RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 LINC00474Q9P2X8 69 aa12.24□□□□□ -0.45
SSU72-204ENST00000378726 PRO0628Q9UI54 55 aa12.24□□□□□ -0.45
SSU72-204ENST00000378726 REG3GQ6UW15 175 aa12.23□□□□□ -0.45
SSU72-204ENST00000378726 Q6ZRX8 168 aa12.23□□□□□ -0.45
SSU72-204ENST00000378726 FUSP35637 526 aaKnown RBP eCLIP12.23□□□□□ -0.45
SSU72-204ENST00000378726 ATP5EP56381 51 aaPredicted RBP12.22□□□□□ -0.45
SSU72-204ENST00000378726 PANO1I0J062 215 aa12.21□□□□□ -0.45
SSU72-204ENST00000378726 LINC00336Q6ZUF6 198 aa12.21□□□□□ -0.45
SSU72-204ENST00000378726 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
SSU72-204ENST00000378726 Q8N377 158 aa12.21□□□□□ -0.45
SSU72-204ENST00000378726 DHRS4-AS1Q9P1J3 65 aa12.21□□□□□ -0.45
SSU72-204ENST00000378726 BPY2O14599 106 aa12.21□□□□□ -0.46
SSU72-204ENST00000378726 IGKV4-1P06312 121 aa12.21□□□□□ -0.46
SSU72-204ENST00000378726 Q9BRP9 147 aa12.21□□□□□ -0.46
SSU72-204ENST00000378726 NREPQ16612 68 aa12.2□□□□□ -0.46
SSU72-204ENST00000378726 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
SSU72-204ENST00000378726 RTL8CO15255 209 aa12.19□□□□□ -0.46
SSU72-204ENST00000378726 HECTD4Q9Y4D8 3996 aa12.19□□□□□ -0.46
SSU72-204ENST00000378726 ERC2-IT1O76042 136 aa12.17□□□□□ -0.46
SSU72-204ENST00000378726 DNAH6Q9C0G6 4158 aa12.17□□□□□ -0.46
SSU72-204ENST00000378726 DNAH17Q9UFH2 4485 aa12.17□□□□□ -0.46
SSU72-204ENST00000378726 UBE2BP63146 152 aa12.17□□□□□ -0.46
SSU72-204ENST00000378726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
SSU72-204ENST00000378726 TNP2Q05952 138 aa12.15□□□□□ -0.46
SSU72-204ENST00000378726 KRTAP11-1Q8IUC1 163 aa12.15□□□□□ -0.46
SSU72-204ENST00000378726 TMEM254Q8TBM7 123 aa12.15□□□□□ -0.46
SSU72-204ENST00000378726 SPACA4Q8TDM5 124 aa12.15□□□□□ -0.46
SSU72-204ENST00000378726 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
SSU72-204ENST00000378726 IGLV5-48A0A075B6I7 105 aa12.14□□□□□ -0.47
SSU72-204ENST00000378726 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
SSU72-204ENST00000378726 ST20-AS1Q8NBB2 130 aa12.1□□□□□ -0.47
SSU72-204ENST00000378726 PRLHP81277 87 aa12.1□□□□□ -0.47
SSU72-204ENST00000378726 OCR1Q9BZK8 76 aa12.1□□□□□ -0.47
SSU72-204ENST00000378726 A0A1W2PNM2 257 aa12.09□□□□□ -0.47
SSU72-204ENST00000378726 HYDINQ4G0P3 5121 aa12.07□□□□□ -0.48
SSU72-204ENST00000378726 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
SSU72-204ENST00000378726 A0A0U1RQV1 116 aa12.04□□□□□ -0.48
SSU72-204ENST00000378726 C1orf137Q5JT78 98 aa12.04□□□□□ -0.48
SSU72-204ENST00000378726 FRAS1Q86XX4 4008 aa12.04□□□□□ -0.48
SSU72-204ENST00000378726 H0Y9J4 135 aa12.02□□□□□ -0.49
SSU72-204ENST00000378726 KRTAP10-2P60368 255 aa12.02□□□□□ -0.49
SSU72-204ENST00000378726 PLAC8Q9NZF1 115 aa12.01□□□□□ -0.49
SSU72-204ENST00000378726 DNAH11Q96DT5 4516 aa12.01□□□□□ -0.49
SSU72-204ENST00000378726 UBE2AP49459 152 aa12□□□□□ -0.49
SSU72-204ENST00000378726 SMIM29Q86T20 159 aa12□□□□□ -0.49
SSU72-204ENST00000378726 Q8NBF4 154 aa12□□□□□ -0.49
SSU72-204ENST00000378726 FAM30AQ9NZY2 134 aa11.99□□□□□ -0.49
SSU72-204ENST00000378726 A0A1B0GW54 56 aa11.98□□□□□ -0.49
SSU72-204ENST00000378726 DNAH5Q8TE73 4624 aa11.98□□□□□ -0.49
SSU72-204ENST00000378726 FAM229BQ4G0N7 80 aa11.98□□□□□ -0.49
SSU72-204ENST00000378726 BRK1Q8WUW1 75 aa11.96□□□□□ -0.49
SSU72-204ENST00000378726 SPRR4Q96PI1 79 aa11.96□□□□□ -0.49
SSU72-204ENST00000378726 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
SSU72-204ENST00000378726 FAT2Q9NYQ8 4349 aa11.95□□□□□ -0.5
SSU72-204ENST00000378726 MPLKIPQ8TAP9 179 aa11.95□□□□□ -0.5
SSU72-204ENST00000378726 DSCR10P59022 87 aa11.94□□□□□ -0.5
SSU72-204ENST00000378726 SACSQ9NZJ4 4579 aa11.94□□□□□ -0.5
SSU72-204ENST00000378726 KRTAP13-1Q8IUC0 172 aa11.93□□□□□ -0.5
SSU72-204ENST00000378726 SRRM2Q9UQ35 2752 aaKnown RBP11.92□□□□□ -0.5
SSU72-204ENST00000378726 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
SSU72-204ENST00000378726 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
SSU72-204ENST00000378726 K7EQZ3 153 aa11.91□□□□□ -0.5
SSU72-204ENST00000378726 PKD1P98161 4303 aa11.9□□□□□ -0.5
SSU72-204ENST00000378726 LCE6AA0A183 80 aa11.88□□□□□ -0.51
SSU72-204ENST00000378726 CIRBP-AS1Q8TBR5 109 aa11.86□□□□□ -0.51
SSU72-204ENST00000378726 SPRR1BP22528 89 aa11.86□□□□□ -0.51
SSU72-204ENST00000378726 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
SSU72-204ENST00000378726 IGFL1Q6UW32 110 aa11.84□□□□□ -0.51
SSU72-204ENST00000378726 hDV103S1A0JD37 113 aa11.82□□□□□ -0.52
SSU72-204ENST00000378726 DEFB116Q30KQ4 102 aa11.82□□□□□ -0.52
SSU72-204ENST00000378726 C1orf195Q5TG92 126 aa11.82□□□□□ -0.52
SSU72-204ENST00000378726 Q6ZSA8 131 aa11.81□□□□□ -0.52
SSU72-204ENST00000378726 ZNF861PO60384 105 aa11.8□□□□□ -0.52
SSU72-204ENST00000378726 IGLV8-61A0A075B6I0 122 aa11.8□□□□□ -0.52
SSU72-204ENST00000378726 ZCCHC13Q8WW36 166 aaKnown RBP11.8□□□□□ -0.52
SSU72-204ENST00000378726 HCG22E2RYF7 251 aa11.79□□□□□ -0.52
SSU72-204ENST00000378726 A0A087WSZ3 146 aa11.75□□□□□ -0.53
SSU72-204ENST00000378726 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
SSU72-204ENST00000378726 Q1T7F1 81 aa11.75□□□□□ -0.53
SSU72-204ENST00000378726 C1orf64Q8NEQ6 169 aa11.75□□□□□ -0.53
SSU72-204ENST00000378726 ZNF706Q9Y5V0 76 aaPredicted RBP11.73□□□□□ -0.53
SSU72-204ENST00000378726 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
SSU72-204ENST00000378726 LRP1BQ9NZR2 4599 aa11.72□□□□□ -0.53
SSU72-204ENST00000378726 V9GYY9 64 aa11.72□□□□□ -0.53
SSU72-204ENST00000378726 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
SSU72-204ENST00000378726 LINC00483Q53H64 154 aa11.71□□□□□ -0.53
SSU72-204ENST00000378726 PRR15Q8IV56 129 aa11.68□□□□□ -0.54
SSU72-204ENST00000378726 IGLV9-49A0A0B4J1Y8 123 aa11.67□□□□□ -0.54
SSU72-204ENST00000378726 CYP4F30PQ9H0H9 118 aa11.67□□□□□ -0.54
SSU72-204ENST00000378726 ANAPC11Q9NYG5 84 aa11.67□□□□□ -0.54
SSU72-204ENST00000378726 PRR4Q16378 134 aa11.66□□□□□ -0.54
SSU72-204ENST00000378726 KMT2CQ8NEZ4 4911 aaKnown RBP11.65□□□□□ -0.54
SSU72-204ENST00000378726 RYR2Q92736 4967 aa11.65□□□□□ -0.54
SSU72-204ENST00000378726 PKHD1P08F94 4074 aa11.65□□□□□ -0.54
SSU72-204ENST00000378726 NDUFB1O75438 58 aa11.63□□□□□ -0.55
SSU72-204ENST00000378726 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
SSU72-204ENST00000378726 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
SSU72-204ENST00000378726 TRAV22A0A0B4J277 110 aa11.6□□□□□ -0.55
SSU72-204ENST00000378726 MP68P56378 58 aa11.59□□□□□ -0.55
SSU72-204ENST00000378726 DYNC1H1Q14204 4646 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms