RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 FUSP35637 526 aaKnown RBP eCLIP12.62□□□□□ -0.394e-7■■■■□ 25
CSNK1D-203ENST00000392334 DNAH6Q9C0G6 4158 aa12.62□□□□□ -0.39
CSNK1D-203ENST00000392334 ETDCA0A1B0GVM5 59 aa12.6□□□□□ -0.39
CSNK1D-203ENST00000392334 A0A1W2PNM2 257 aa12.59□□□□□ -0.39
CSNK1D-203ENST00000392334 CNBPP62633 177 aaKnown RBP12.59□□□□□ -0.39
CSNK1D-203ENST00000392334 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
CSNK1D-203ENST00000392334 IGKV2-24A0A0C4DH68 120 aa12.58□□□□□ -0.4
CSNK1D-203ENST00000392334 C1orf134Q5TEV5 83 aa12.58□□□□□ -0.4
CSNK1D-203ENST00000392334 A0A0U1RQV1 116 aa12.57□□□□□ -0.4
CSNK1D-203ENST00000392334 RPL37AP8A6NKH3 93 aa12.57□□□□□ -0.4
CSNK1D-203ENST00000392334 HRCT1Q6UXD1 115 aa12.57□□□□□ -0.4
CSNK1D-203ENST00000392334 C1orf137Q5JT78 98 aa12.57□□□□□ -0.4
CSNK1D-203ENST00000392334 KRTAP7-1Q8IUC3 87 aa12.57□□□□□ -0.4
CSNK1D-203ENST00000392334 Q8NBF4 154 aa12.57□□□□□ -0.4
CSNK1D-203ENST00000392334 LCE6AA0A183 80 aa12.56□□□□□ -0.4
CSNK1D-203ENST00000392334 SPRR4Q96PI1 79 aa12.56□□□□□ -0.4
CSNK1D-203ENST00000392334 A0A096LNI7 61 aa12.55□□□□□ -0.4
CSNK1D-203ENST00000392334 A0A087WTM6 91 aa12.55□□□□□ -0.4
CSNK1D-203ENST00000392334 SMIM26A0A096LP01 95 aa12.55□□□□□ -0.4
CSNK1D-203ENST00000392334 FRAS1Q86XX4 4008 aa12.54□□□□□ -0.4
CSNK1D-203ENST00000392334 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
CSNK1D-203ENST00000392334 MRPL55Q7Z7F7 128 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-203ENST00000392334 ST20-AS1Q8NBB2 130 aa12.52□□□□□ -0.4
CSNK1D-203ENST00000392334 CHTF8P0CG12 524 aa12.52□□□□□ -0.41
CSNK1D-203ENST00000392334 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
CSNK1D-203ENST00000392334 C16orf90A8MZG2 172 aa12.49□□□□□ -0.41
CSNK1D-203ENST00000392334 RTL8CO15255 209 aa12.49□□□□□ -0.41
CSNK1D-203ENST00000392334 FP248Q71RG6 208 aaPredicted RBP12.47□□□□□ -0.41
CSNK1D-203ENST00000392334 RYR2Q92736 4967 aa12.47□□□□□ -0.41
CSNK1D-203ENST00000392334 SMIM29Q86T20 159 aa12.47□□□□□ -0.41
CSNK1D-203ENST00000392334 FAT2Q9NYQ8 4349 aa12.46□□□□□ -0.41
CSNK1D-203ENST00000392334 A0A1W2PNN7 141 aa12.46□□□□□ -0.41
CSNK1D-203ENST00000392334 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
CSNK1D-203ENST00000392334 HECTD4Q9Y4D8 3996 aa12.46□□□□□ -0.42
CSNK1D-203ENST00000392334 UBE2BP63146 152 aa12.45□□□□□ -0.42
CSNK1D-203ENST00000392334 DSCR10P59022 87 aa12.45□□□□□ -0.42
CSNK1D-203ENST00000392334 PANO1I0J062 215 aa12.44□□□□□ -0.42
CSNK1D-203ENST00000392334 HIGD2AQ9BW72 106 aa12.43□□□□□ -0.42
CSNK1D-203ENST00000392334 FAM30AQ9NZY2 134 aa12.4□□□□□ -0.42
CSNK1D-203ENST00000392334 DNAH11Q96DT5 4516 aa12.39□□□□□ -0.43
CSNK1D-203ENST00000392334 RYR3Q15413 4870 aa12.38□□□□□ -0.43
CSNK1D-203ENST00000392334 IGLV8-61A0A075B6I0 122 aa12.37□□□□□ -0.43
CSNK1D-203ENST00000392334 IGLV5-52A0A0A0MRZ9 124 aa12.37□□□□□ -0.43
CSNK1D-203ENST00000392334 K7EQZ3 153 aa12.37□□□□□ -0.43
CSNK1D-203ENST00000392334 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-203ENST00000392334 PKD1P98161 4303 aa12.36□□□□□ -0.43
CSNK1D-203ENST00000392334 PHF5AQ7RTV0 110 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-203ENST00000392334 ZCCHC13Q8WW36 166 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-203ENST00000392334 LINC00474Q9P2X8 69 aa12.35□□□□□ -0.43
CSNK1D-203ENST00000392334 IGFL1Q6UW32 110 aa12.34□□□□□ -0.43
CSNK1D-203ENST00000392334 KRTAP10-2P60368 255 aa12.33□□□□□ -0.44
CSNK1D-203ENST00000392334 HCG22E2RYF7 251 aa12.32□□□□□ -0.44
CSNK1D-203ENST00000392334 DNAH5Q8TE73 4624 aa12.31□□□□□ -0.44
CSNK1D-203ENST00000392334 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
CSNK1D-203ENST00000392334 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
CSNK1D-203ENST00000392334 FAM229BQ4G0N7 80 aa12.3□□□□□ -0.44
CSNK1D-203ENST00000392334 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
CSNK1D-203ENST00000392334 PKIGQ9Y2B9 76 aa12.3□□□□□ -0.44
CSNK1D-203ENST00000392334 PRO0628Q9UI54 55 aa12.29□□□□□ -0.44
CSNK1D-203ENST00000392334 PRLHP81277 87 aa12.27□□□□□ -0.45
CSNK1D-203ENST00000392334 PKHD1P08F94 4074 aa12.26□□□□□ -0.45
CSNK1D-203ENST00000392334 hDV103S1A0JD37 113 aa12.23□□□□□ -0.45
CSNK1D-203ENST00000392334 SPRR1BP22528 89 aa12.23□□□□□ -0.45
CSNK1D-203ENST00000392334 A0A0G2JQZ4 141 aa12.23□□□□□ -0.45
CSNK1D-203ENST00000392334 H0Y9J4 135 aa12.23□□□□□ -0.45
CSNK1D-203ENST00000392334 A0A087WSZ3 146 aa12.21□□□□□ -0.45
CSNK1D-203ENST00000392334 UBE2AP49459 152 aa12.2□□□□□ -0.46
CSNK1D-203ENST00000392334 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
CSNK1D-203ENST00000392334 CYP4F30PQ9H0H9 118 aa12.19□□□□□ -0.46
CSNK1D-203ENST00000392334 KRTAP29-1A8MX34 341 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-203ENST00000392334 NDUFB1O75438 58 aa12.16□□□□□ -0.46
CSNK1D-203ENST00000392334 MPLKIPQ8TAP9 179 aa12.16□□□□□ -0.46
CSNK1D-203ENST00000392334 A0A1B0GVY2 172 aa12.16□□□□□ -0.46
CSNK1D-203ENST00000392334 DEFB116Q30KQ4 102 aa12.15□□□□□ -0.46
CSNK1D-203ENST00000392334 C1orf64Q8NEQ6 169 aa12.15□□□□□ -0.46
CSNK1D-203ENST00000392334 KRTAP10-1P60331 282 aa12.14□□□□□ -0.47
CSNK1D-203ENST00000392334 WFDC13Q8IUB5 93 aa12.14□□□□□ -0.47
CSNK1D-203ENST00000392334 PLAC8Q9NZF1 115 aa12.14□□□□□ -0.47
CSNK1D-203ENST00000392334 MP68P56378 58 aa12.13□□□□□ -0.47
CSNK1D-203ENST00000392334 SRRM2Q9UQ35 2752 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-203ENST00000392334 PRR15Q8IV56 129 aa12.11□□□□□ -0.47
CSNK1D-203ENST00000392334 LINC00472Q9H8W2 130 aa12.1□□□□□ -0.47
CSNK1D-203ENST00000392334 H3BPC8 53 aa12.1□□□□□ -0.47
CSNK1D-203ENST00000392334 RPL37AP61513 92 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-203ENST00000392334 Q1T7F1 81 aa12.1□□□□□ -0.47
CSNK1D-203ENST00000392334 CIRBP-AS1Q8TBR5 109 aa12.1□□□□□ -0.47
CSNK1D-203ENST00000392334 LRP1BQ9NZR2 4599 aa12.09□□□□□ -0.47
CSNK1D-203ENST00000392334 TRAV22A0A0B4J277 110 aa12.09□□□□□ -0.47
CSNK1D-203ENST00000392334 A8MWP4 228 aa12.08□□□□□ -0.48
CSNK1D-203ENST00000392334 CASC2Q6XLA1 102 aa12.07□□□□□ -0.48
CSNK1D-203ENST00000392334 PSORS1C2Q9UIG4 136 aa12.07□□□□□ -0.48
CSNK1D-203ENST00000392334 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-203ENST00000392334 BRK1Q8WUW1 75 aa12.05□□□□□ -0.48
CSNK1D-203ENST00000392334 Q6ZSA8 131 aa12.03□□□□□ -0.48
CSNK1D-203ENST00000392334 KRTAP13-1Q8IUC0 172 aa12.03□□□□□ -0.48
CSNK1D-203ENST00000392334 SPANXA2-OT1Q8N9U9 137 aa12.03□□□□□ -0.48
CSNK1D-203ENST00000392334 LINC00208Q96KT6 92 aa12.03□□□□□ -0.48
CSNK1D-203ENST00000392334 H0Y9P7 68 aa12.01□□□□□ -0.49
CSNK1D-203ENST00000392334 PRR4Q16378 134 aa11.96□□□□□ -0.49
CSNK1D-203ENST00000392334 MMP24-AS1A0A0U1RRL7 71 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms