RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PRB2P02812 416 aaPredicted RBP4.79□□□□□ -1.64
CNOT4-201ENST00000315544 Q1RN00 199 aa4.79□□□□□ -1.64
CNOT4-201ENST00000315544 PANO1I0J062 215 aa4.79□□□□□ -1.64
CNOT4-201ENST00000315544 COX7BP24311 80 aa4.79□□□□□ -1.64
CNOT4-201ENST00000315544 LPAP08519 4548 aa4.78□□□□□ -1.64
CNOT4-201ENST00000315544 LINC00472Q9H8W2 130 aa4.78□□□□□ -1.64
CNOT4-201ENST00000315544 C6orf226Q5I0X4 101 aa4.77□□□□□ -1.65
CNOT4-201ENST00000315544 IGKV3D-7A0A0C4DH55 119 aa4.77□□□□□ -1.65
CNOT4-201ENST00000315544 C9orf163Q8N9P6 203 aa4.77□□□□□ -1.65
CNOT4-201ENST00000315544 IGLV10-54A0A075B6I4 117 aa4.77□□□□□ -1.65
CNOT4-201ENST00000315544 SPART-AS1P0CW21 52 aa4.77□□□□□ -1.65
CNOT4-201ENST00000315544 RTL8CO15255 209 aa4.76□□□□□ -1.65
CNOT4-201ENST00000315544 SMIM20Q8N5G0 67 aa4.76□□□□□ -1.65
CNOT4-201ENST00000315544 PDE6GP18545 87 aa4.76□□□□□ -1.65
CNOT4-201ENST00000315544 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
CNOT4-201ENST00000315544 NOTCH1P46531 2555 aa4.75□□□□□ -1.65
CNOT4-201ENST00000315544 RBM3P98179 157 aaKnown RBP4.75□□□□□ -1.65
CNOT4-201ENST00000315544 Q6ZSA8 131 aa4.75□□□□□ -1.65
CNOT4-201ENST00000315544 IGKV3OR2-268A0A0C4DH90 116 aa4.75□□□□□ -1.65
CNOT4-201ENST00000315544 A0A1W2PNN7 141 aa4.75□□□□□ -1.65
CNOT4-201ENST00000315544 PRYO14603 147 aa4.75□□□□□ -1.65
CNOT4-201ENST00000315544 ANGP03950 147 aaKnown RBP4.75□□□□□ -1.65
CNOT4-201ENST00000315544 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
CNOT4-201ENST00000315544 KLK12Q9UKR0 248 aa4.74□□□□□ -1.65
CNOT4-201ENST00000315544 CYP4F30PQ9H0H9 118 aa4.73□□□□□ -1.65
CNOT4-201ENST00000315544 ST20-AS1Q8NBB2 130 aa4.73□□□□□ -1.65
CNOT4-201ENST00000315544 XAGE1AQ9HD64 81 aa4.72□□□□□ -1.65
CNOT4-201ENST00000315544 Q8N9L7 120 aa4.72□□□□□ -1.65
CNOT4-201ENST00000315544 Q8NBF4 154 aa4.72□□□□□ -1.65
CNOT4-201ENST00000315544 C4orf26Q17RF5 130 aa4.71□□□□□ -1.65
CNOT4-201ENST00000315544 DIRC1Q969H9 104 aa4.71□□□□□ -1.65
CNOT4-201ENST00000315544 TOMM7Q9P0U1 55 aa4.71□□□□□ -1.65
CNOT4-201ENST00000315544 DAD1P61803 113 aa4.71□□□□□ -1.66
CNOT4-201ENST00000315544 DSCR8Q96T75 97 aa4.71□□□□□ -1.66
CNOT4-201ENST00000315544 LINC00336Q6ZUF6 198 aa4.7□□□□□ -1.66
CNOT4-201ENST00000315544 BPY2O14599 106 aa4.7□□□□□ -1.66
CNOT4-201ENST00000315544 IGFL1Q6UW32 110 aa4.7□□□□□ -1.66
CNOT4-201ENST00000315544 J3KT08 172 aa4.69□□□□□ -1.66
CNOT4-201ENST00000315544 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
CNOT4-201ENST00000315544 C9orf153Q5TBE3 101 aa4.69□□□□□ -1.66
CNOT4-201ENST00000315544 hDV103S1A0JD37 113 aa4.69□□□□□ -1.66
CNOT4-201ENST00000315544 RMI2Q96E14 147 aa4.68□□□□□ -1.66
CNOT4-201ENST00000315544 C16orf90A8MZG2 172 aa4.68□□□□□ -1.66
CNOT4-201ENST00000315544 DNAL4O96015 105 aa4.68□□□□□ -1.66
CNOT4-201ENST00000315544 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
CNOT4-201ENST00000315544 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
CNOT4-201ENST00000315544 A0A096LNI7 61 aa4.67□□□□□ -1.66
CNOT4-201ENST00000315544 SERP1Q9Y6X1 66 aa4.67□□□□□ -1.66
CNOT4-201ENST00000315544 C11orf45Q8TAV5 145 aa4.67□□□□□ -1.66
CNOT4-201ENST00000315544 Q1T7F1 81 aa4.66□□□□□ -1.66
CNOT4-201ENST00000315544 SPACA4Q8TDM5 124 aa4.66□□□□□ -1.66
CNOT4-201ENST00000315544 K7EQZ3 153 aa4.66□□□□□ -1.66
CNOT4-201ENST00000315544 HIGD2BQ4VC39 106 aa4.66□□□□□ -1.66
CNOT4-201ENST00000315544 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.66
CNOT4-201ENST00000315544 IGKV2D-24A0A075B6R9 120 aa4.65□□□□□ -1.67
CNOT4-201ENST00000315544 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
CNOT4-201ENST00000315544 SYCNQ0VAF6 134 aa4.64□□□□□ -1.67
CNOT4-201ENST00000315544 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.64□□□□□ -1.67
CNOT4-201ENST00000315544 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
CNOT4-201ENST00000315544 MRPL55Q7Z7F7 128 aaKnown RBP4.64□□□□□ -1.67
CNOT4-201ENST00000315544 DHRS4-AS1Q9P1J3 65 aa4.64□□□□□ -1.67
CNOT4-201ENST00000315544 TMEM254Q8TBM7 123 aa4.63□□□□□ -1.67
CNOT4-201ENST00000315544 LINC00474Q9P2X8 69 aa4.63□□□□□ -1.67
CNOT4-201ENST00000315544 NREPQ16612 68 aa4.63□□□□□ -1.67
CNOT4-201ENST00000315544 A0A0G2JQZ4 141 aa4.62□□□□□ -1.67
CNOT4-201ENST00000315544 Q8N9P0 234 aaPredicted RBP4.61□□□□□ -1.67
CNOT4-201ENST00000315544 NBDYA0A0U1RRE5 68 aa4.61□□□□□ -1.67
CNOT4-201ENST00000315544 NDUFC1O43677 76 aa4.6□□□□□ -1.67
CNOT4-201ENST00000315544 CAMK2N2Q96S95 79 aa4.6□□□□□ -1.67
CNOT4-201ENST00000315544 DEFB131BA0A096LNP1 70 aa4.6□□□□□ -1.67
CNOT4-201ENST00000315544 RPL37AP8A6NKH3 93 aa4.6□□□□□ -1.67
CNOT4-201ENST00000315544 UBL5Q9BZL1 73 aa4.6□□□□□ -1.67
CNOT4-201ENST00000315544 C5orf47Q569G3 176 aa4.59□□□□□ -1.67
CNOT4-201ENST00000315544 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.68
CNOT4-201ENST00000315544 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
CNOT4-201ENST00000315544 FAM236DA0A1B0GTK5 79 aa4.58□□□□□ -1.68
CNOT4-201ENST00000315544 F8WEM9 126 aa4.58□□□□□ -1.68
CNOT4-201ENST00000315544 FAM236CP0DP71 79 aa4.58□□□□□ -1.68
CNOT4-201ENST00000315544 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
CNOT4-201ENST00000315544 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
CNOT4-201ENST00000315544 MOBPQ13875 183 aa4.57□□□□□ -1.68
CNOT4-201ENST00000315544 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
CNOT4-201ENST00000315544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.57□□□□□ -1.68
CNOT4-201ENST00000315544 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
CNOT4-201ENST00000315544 REG3GQ6UW15 175 aa4.57□□□□□ -1.68
CNOT4-201ENST00000315544 HIGD2AQ9BW72 106 aa4.57□□□□□ -1.68
CNOT4-201ENST00000315544 A0A087X002 238 aa4.56□□□□□ -1.68
CNOT4-201ENST00000315544 C1orf137Q5JT78 98 aa4.56□□□□□ -1.68
CNOT4-201ENST00000315544 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
CNOT4-201ENST00000315544 PRR26Q8N8Z3 221 aa4.56□□□□□ -1.68
CNOT4-201ENST00000315544 TRAV22A0A0B4J277 110 aa4.55□□□□□ -1.68
CNOT4-201ENST00000315544 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
CNOT4-201ENST00000315544 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
CNOT4-201ENST00000315544 C1orf64Q8NEQ6 169 aa4.55□□□□□ -1.68
CNOT4-201ENST00000315544 SNURFQ9Y675 71 aa4.55□□□□□ -1.68
CNOT4-201ENST00000315544 RPL37AP61513 92 aaKnown RBP4.54□□□□□ -1.68
CNOT4-201ENST00000315544 A8MU10 97 aa4.54□□□□□ -1.68
CNOT4-201ENST00000315544 SCXQ7RTU7 201 aa4.54□□□□□ -1.68
CNOT4-201ENST00000315544 LOC101927531A0A1B0GV80 90 aa4.54□□□□□ -1.68
CNOT4-201ENST00000315544 PSCAO43653 123 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms