RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 Q5VV11 94 aa7.74□□□□□ -1.17
COL27A1-202ENST00000451716 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
COL27A1-202ENST00000451716 IGLV1-50A0A075B6I6 118 aa7.73□□□□□ -1.17
COL27A1-202ENST00000451716 IGKV2-24A0A0C4DH68 120 aa7.73□□□□□ -1.17
COL27A1-202ENST00000451716 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
COL27A1-202ENST00000451716 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.73□□□□□ -1.17
COL27A1-202ENST00000451716 PSCAO43653 123 aa7.73□□□□□ -1.17
COL27A1-202ENST00000451716 Q9BRP9 147 aa7.73□□□□□ -1.17
COL27A1-202ENST00000451716 HIGD2AQ9BW72 106 aa7.73□□□□□ -1.17
COL27A1-202ENST00000451716 H3BQ85 93 aa7.72□□□□□ -1.17
COL27A1-202ENST00000451716 BPY2O14599 106 aa7.72□□□□□ -1.17
COL27A1-202ENST00000451716 APLNQ9ULZ1 77 aa7.72□□□□□ -1.17
COL27A1-202ENST00000451716 PLA2G2DQ9UNK4 145 aa7.72□□□□□ -1.17
COL27A1-202ENST00000451716 MEGF8Q7Z7M0 2845 aa7.72□□□□□ -1.17
COL27A1-202ENST00000451716 Q6ZRX8 168 aa7.71□□□□□ -1.18
COL27A1-202ENST00000451716 Q8N377 158 aa7.71□□□□□ -1.18
COL27A1-202ENST00000451716 ST20-AS1Q8NBB2 130 aa7.71□□□□□ -1.18
COL27A1-202ENST00000451716 ETDCA0A1B0GVM5 59 aa7.7□□□□□ -1.18
COL27A1-202ENST00000451716 SCXQ7RTU7 201 aa7.7□□□□□ -1.18
COL27A1-202ENST00000451716 KRTAP4-16G5E9R7 235 aaPredicted RBP7.7□□□□□ -1.18
COL27A1-202ENST00000451716 PRKDCP78527 4128 aaKnown RBP7.7□□□□□ -1.18
COL27A1-202ENST00000451716 A0A096LNI7 61 aa7.69□□□□□ -1.18
COL27A1-202ENST00000451716 PDE6GP18545 87 aa7.69□□□□□ -1.18
COL27A1-202ENST00000451716 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
COL27A1-202ENST00000451716 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
COL27A1-202ENST00000451716 CXCL6P80162 114 aa7.68□□□□□ -1.18
COL27A1-202ENST00000451716 DYNC2H1Q8NCM8 4307 aaKnown RBP7.68□□□□□ -1.18
COL27A1-202ENST00000451716 A0A1W2PNN7 141 aa7.67□□□□□ -1.18
COL27A1-202ENST00000451716 SPRR1AP35321 89 aa7.67□□□□□ -1.18
COL27A1-202ENST00000451716 STARD9Q9P2P6 4700 aa7.67□□□□□ -1.18
COL27A1-202ENST00000451716 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
COL27A1-202ENST00000451716 CHTF8P0CG12 524 aa7.66□□□□□ -1.18
COL27A1-202ENST00000451716 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
COL27A1-202ENST00000451716 C3orf84H3BNL1 204 aa7.65□□□□□ -1.18
COL27A1-202ENST00000451716 REG3GQ6UW15 175 aa7.64□□□□□ -1.19
COL27A1-202ENST00000451716 OCR1Q9BZK8 76 aa7.63□□□□□ -1.19
COL27A1-202ENST00000451716 LINC00313P59037 77 aa7.63□□□□□ -1.19
COL27A1-202ENST00000451716 CNBPP62633 177 aaKnown RBP7.63□□□□□ -1.19
COL27A1-202ENST00000451716 PRLHP81277 87 aa7.63□□□□□ -1.19
COL27A1-202ENST00000451716 PRR4Q16378 134 aa7.63□□□□□ -1.19
COL27A1-202ENST00000451716 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
COL27A1-202ENST00000451716 Q8N9L7 120 aa7.62□□□□□ -1.19
COL27A1-202ENST00000451716 A6NED7 52 aa7.61□□□□□ -1.19
COL27A1-202ENST00000451716 IGLV5-48A0A075B6I7 105 aa7.61□□□□□ -1.19
COL27A1-202ENST00000451716 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
COL27A1-202ENST00000451716 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
COL27A1-202ENST00000451716 A0A0G2JQZ4 141 aa7.6□□□□□ -1.19
COL27A1-202ENST00000451716 NBDYA0A0U1RRE5 68 aa7.6□□□□□ -1.19
COL27A1-202ENST00000451716 PRAC1Q96KF2 57 aa7.59□□□□□ -1.19
COL27A1-202ENST00000451716 KMT2AQ03164 3969 aa7.58□□□□□ -1.2
COL27A1-202ENST00000451716 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
COL27A1-202ENST00000451716 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
COL27A1-202ENST00000451716 NUPR2A6NF83 97 aa7.57□□□□□ -1.2
COL27A1-202ENST00000451716 TNP2Q05952 138 aa7.57□□□□□ -1.2
COL27A1-202ENST00000451716 PANO1I0J062 215 aa7.57□□□□□ -1.2
COL27A1-202ENST00000451716 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
COL27A1-202ENST00000451716 MOBPQ13875 183 aa7.56□□□□□ -1.2
COL27A1-202ENST00000451716 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
COL27A1-202ENST00000451716 VPS13DQ5THJ4 4388 aa7.56□□□□□ -1.2
COL27A1-202ENST00000451716 Q6ZRN7 208 aaPredicted RBP7.55□□□□□ -1.2
COL27A1-202ENST00000451716 C9orf163Q8N9P6 203 aa7.55□□□□□ -1.2
COL27A1-202ENST00000451716 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
COL27A1-202ENST00000451716 Q8N9P0 234 aaPredicted RBP7.54□□□□□ -1.2
COL27A1-202ENST00000451716 CYP4F30PQ9H0H9 118 aa7.53□□□□□ -1.2
COL27A1-202ENST00000451716 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
COL27A1-202ENST00000451716 MP68P56378 58 aa7.53□□□□□ -1.2
COL27A1-202ENST00000451716 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
COL27A1-202ENST00000451716 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
COL27A1-202ENST00000451716 FBN3Q75N90 2809 aa7.52□□□□□ -1.21
COL27A1-202ENST00000451716 Q8NBF4 154 aa7.52□□□□□ -1.21
COL27A1-202ENST00000451716 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
COL27A1-202ENST00000451716 IGKV4-1P06312 121 aa7.51□□□□□ -1.21
COL27A1-202ENST00000451716 Q75L30 129 aa7.51□□□□□ -1.21
COL27A1-202ENST00000451716 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
COL27A1-202ENST00000451716 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
COL27A1-202ENST00000451716 HECTD4Q9Y4D8 3996 aa7.48□□□□□ -1.21
COL27A1-202ENST00000451716 ZNF706Q9Y5V0 76 aaPredicted RBP7.48□□□□□ -1.21
COL27A1-202ENST00000451716 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
COL27A1-202ENST00000451716 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
COL27A1-202ENST00000451716 DEFB116Q30KQ4 102 aa7.47□□□□□ -1.21
COL27A1-202ENST00000451716 A0A087WTM6 91 aa7.45□□□□□ -1.22
COL27A1-202ENST00000451716 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
COL27A1-202ENST00000451716 FRAS1Q86XX4 4008 aa7.45□□□□□ -1.22
COL27A1-202ENST00000451716 A0A087WSZ3 146 aa7.44□□□□□ -1.22
COL27A1-202ENST00000451716 DSCR10P59022 87 aa7.43□□□□□ -1.22
COL27A1-202ENST00000451716 LCE6AA0A183 80 aa7.43□□□□□ -1.22
COL27A1-202ENST00000451716 SPACA4Q8TDM5 124 aa7.43□□□□□ -1.22
COL27A1-202ENST00000451716 A0A1B0GW54 56 aa7.42□□□□□ -1.22
COL27A1-202ENST00000451716 K7EQZ3 153 aa7.42□□□□□ -1.22
COL27A1-202ENST00000451716 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
COL27A1-202ENST00000451716 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
COL27A1-202ENST00000451716 H0Y9J4 135 aa7.41□□□□□ -1.22
COL27A1-202ENST00000451716 RTL8CO15255 209 aa7.41□□□□□ -1.22
COL27A1-202ENST00000451716 LINC00208Q96KT6 92 aa7.41□□□□□ -1.22
COL27A1-202ENST00000451716 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.23
COL27A1-202ENST00000451716 Q6ZR54 194 aa7.4□□□□□ -1.23
COL27A1-202ENST00000451716 DNAH17Q9UFH2 4485 aa7.39□□□□□ -1.23
COL27A1-202ENST00000451716 DNAH8Q96JB1 4490 aa7.39□□□□□ -1.23
COL27A1-202ENST00000451716 KRTAP13-1Q8IUC0 172 aa7.38□□□□□ -1.23
COL27A1-202ENST00000451716 LY6G6CO95867 125 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms