RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SPAG11BQ08648 103 aa12.33□□□□□ -0.44
CCDC50-202ENST00000392456 PRR4Q16378 134 aa12.33□□□□□ -0.44
CCDC50-202ENST00000392456 Q6ZQY7 126 aa12.33□□□□□ -0.44
CCDC50-202ENST00000392456 HIGD2BQ4VC39 106 aa12.32□□□□□ -0.44
CCDC50-202ENST00000392456 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
CCDC50-202ENST00000392456 SMIM29Q86T20 159 aa12.32□□□□□ -0.44
CCDC50-202ENST00000392456 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
CCDC50-202ENST00000392456 VPS13DQ5THJ4 4388 aa12.32□□□□□ -0.44
CCDC50-202ENST00000392456 C15orf56Q8N910 161 aa12.31□□□□□ -0.44
CCDC50-202ENST00000392456 PRR15LQ9BU68 103 aa12.31□□□□□ -0.44
CCDC50-202ENST00000392456 KMT2AQ03164 3969 aa12.31□□□□□ -0.44
CCDC50-202ENST00000392456 Q75L30 129 aa12.31□□□□□ -0.44
CCDC50-202ENST00000392456 COX7BP24311 80 aa12.29□□□□□ -0.44
CCDC50-202ENST00000392456 NKAPP1Q8N9T2 125 aa12.27□□□□□ -0.45
CCDC50-202ENST00000392456 CDC42SE1Q9NRR8 79 aa12.27□□□□□ -0.45
CCDC50-202ENST00000392456 A6NED7 52 aa12.26□□□□□ -0.45
CCDC50-202ENST00000392456 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
CCDC50-202ENST00000392456 COX17Q14061 63 aa12.25□□□□□ -0.45
CCDC50-202ENST00000392456 MOBPQ13875 183 aa12.23□□□□□ -0.45
CCDC50-202ENST00000392456 C6orf48Q9UBA6 75 aa12.23□□□□□ -0.45
CCDC50-202ENST00000392456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.22□□□□□ -0.45
CCDC50-202ENST00000392456 Q8NDZ9 215 aa12.22□□□□□ -0.45
CCDC50-202ENST00000392456 LOC101927531A0A1B0GV80 90 aa12.21□□□□□ -0.45
CCDC50-202ENST00000392456 ELOF1P60002 83 aaKnown RBP12.21□□□□□ -0.45
CCDC50-202ENST00000392456 CAMK2N2Q96S95 79 aa12.2□□□□□ -0.46
CCDC50-202ENST00000392456 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
CCDC50-202ENST00000392456 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
CCDC50-202ENST00000392456 NDUFB1O75438 58 aa12.18□□□□□ -0.46
CCDC50-202ENST00000392456 NBDYA0A0U1RRE5 68 aa12.17□□□□□ -0.46
CCDC50-202ENST00000392456 ST20-AS1Q8NBB2 130 aa12.17□□□□□ -0.46
CCDC50-202ENST00000392456 DNAH2Q9P225 4427 aa12.17□□□□□ -0.46
CCDC50-202ENST00000392456 LINC00208Q96KT6 92 aa12.15□□□□□ -0.46
CCDC50-202ENST00000392456 Q9BRP9 147 aa12.15□□□□□ -0.46
CCDC50-202ENST00000392456 WWC2-AS2Q96NR7 200 aa12.13□□□□□ -0.47
CCDC50-202ENST00000392456 XAGE1AQ9HD64 81 aa12.13□□□□□ -0.47
CCDC50-202ENST00000392456 LINC01554Q52M75 96 aa12.12□□□□□ -0.47
CCDC50-202ENST00000392456 IGLV6-57P01721 117 aa12.11□□□□□ -0.47
CCDC50-202ENST00000392456 VPREB1P12018 145 aa12.1□□□□□ -0.47
CCDC50-202ENST00000392456 LINC00313P59037 77 aa12.1□□□□□ -0.47
CCDC50-202ENST00000392456 C3orf84H3BNL1 204 aa12.08□□□□□ -0.48
CCDC50-202ENST00000392456 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
CCDC50-202ENST00000392456 SPANXA2-OT1Q8N9U9 137 aa12.06□□□□□ -0.48
CCDC50-202ENST00000392456 PRAC1Q96KF2 57 aa12.06□□□□□ -0.48
CCDC50-202ENST00000392456 HYDINQ4G0P3 5121 aa12.06□□□□□ -0.48
CCDC50-202ENST00000392456 LY6G6CO95867 125 aa12.05□□□□□ -0.48
CCDC50-202ENST00000392456 Q6ZR54 194 aa12.02□□□□□ -0.48
CCDC50-202ENST00000392456 KCNQ1DNQ9H478 68 aa12□□□□□ -0.49
CCDC50-202ENST00000392456 LINC00476Q8WZB0 136 aa11.99□□□□□ -0.49
CCDC50-202ENST00000392456 HECTD4Q9Y4D8 3996 aa11.97□□□□□ -0.49
CCDC50-202ENST00000392456 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
CCDC50-202ENST00000392456 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.49
CCDC50-202ENST00000392456 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.49
CCDC50-202ENST00000392456 TLX1NBP0CAT3 122 aa11.95□□□□□ -0.5
CCDC50-202ENST00000392456 FAM168BA1KXE4 195 aa11.95□□□□□ -0.5
CCDC50-202ENST00000392456 MP68P56378 58 aa11.95□□□□□ -0.5
CCDC50-202ENST00000392456 DSCR10P59022 87 aa11.95□□□□□ -0.5
CCDC50-202ENST00000392456 DNAH6Q9C0G6 4158 aa11.95□□□□□ -0.5
CCDC50-202ENST00000392456 CNBPP62633 177 aaKnown RBP11.94□□□□□ -0.5
CCDC50-202ENST00000392456 DNAH17Q9UFH2 4485 aa11.93□□□□□ -0.5
CCDC50-202ENST00000392456 LINC01558Q9Y6Z2 57 aa11.93□□□□□ -0.5
CCDC50-202ENST00000392456 K7EQZ3 153 aa11.92□□□□□ -0.5
CCDC50-202ENST00000392456 ADM2Q7Z4H4 148 aa11.92□□□□□ -0.5
CCDC50-202ENST00000392456 KRTAP7-1Q8IUC3 87 aa11.92□□□□□ -0.5
CCDC50-202ENST00000392456 SPINK7P58062 85 aa11.92□□□□□ -0.5
CCDC50-202ENST00000392456 CASC2Q6XLA1 102 aa11.92□□□□□ -0.5
CCDC50-202ENST00000392456 COA5Q86WW8 74 aa11.92□□□□□ -0.5
CCDC50-202ENST00000392456 A0A1B0GW54 56 aa11.91□□□□□ -0.5
CCDC50-202ENST00000392456 PLA2G1BP04054 148 aaKnown RBP11.91□□□□□ -0.5
CCDC50-202ENST00000392456 FRAS1Q86XX4 4008 aa11.9□□□□□ -0.5
CCDC50-202ENST00000392456 A0A087WTM6 91 aa11.89□□□□□ -0.51
CCDC50-202ENST00000392456 SACSQ9NZJ4 4579 aa11.89□□□□□ -0.51
CCDC50-202ENST00000392456 C14orf177Q52M58 125 aa11.89□□□□□ -0.51
CCDC50-202ENST00000392456 A0A096LNI7 61 aa11.88□□□□□ -0.51
CCDC50-202ENST00000392456 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
CCDC50-202ENST00000392456 C1orf134Q5TEV5 83 aa11.88□□□□□ -0.51
CCDC50-202ENST00000392456 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
CCDC50-202ENST00000392456 LINC00528Q8N1L1 170 aa11.85□□□□□ -0.51
CCDC50-202ENST00000392456 C9orf163Q8N9P6 203 aa11.85□□□□□ -0.51
CCDC50-202ENST00000392456 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
CCDC50-202ENST00000392456 A0A1W2PNM2 257 aa11.84□□□□□ -0.51
CCDC50-202ENST00000392456 FAT2Q9NYQ8 4349 aa11.83□□□□□ -0.52
CCDC50-202ENST00000392456 C7orf33Q8WU49 177 aa11.83□□□□□ -0.52
CCDC50-202ENST00000392456 H3BPC8 53 aa11.83□□□□□ -0.52
CCDC50-202ENST00000392456 DNAH11Q96DT5 4516 aa11.82□□□□□ -0.52
CCDC50-202ENST00000392456 A0A1W2PNN7 141 aa11.82□□□□□ -0.52
CCDC50-202ENST00000392456 PANO1I0J062 215 aa11.82□□□□□ -0.52
CCDC50-202ENST00000392456 TNP2Q05952 138 aa11.82□□□□□ -0.52
CCDC50-202ENST00000392456 PLA2G2DQ9UNK4 145 aa11.81□□□□□ -0.52
CCDC50-202ENST00000392456 RPL37AP8A6NKH3 93 aa11.8□□□□□ -0.52
CCDC50-202ENST00000392456 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
CCDC50-202ENST00000392456 RTL8CO15255 209 aa11.79□□□□□ -0.52
CCDC50-202ENST00000392456 SPAG11AQ6PDA7 123 aa11.79□□□□□ -0.52
CCDC50-202ENST00000392456 H0Y9P7 68 aa11.78□□□□□ -0.52
CCDC50-202ENST00000392456 DNAH5Q8TE73 4624 aa11.77□□□□□ -0.52
CCDC50-202ENST00000392456 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.53
CCDC50-202ENST00000392456 IGLV5-37A0A075B6J1 123 aa11.77□□□□□ -0.53
CCDC50-202ENST00000392456 DEFB116Q30KQ4 102 aa11.76□□□□□ -0.53
CCDC50-202ENST00000392456 Q8N377 158 aa11.75□□□□□ -0.53
CCDC50-202ENST00000392456 Q8NBF4 154 aa11.75□□□□□ -0.53
CCDC50-202ENST00000392456 IGLV7-46A0A075B6I9 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms