RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 C6orf223Q8N319 242 aa3.23□□□□□ -1.89
CKS1B-201ENST00000308987 IGKV3D-7A0A0C4DH55 119 aa3.22□□□□□ -1.89
CKS1B-201ENST00000308987 F8WDY8 70 aa3.22□□□□□ -1.89
CKS1B-201ENST00000308987 CDK2AP2O75956 126 aa3.22□□□□□ -1.89
CKS1B-201ENST00000308987 RBM3P98179 157 aaKnown RBP3.22□□□□□ -1.89
CKS1B-201ENST00000308987 LELP1Q5T871 98 aa3.22□□□□□ -1.89
CKS1B-201ENST00000308987 PRR34Q9NV39 138 aa3.22□□□□□ -1.89
CKS1B-201ENST00000308987 LOC107984640A0A0U1RRK4 108 aa3.21□□□□□ -1.9
CKS1B-201ENST00000308987 ANGP03950 147 aaKnown RBP3.21□□□□□ -1.9
CKS1B-201ENST00000308987 DAD1P61803 113 aa3.21□□□□□ -1.9
CKS1B-201ENST00000308987 C6orf99Q4VX62 202 aa3.21□□□□□ -1.9
CKS1B-201ENST00000308987 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.21□□□□□ -1.9
CKS1B-201ENST00000308987 Q6ZQT0 140 aa3.21□□□□□ -1.9
CKS1B-201ENST00000308987 LINC00269Q8N2A0 174 aa3.21□□□□□ -1.9
CKS1B-201ENST00000308987 TRAV7A0A075B6U4 112 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 C16orf90A8MZG2 172 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 H3BNG1 76 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 SPART-AS1P0CW21 52 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 CXCL6P80162 114 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 SPAG11BQ08648 103 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 C1orf134Q5TEV5 83 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 DPH3Q96FX2 82 aa3.2□□□□□ -1.9
CKS1B-201ENST00000308987 TRBV7-4A0A0J9YYF1 115 aa3.19□□□□□ -1.9
CKS1B-201ENST00000308987 DIRC1Q969H9 104 aa3.19□□□□□ -1.9
CKS1B-201ENST00000308987 DSCR8Q96T75 97 aa3.19□□□□□ -1.9
CKS1B-201ENST00000308987 TRAV23DV6A0A075B6W5 121 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 A0A087WVE0 104 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 NBDYA0A0U1RRE5 68 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 A0A1B0GW54 56 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 HTN3P15516 51 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 COX7BP24311 80 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 FUSP35637 526 aaKnown RBP eCLIP3.18□□□□□ -1.9
CKS1B-201ENST00000308987 ELOF1P60002 83 aaKnown RBP3.18□□□□□ -1.9
CKS1B-201ENST00000308987 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
CKS1B-201ENST00000308987 C5orf47Q569G3 176 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 C9orf116Q5BN46 136 aaPredicted RBP3.18□□□□□ -1.9
CKS1B-201ENST00000308987 CLPSL2Q6UWE3 100 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 ENHOQ6UWT2 76 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 UBE2DNLQ8IWF7 75 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
CKS1B-201ENST00000308987 M0R378 163 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 NDUFC1O43677 76 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 ZNF73O43830 326 aaPredicted RBP3.17□□□□□ -1.9
CKS1B-201ENST00000308987 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 LINC01547P58512 204 aaPredicted RBP3.17□□□□□ -1.9
CKS1B-201ENST00000308987 KLKP1Q107X0 134 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 Q6ZQY7 126 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 Q6ZVQ6 151 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 FAM19A5Q7Z5A7 132 aaPredicted RBP3.17□□□□□ -1.9
CKS1B-201ENST00000308987 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 Q8NDZ9 215 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 LINC00588Q9Y4M8 146 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 TNXBP22105 4242 aa3.17□□□□□ -1.9
CKS1B-201ENST00000308987 IGLV10-54A0A075B6I4 117 aa3.16□□□□□ -1.9
CKS1B-201ENST00000308987 A0A096LPF7 62 aa3.16□□□□□ -1.9
CKS1B-201ENST00000308987 EPM2AB3EWF7 344 aa3.16□□□□□ -1.9
CKS1B-201ENST00000308987 VPREB1P12018 145 aa3.16□□□□□ -1.9
CKS1B-201ENST00000308987 ATP5EP56381 51 aaPredicted RBP3.16□□□□□ -1.9
CKS1B-201ENST00000308987 C6orf48Q9UBA6 75 aa3.16□□□□□ -1.9
CKS1B-201ENST00000308987 LRP2P98164 4655 aa3.16□□□□□ -1.9
CKS1B-201ENST00000308987 KRTAP26-1Q6PEX3 210 aa3.15□□□□□ -1.91
CKS1B-201ENST00000308987 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
CKS1B-201ENST00000308987 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
CKS1B-201ENST00000308987 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
CKS1B-201ENST00000308987 SERP1Q9Y6X1 66 aa3.15□□□□□ -1.91
CKS1B-201ENST00000308987 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
CKS1B-201ENST00000308987 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
CKS1B-201ENST00000308987 HAMPP81172 84 aa3.14□□□□□ -1.91
CKS1B-201ENST00000308987 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
CKS1B-201ENST00000308987 CAMK2N2Q96S95 79 aa3.14□□□□□ -1.91
CKS1B-201ENST00000308987 H7BZZ5 65 aa3.13□□□□□ -1.91
CKS1B-201ENST00000308987 KRTAP10-1P60331 282 aa3.13□□□□□ -1.91
CKS1B-201ENST00000308987 ESRGQ1W209 222 aa3.13□□□□□ -1.91
CKS1B-201ENST00000308987 KCNQ1DNQ9H478 68 aa3.13□□□□□ -1.91
CKS1B-201ENST00000308987 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 IGLV5-37A0A075B6J1 123 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 TLX1NBP0CAT3 122 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 LINC01556Q5JQF7 62 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 Q5VSD8 79 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 XAGE1AQ9HD64 81 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
CKS1B-201ENST00000308987 SMIM26A0A096LP01 95 aa3.11□□□□□ -1.91
CKS1B-201ENST00000308987 OXTP01178 125 aa3.11□□□□□ -1.91
CKS1B-201ENST00000308987 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-201ENST00000308987 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
CKS1B-201ENST00000308987 SYCNQ0VAF6 134 aa3.11□□□□□ -1.91
CKS1B-201ENST00000308987 NREPQ16612 68 aa3.11□□□□□ -1.91
CKS1B-201ENST00000308987 Q6ZRU5 148 aa3.11□□□□□ -1.91
CKS1B-201ENST00000308987 BPY2O14599 106 aa3.1□□□□□ -1.91
CKS1B-201ENST00000308987 HIGD2BQ4VC39 106 aa3.1□□□□□ -1.91
CKS1B-201ENST00000308987 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
CKS1B-201ENST00000308987 Q5XG85 94 aa3.1□□□□□ -1.91
CKS1B-201ENST00000308987 WFDC10BQ8IUB3 73 aa3.1□□□□□ -1.91
CKS1B-201ENST00000308987 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
CKS1B-201ENST00000308987 IGKV4-1P06312 121 aa3.09□□□□□ -1.91
CKS1B-201ENST00000308987 SPRR1AP35321 89 aa3.09□□□□□ -1.91
CKS1B-201ENST00000308987 Q6ZRP5 223 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms