RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 KLK12Q9UKR0 248 aa5.71□□□□□ -1.5
UBR4-201ENST00000375218 LENEPQ9Y5L5 61 aa5.7□□□□□ -1.5
UBR4-201ENST00000375218 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
UBR4-201ENST00000375218 Q8N377 158 aa5.7□□□□□ -1.5
UBR4-201ENST00000375218 COX6B1P14854 86 aa5.69□□□□□ -1.5
UBR4-201ENST00000375218 COX7B2Q8TF08 81 aa5.69□□□□□ -1.5
UBR4-201ENST00000375218 TGP01266 2768 aa5.68□□□□□ -1.5
UBR4-201ENST00000375218 COL6A5A8TX70 2615 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 WFDC10AQ9H1F0 79 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 NOTCH1P46531 2555 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 DEFB136Q30KP8 78 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
UBR4-201ENST00000375218 GIG44P09565 113 aaPredicted RBP5.66□□□□□ -1.5
UBR4-201ENST00000375218 RYR3Q15413 4870 aa5.66□□□□□ -1.5
UBR4-201ENST00000375218 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
UBR4-201ENST00000375218 IGHV3-53P01767 116 aa5.66□□□□□ -1.5
UBR4-201ENST00000375218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.65□□□□□ -1.5
UBR4-201ENST00000375218 C9orf129Q5T035 196 aaKnown RBP5.65□□□□□ -1.5
UBR4-201ENST00000375218 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.51
UBR4-201ENST00000375218 F8P00451 2351 aa5.65□□□□□ -1.51
UBR4-201ENST00000375218 PANO1I0J062 215 aa5.64□□□□□ -1.51
UBR4-201ENST00000375218 NCR3O14931 201 aa5.64□□□□□ -1.51
UBR4-201ENST00000375218 NDUFB1O75438 58 aa5.64□□□□□ -1.51
UBR4-201ENST00000375218 C9orf163Q8N9P6 203 aa5.64□□□□□ -1.51
UBR4-201ENST00000375218 HIVEP2P31629 2446 aa5.64□□□□□ -1.51
UBR4-201ENST00000375218 DEFB116Q30KQ4 102 aa5.63□□□□□ -1.51
UBR4-201ENST00000375218 TYMSOSQ8TAI1 123 aa5.63□□□□□ -1.51
UBR4-201ENST00000375218 USMG5Q96IX5 58 aa5.63□□□□□ -1.51
UBR4-201ENST00000375218 IGHV3-64A0A075B6Q5 118 aa5.62□□□□□ -1.51
UBR4-201ENST00000375218 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
UBR4-201ENST00000375218 LINC00315P59091 139 aa5.61□□□□□ -1.51
UBR4-201ENST00000375218 SPINK13Q1W4C9 94 aa5.61□□□□□ -1.51
UBR4-201ENST00000375218 A0A087WYN8 130 aa5.61□□□□□ -1.51
UBR4-201ENST00000375218 NUPR2A6NF83 97 aa5.61□□□□□ -1.51
UBR4-201ENST00000375218 H0Y9P7 68 aa5.6□□□□□ -1.51
UBR4-201ENST00000375218 NDUFA4O00483 81 aa5.6□□□□□ -1.51
UBR4-201ENST00000375218 A0A087WSZ3 146 aa5.6□□□□□ -1.51
UBR4-201ENST00000375218 IGKV3OR2-268A0A0C4DH90 116 aa5.6□□□□□ -1.51
UBR4-201ENST00000375218 TRBV6-1A0A0K0K1D8 114 aa5.59□□□□□ -1.51
UBR4-201ENST00000375218 IGIPA6NJ69 53 aa5.59□□□□□ -1.51
UBR4-201ENST00000375218 Q9BRP9 147 aa5.59□□□□□ -1.51
UBR4-201ENST00000375218 SMIM2Q9BVW6 85 aa5.59□□□□□ -1.51
UBR4-201ENST00000375218 A8MTW9 85 aa5.58□□□□□ -1.52
UBR4-201ENST00000375218 RPL39LQ96EH5 51 aaKnown RBP5.58□□□□□ -1.52
UBR4-201ENST00000375218 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
UBR4-201ENST00000375218 DEFB131AP59861 70 aa5.58□□□□□ -1.52
UBR4-201ENST00000375218 IGLV7-43P04211 117 aa5.58□□□□□ -1.52
UBR4-201ENST00000375218 JMJD7-PLA2G4BH0Y9G9 81 aa5.58□□□□□ -1.52
UBR4-201ENST00000375218 C9orf47Q6ZRZ4 202 aa5.58□□□□□ -1.52
UBR4-201ENST00000375218 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
UBR4-201ENST00000375218 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
UBR4-201ENST00000375218 CCL18P55774 89 aa5.56□□□□□ -1.52
UBR4-201ENST00000375218 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
UBR4-201ENST00000375218 KPRPQ5T749 579 aaPredicted RBP5.56□□□□□ -1.52
UBR4-201ENST00000375218 KRTAP26-1Q6PEX3 210 aa5.55□□□□□ -1.52
UBR4-201ENST00000375218 LITAFQ99732 161 aa5.55□□□□□ -1.52
UBR4-201ENST00000375218 OBSCN-AS1Q96MR7 158 aa5.54□□□□□ -1.52
UBR4-201ENST00000375218 TRGV2A0A075B6R0 118 aa5.53□□□□□ -1.52
UBR4-201ENST00000375218 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
UBR4-201ENST00000375218 TRGV1A0A0A0MS02 117 aa5.53□□□□□ -1.52
UBR4-201ENST00000375218 LINC01546A6NGU7 62 aa5.53□□□□□ -1.52
UBR4-201ENST00000375218 STAB2Q8WWQ8 2551 aa5.52□□□□□ -1.53
UBR4-201ENST00000375218 H3BUA1 57 aa5.52□□□□□ -1.53
UBR4-201ENST00000375218 RPL39P62891 51 aaKnown RBP5.52□□□□□ -1.53
UBR4-201ENST00000375218 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
UBR4-201ENST00000375218 TRGV4A0A0C4DH28 118 aa5.51□□□□□ -1.53
UBR4-201ENST00000375218 Q6ZTI0 123 aa5.51□□□□□ -1.53
UBR4-201ENST00000375218 LRP1BQ9NZR2 4599 aa5.5□□□□□ -1.53
UBR4-201ENST00000375218 UQCR11O14957 56 aa5.5□□□□□ -1.53
UBR4-201ENST00000375218 COA5Q86WW8 74 aa5.5□□□□□ -1.53
UBR4-201ENST00000375218 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
UBR4-201ENST00000375218 Q5W150 140 aa5.49□□□□□ -1.53
UBR4-201ENST00000375218 RYR2Q92736 4967 aa5.49□□□□□ -1.53
UBR4-201ENST00000375218 DEFB114Q30KQ6 69 aa5.47□□□□□ -1.53
UBR4-201ENST00000375218 C4orf3Q8WVX3 66 aa5.47□□□□□ -1.53
UBR4-201ENST00000375218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.46□□□□□ -1.53
UBR4-201ENST00000375218 IGKV2-29A2NJV5 120 aaPredicted RBP5.46□□□□□ -1.53
UBR4-201ENST00000375218 LCE2AQ5TA79 106 aaPredicted RBP5.46□□□□□ -1.53
UBR4-201ENST00000375218 AMELXQ99217 191 aa5.46□□□□□ -1.54
UBR4-201ENST00000375218 HTN3P15516 51 aa5.45□□□□□ -1.54
UBR4-201ENST00000375218 KRTAP10-11P60412 298 aa5.45□□□□□ -1.54
UBR4-201ENST00000375218 DEFB130BP0DP73 79 aa5.45□□□□□ -1.54
UBR4-201ENST00000375218 DEFB130AP0DP74 79 aa5.45□□□□□ -1.54
UBR4-201ENST00000375218 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
UBR4-201ENST00000375218 H0YGX0 51 aa5.44□□□□□ -1.54
UBR4-201ENST00000375218 A0A1B0GU33 70 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 SPANXA2-OT1Q8N9U9 137 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 ZNF861PO60384 105 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 KRTAP21-3Q3LHN1 58 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 A0A1B0GU69 56 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 SLPIP03973 132 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 PDE6GP18545 87 aa5.43□□□□□ -1.54
UBR4-201ENST00000375218 NOP10Q9NPE3 64 aaKnown RBP5.42□□□□□ -1.54
UBR4-201ENST00000375218 MGAM2Q2M2H8 2515 aa5.42□□□□□ -1.54
UBR4-201ENST00000375218 LINC00158P58513 81 aa5.42□□□□□ -1.54
UBR4-201ENST00000375218 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms