RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 H0Y9J4 135 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 OXTP01178 125 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
PFDN4-201ENST00000371419 OBSCN-AS1Q96MR7 158 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 KRTAP13-1Q8IUC0 172 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 SIGMAR1Q99720 223 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
PFDN4-201ENST00000371419 FAT3Q8TDW7 4589 aa9.65□□□□□ -0.86
PFDN4-201ENST00000371419 SPRR1AP35321 89 aa9.64□□□□□ -0.87
PFDN4-201ENST00000371419 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
PFDN4-201ENST00000371419 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
PFDN4-201ENST00000371419 PRLHP81277 87 aa9.63□□□□□ -0.87
PFDN4-201ENST00000371419 Q6ZQY7 126 aa9.62□□□□□ -0.87
PFDN4-201ENST00000371419 ETDCA0A1B0GVM5 59 aa9.61□□□□□ -0.87
PFDN4-201ENST00000371419 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
PFDN4-201ENST00000371419 C14orf132Q9NPU4 83 aa9.59□□□□□ -0.87
PFDN4-201ENST00000371419 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
PFDN4-201ENST00000371419 B5MCH6 92 aa9.57□□□□□ -0.88
PFDN4-201ENST00000371419 GAGE2AQ6NT46 116 aa9.57□□□□□ -0.88
PFDN4-201ENST00000371419 Q6ZRX8 168 aa9.57□□□□□ -0.88
PFDN4-201ENST00000371419 HIGD2AQ9BW72 106 aa9.57□□□□□ -0.88
PFDN4-201ENST00000371419 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
PFDN4-201ENST00000371419 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
PFDN4-201ENST00000371419 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
PFDN4-201ENST00000371419 CCKP06307 115 aa9.54□□□□□ -0.88
PFDN4-201ENST00000371419 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
PFDN4-201ENST00000371419 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
PFDN4-201ENST00000371419 C21orf62-AS1Q17RA5 79 aa9.53□□□□□ -0.88
PFDN4-201ENST00000371419 PDE6GP18545 87 aa9.53□□□□□ -0.88
PFDN4-201ENST00000371419 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
PFDN4-201ENST00000371419 LOC110117498A0A087WWA1 95 aa9.51□□□□□ -0.89
PFDN4-201ENST00000371419 MT-ATP8P03928 68 aa9.51□□□□□ -0.89
PFDN4-201ENST00000371419 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
PFDN4-201ENST00000371419 TNXBP22105 4242 aa9.51□□□□□ -0.89
PFDN4-201ENST00000371419 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
PFDN4-201ENST00000371419 PRR26Q8N8Z3 221 aa9.5□□□□□ -0.89
PFDN4-201ENST00000371419 DSCR8Q96T75 97 aa9.5□□□□□ -0.89
PFDN4-201ENST00000371419 Q9BRP9 147 aa9.5□□□□□ -0.89
PFDN4-201ENST00000371419 A0A1B0GV72 72 aa9.49□□□□□ -0.89
PFDN4-201ENST00000371419 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
PFDN4-201ENST00000371419 ZNF706Q9Y5V0 76 aaPredicted RBP9.49□□□□□ -0.89
PFDN4-201ENST00000371419 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 ANAPC11Q9NYG5 84 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 ERC2-IT1O76042 136 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 CRYGAP11844 174 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 PCP4P48539 62 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 FAM229BQ4G0N7 80 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 Q6ZQT0 140 aa9.47□□□□□ -0.89
PFDN4-201ENST00000371419 IGLV5-48A0A075B6I7 105 aa9.46□□□□□ -0.9
PFDN4-201ENST00000371419 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
PFDN4-201ENST00000371419 A0A087X002 238 aa9.45□□□□□ -0.9
PFDN4-201ENST00000371419 Q6Q795 121 aa9.45□□□□□ -0.9
PFDN4-201ENST00000371419 HERC1Q15751 4861 aa9.44□□□□□ -0.9
PFDN4-201ENST00000371419 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
PFDN4-201ENST00000371419 Q8N377 158 aa9.44□□□□□ -0.9
PFDN4-201ENST00000371419 DEFB105AQ8NG35 78 aa9.44□□□□□ -0.9
PFDN4-201ENST00000371419 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
PFDN4-201ENST00000371419 IMUPQ9GZP8 106 aa9.42□□□□□ -0.9
PFDN4-201ENST00000371419 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
PFDN4-201ENST00000371419 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
PFDN4-201ENST00000371419 LINC00483Q53H64 154 aa9.4□□□□□ -0.9
PFDN4-201ENST00000371419 KRTAP13-2Q52LG2 175 aa9.4□□□□□ -0.91
PFDN4-201ENST00000371419 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.91
PFDN4-201ENST00000371419 Q6JHZ5 121 aa9.39□□□□□ -0.91
PFDN4-201ENST00000371419 ST20-AS1Q8NBB2 130 aa9.39□□□□□ -0.91
PFDN4-201ENST00000371419 UBL5Q9BZL1 73 aa9.39□□□□□ -0.91
PFDN4-201ENST00000371419 ATP5EP2Q5VTU8 51 aa9.35□□□□□ -0.91
PFDN4-201ENST00000371419 C3orf22Q8N5N4 141 aa9.35□□□□□ -0.91
PFDN4-201ENST00000371419 A0A1B0GW54 56 aa9.34□□□□□ -0.91
PFDN4-201ENST00000371419 F8WEM9 126 aa9.34□□□□□ -0.91
PFDN4-201ENST00000371419 SPRR1BP22528 89 aa9.33□□□□□ -0.92
PFDN4-201ENST00000371419 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
PFDN4-201ENST00000371419 IGLV9-49A0A0B4J1Y8 123 aa9.3□□□□□ -0.92
PFDN4-201ENST00000371419 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
PFDN4-201ENST00000371419 MOBPQ13875 183 aa9.28□□□□□ -0.92
PFDN4-201ENST00000371419 Q6ZVQ6 151 aa9.28□□□□□ -0.92
PFDN4-201ENST00000371419 IGLV8-61A0A075B6I0 122 aa9.28□□□□□ -0.92
PFDN4-201ENST00000371419 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
PFDN4-201ENST00000371419 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
PFDN4-201ENST00000371419 C9orf153Q5TBE3 101 aa9.26□□□□□ -0.93
PFDN4-201ENST00000371419 Q8NBF4 154 aa9.26□□□□□ -0.93
PFDN4-201ENST00000371419 LOC100996750A0A140TA64 210 aa9.24□□□□□ -0.93
PFDN4-201ENST00000371419 CXCL6P80162 114 aa9.24□□□□□ -0.93
PFDN4-201ENST00000371419 SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
PFDN4-201ENST00000371419 KRTAP4-6Q9BYQ5 205 aa9.24□□□□□ -0.93
PFDN4-201ENST00000371419 A0A1W2PNM2 257 aa9.23□□□□□ -0.93
PFDN4-201ENST00000371419 NREPQ16612 68 aa9.22□□□□□ -0.93
PFDN4-201ENST00000371419 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
PFDN4-201ENST00000371419 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
PFDN4-201ENST00000371419 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
PFDN4-201ENST00000371419 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
PFDN4-201ENST00000371419 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
PFDN4-201ENST00000371419 IGFL1Q6UW32 110 aa9.2□□□□□ -0.94
PFDN4-201ENST00000371419 SPINK1P00995 79 aa9.18□□□□□ -0.94
PFDN4-201ENST00000371419 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
PFDN4-201ENST00000371419 ATOX1O00244 68 aa9.15□□□□□ -0.95
PFDN4-201ENST00000371419 A0A087WVE0 104 aa9.13□□□□□ -0.95
PFDN4-201ENST00000371419 BPY2O14599 106 aa9.13□□□□□ -0.95
PFDN4-201ENST00000371419 RPS29P62273 56 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms