RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 K7EQZ3 153 aa7.33□□□□□ -1.24
TNFRSF9-201ENST00000377507 B9D2Q9BPU9 175 aa7.33□□□□□ -1.24
TNFRSF9-201ENST00000377507 LYSTQ99698 3801 aa7.32□□□□□ -1.24
TNFRSF9-201ENST00000377507 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
TNFRSF9-201ENST00000377507 HIGD2AQ9BW72 106 aa7.32□□□□□ -1.24
TNFRSF9-201ENST00000377507 A0A0G2JQZ4 141 aa7.31□□□□□ -1.24
TNFRSF9-201ENST00000377507 CHTF8P0CG12 524 aa7.31□□□□□ -1.24
TNFRSF9-201ENST00000377507 PKIGQ9Y2B9 76 aa7.31□□□□□ -1.24
TNFRSF9-201ENST00000377507 NBDYA0A0U1RRE5 68 aa7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 Q6ZRN7 208 aaPredicted RBP7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 FAM30AQ9NZY2 134 aa7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 MGAM2Q2M2H8 2515 aa7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 UBE2AP49459 152 aa7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
TNFRSF9-201ENST00000377507 COL7A1Q02388 2944 aa7.28□□□□□ -1.24
TNFRSF9-201ENST00000377507 HCG22E2RYF7 251 aa7.28□□□□□ -1.24
TNFRSF9-201ENST00000377507 C4orf26Q17RF5 130 aa7.28□□□□□ -1.24
TNFRSF9-201ENST00000377507 C5orf47Q569G3 176 aa7.28□□□□□ -1.24
TNFRSF9-201ENST00000377507 A0A087WSZ3 146 aa7.27□□□□□ -1.25
TNFRSF9-201ENST00000377507 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
TNFRSF9-201ENST00000377507 SMIM26A0A096LP01 95 aa7.26□□□□□ -1.25
TNFRSF9-201ENST00000377507 KRTAP13-1Q8IUC0 172 aa7.26□□□□□ -1.25
TNFRSF9-201ENST00000377507 NUPR2A6NF83 97 aa7.25□□□□□ -1.25
TNFRSF9-201ENST00000377507 MDFIQ99750 246 aa7.25□□□□□ -1.25
TNFRSF9-201ENST00000377507 PANO1I0J062 215 aa7.24□□□□□ -1.25
TNFRSF9-201ENST00000377507 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
TNFRSF9-201ENST00000377507 DNAH7Q8WXX0 4024 aa7.24□□□□□ -1.25
TNFRSF9-201ENST00000377507 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
TNFRSF9-201ENST00000377507 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
TNFRSF9-201ENST00000377507 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
TNFRSF9-201ENST00000377507 KRTAP29-1A8MX34 341 aaPredicted RBP7.22□□□□□ -1.25
TNFRSF9-201ENST00000377507 PLECQ15149 4684 aaKnown RBP7.22□□□□□ -1.25
TNFRSF9-201ENST00000377507 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.25
TNFRSF9-201ENST00000377507 SPACA4Q8TDM5 124 aa7.21□□□□□ -1.26
TNFRSF9-201ENST00000377507 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
TNFRSF9-201ENST00000377507 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
TNFRSF9-201ENST00000377507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
TNFRSF9-201ENST00000377507 A8MWP4 228 aa7.18□□□□□ -1.26
TNFRSF9-201ENST00000377507 WFDC13Q8IUB5 93 aa7.17□□□□□ -1.26
TNFRSF9-201ENST00000377507 A0A087WTM6 91 aa7.16□□□□□ -1.26
TNFRSF9-201ENST00000377507 LINC00483Q53H64 154 aa7.16□□□□□ -1.26
TNFRSF9-201ENST00000377507 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
TNFRSF9-201ENST00000377507 CASC2Q6XLA1 102 aa7.15□□□□□ -1.27
TNFRSF9-201ENST00000377507 VPS13DQ5THJ4 4388 aa7.14□□□□□ -1.27
TNFRSF9-201ENST00000377507 hDV103S1A0JD37 113 aa7.13□□□□□ -1.27
TNFRSF9-201ENST00000377507 NDUFB1O75438 58 aa7.13□□□□□ -1.27
TNFRSF9-201ENST00000377507 TENM2Q9NT68 2774 aa7.13□□□□□ -1.27
TNFRSF9-201ENST00000377507 SRRM2Q9UQ35 2752 aaKnown RBP7.13□□□□□ -1.27
TNFRSF9-201ENST00000377507 MP68P56378 58 aa7.13□□□□□ -1.27
TNFRSF9-201ENST00000377507 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
TNFRSF9-201ENST00000377507 Q6ZR54 194 aa7.12□□□□□ -1.27
TNFRSF9-201ENST00000377507 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
TNFRSF9-201ENST00000377507 H3BPC8 53 aa7.11□□□□□ -1.27
TNFRSF9-201ENST00000377507 Q96NJ1 140 aa7.11□□□□□ -1.27
TNFRSF9-201ENST00000377507 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
TNFRSF9-201ENST00000377507 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
TNFRSF9-201ENST00000377507 IGLV5-52A0A0A0MRZ9 124 aa7.09□□□□□ -1.27
TNFRSF9-201ENST00000377507 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
TNFRSF9-201ENST00000377507 RTL8CO15255 209 aa7.09□□□□□ -1.27
TNFRSF9-201ENST00000377507 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
TNFRSF9-201ENST00000377507 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
TNFRSF9-201ENST00000377507 ZNF706Q9Y5V0 76 aaPredicted RBP7.09□□□□□ -1.27
TNFRSF9-201ENST00000377507 IGLV9-49A0A0B4J1Y8 123 aa7.08□□□□□ -1.28
TNFRSF9-201ENST00000377507 LINC00336Q6ZUF6 198 aa7.08□□□□□ -1.28
TNFRSF9-201ENST00000377507 LINC00208Q96KT6 92 aa7.08□□□□□ -1.28
TNFRSF9-201ENST00000377507 WWC2-AS2Q96NR7 200 aa7.08□□□□□ -1.28
TNFRSF9-201ENST00000377507 PSORS1C2Q9UIG4 136 aa7.08□□□□□ -1.28
TNFRSF9-201ENST00000377507 PRKDCP78527 4128 aaKnown RBP7.08□□□□□ -1.28
TNFRSF9-201ENST00000377507 H0Y9P7 68 aa7.07□□□□□ -1.28
TNFRSF9-201ENST00000377507 ZNF861PO60384 105 aa7.06□□□□□ -1.28
TNFRSF9-201ENST00000377507 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
TNFRSF9-201ENST00000377507 MOBPQ13875 183 aa7.05□□□□□ -1.28
TNFRSF9-201ENST00000377507 HECTD4Q9Y4D8 3996 aa7.05□□□□□ -1.28
TNFRSF9-201ENST00000377507 DNHD1Q96M86 4753 aa7.04□□□□□ -1.28
TNFRSF9-201ENST00000377507 MPLKIPQ8TAP9 179 aa7.04□□□□□ -1.28
TNFRSF9-201ENST00000377507 Q1T7F1 81 aa7.03□□□□□ -1.28
TNFRSF9-201ENST00000377507 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
TNFRSF9-201ENST00000377507 PRO0628Q9UI54 55 aa7.02□□□□□ -1.29
TNFRSF9-201ENST00000377507 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
TNFRSF9-201ENST00000377507 DNAH2Q9P225 4427 aa7.01□□□□□ -1.29
TNFRSF9-201ENST00000377507 KMT2AQ03164 3969 aa7.01□□□□□ -1.29
TNFRSF9-201ENST00000377507 PRR4Q16378 134 aa7.01□□□□□ -1.29
TNFRSF9-201ENST00000377507 C8orf17Q9NRJ1 99 aa7.01□□□□□ -1.29
TNFRSF9-201ENST00000377507 KRTAP21-3Q3LHN1 58 aa7□□□□□ -1.29
TNFRSF9-201ENST00000377507 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
TNFRSF9-201ENST00000377507 C1orf134Q5TEV5 83 aa6.99□□□□□ -1.29
TNFRSF9-201ENST00000377507 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
TNFRSF9-201ENST00000377507 ANAPC11Q9NYG5 84 aa6.98□□□□□ -1.29
TNFRSF9-201ENST00000377507 IGLV7-43P04211 117 aa6.97□□□□□ -1.29
TNFRSF9-201ENST00000377507 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.3
TNFRSF9-201ENST00000377507 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
TNFRSF9-201ENST00000377507 IGHV6-1A0A0B4J1U7 121 aa6.95□□□□□ -1.3
TNFRSF9-201ENST00000377507 CDK2AP2O75956 126 aa6.93□□□□□ -1.3
TNFRSF9-201ENST00000377507 CD164Q04900 197 aa6.93□□□□□ -1.3
TNFRSF9-201ENST00000377507 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
TNFRSF9-201ENST00000377507 FBN3Q75N90 2809 aa6.92□□□□□ -1.3
TNFRSF9-201ENST00000377507 A0A087X002 238 aa6.91□□□□□ -1.3
TNFRSF9-201ENST00000377507 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
TNFRSF9-201ENST00000377507 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms