ENST00000460940 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
APTX-209ENST00000460940 Q8NDZ9 215 aa6.79□□□□□ -1.32
APTX-209ENST00000460940 RPL37AP8A6NKH3 93 aa6.78□□□□□ -1.32
APTX-209ENST00000460940 M0R378 163 aa6.78□□□□□ -1.32
APTX-209ENST00000460940 IGKV4-1P06312 121 aa6.78□□□□□ -1.32
APTX-209ENST00000460940 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
APTX-209ENST00000460940 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
APTX-209ENST00000460940 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
APTX-209ENST00000460940 NDUFS5O43920 106 aa6.77□□□□□ -1.33
APTX-209ENST00000460940 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
APTX-209ENST00000460940 COX7BP24311 80 aa6.76□□□□□ -1.33
APTX-209ENST00000460940 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
APTX-209ENST00000460940 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
APTX-209ENST00000460940 Q6ZQY7 126 aa6.75□□□□□ -1.33
APTX-209ENST00000460940 IGLV6-57P01721 117 aa6.75□□□□□ -1.33
APTX-209ENST00000460940 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
APTX-209ENST00000460940 ZNF861PO60384 105 aa6.74□□□□□ -1.33
APTX-209ENST00000460940 H0Y9J4 135 aa6.73□□□□□ -1.33
APTX-209ENST00000460940 J3QL48 77 aa6.73□□□□□ -1.33
APTX-209ENST00000460940 PRR26Q8N8Z3 221 aa6.73□□□□□ -1.33
APTX-209ENST00000460940 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
APTX-209ENST00000460940 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
APTX-209ENST00000460940 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms