RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CRYGAP11844 174 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 COX7CP15954 63 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 Q6ZVQ6 151 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 SMIM29Q86T20 159 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 SPACA4Q8TDM5 124 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 UBL5Q9BZL1 73 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 LINC00474Q9P2X8 69 aa4.08□□□□□ -1.76
USP47-201ENST00000305481 A0A087WVE0 104 aa4.07□□□□□ -1.76
USP47-201ENST00000305481 LY6G6CO95867 125 aa4.07□□□□□ -1.76
USP47-201ENST00000305481 HIST1H4AP62805 103 aaKnown RBP4.07□□□□□ -1.76
USP47-201ENST00000305481 RTL8CO15255 209 aa4.07□□□□□ -1.76
USP47-201ENST00000305481 C1orf134Q5TEV5 83 aa4.07□□□□□ -1.76
USP47-201ENST00000305481 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
USP47-201ENST00000305481 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
USP47-201ENST00000305481 FP248Q71RG6 208 aaPredicted RBP4.06□□□□□ -1.76
USP47-201ENST00000305481 HIGD2AQ9BW72 106 aa4.06□□□□□ -1.76
USP47-201ENST00000305481 ALMS1Q8TCU4 4167 aa4.06□□□□□ -1.76
USP47-201ENST00000305481 ATP5EP2Q5VTU8 51 aa4.06□□□□□ -1.76
USP47-201ENST00000305481 LINC00476Q8WZB0 136 aa4.06□□□□□ -1.76
USP47-201ENST00000305481 DNAH11Q96DT5 4516 aa4.05□□□□□ -1.76
USP47-201ENST00000305481 A0A1W2PNM2 257 aa4.05□□□□□ -1.76
USP47-201ENST00000305481 H0Y9J4 135 aa4.05□□□□□ -1.76
USP47-201ENST00000305481 WWC2-AS2Q96NR7 200 aa4.05□□□□□ -1.76
USP47-201ENST00000305481 HAMPP81172 84 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 KRTAP13-1Q8IUC0 172 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 FAT2Q9NYQ8 4349 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 DNAH5Q8TE73 4624 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 A0A0G2JQZ4 141 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 C3orf84H3BNL1 204 aa4.04□□□□□ -1.76
USP47-201ENST00000305481 BCE1O60756 84 aa4.03□□□□□ -1.76
USP47-201ENST00000305481 TMEM258P61165 79 aa4.03□□□□□ -1.76
USP47-201ENST00000305481 PKD1P98161 4303 aa4.03□□□□□ -1.76
USP47-201ENST00000305481 IGLV5-52A0A0A0MRZ9 124 aa4.03□□□□□ -1.76
USP47-201ENST00000305481 CXCL6P80162 114 aa4.03□□□□□ -1.76
USP47-201ENST00000305481 SCXQ7RTU7 201 aa4.03□□□□□ -1.76
USP47-201ENST00000305481 UBE2AP49459 152 aa4.02□□□□□ -1.77
USP47-201ENST00000305481 Q8NBF4 154 aa4.02□□□□□ -1.77
USP47-201ENST00000305481 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
USP47-201ENST00000305481 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
USP47-201ENST00000305481 SPRR1BP22528 89 aa4.02□□□□□ -1.77
USP47-201ENST00000305481 SPRR4Q96PI1 79 aa4.02□□□□□ -1.77
USP47-201ENST00000305481 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
USP47-201ENST00000305481 H3BS24 57 aa4.01□□□□□ -1.77
USP47-201ENST00000305481 KRTAP10-2P60368 255 aa4.01□□□□□ -1.77
USP47-201ENST00000305481 IGFL1Q6UW32 110 aa4.01□□□□□ -1.77
USP47-201ENST00000305481 NREPQ16612 68 aa4.01□□□□□ -1.77
USP47-201ENST00000305481 PSORS1C2Q9UIG4 136 aa4□□□□□ -1.77
USP47-201ENST00000305481 A0A1B0GW54 56 aa4□□□□□ -1.77
USP47-201ENST00000305481 F8WEM9 126 aa4□□□□□ -1.77
USP47-201ENST00000305481 ATOX1O00244 68 aa4□□□□□ -1.77
USP47-201ENST00000305481 Q8N9L7 120 aa3.99□□□□□ -1.77
USP47-201ENST00000305481 FAM30AQ9NZY2 134 aa3.99□□□□□ -1.77
USP47-201ENST00000305481 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
USP47-201ENST00000305481 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
USP47-201ENST00000305481 BPY2O14599 106 aa3.97□□□□□ -1.77
USP47-201ENST00000305481 SERP2Q8N6R1 65 aa3.97□□□□□ -1.77
USP47-201ENST00000305481 CD164Q04900 197 aa3.97□□□□□ -1.77
USP47-201ENST00000305481 FAM229BQ4G0N7 80 aa3.97□□□□□ -1.77
USP47-201ENST00000305481 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.77
USP47-201ENST00000305481 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
USP47-201ENST00000305481 MPLKIPQ8TAP9 179 aa3.96□□□□□ -1.78
USP47-201ENST00000305481 CIRBP-AS1Q8TBR5 109 aa3.96□□□□□ -1.78
USP47-201ENST00000305481 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
USP47-201ENST00000305481 DSCR10P59022 87 aa3.96□□□□□ -1.78
USP47-201ENST00000305481 KRTAP10-1P60331 282 aa3.96□□□□□ -1.78
USP47-201ENST00000305481 A0A087WSZ3 146 aa3.95□□□□□ -1.78
USP47-201ENST00000305481 ZNF861PO60384 105 aa3.95□□□□□ -1.78
USP47-201ENST00000305481 A8MU10 97 aa3.95□□□□□ -1.78
USP47-201ENST00000305481 Q6ZSA8 131 aa3.95□□□□□ -1.78
USP47-201ENST00000305481 ANAPC11Q9NYG5 84 aa3.94□□□□□ -1.78
USP47-201ENST00000305481 DEFB116Q30KQ4 102 aa3.94□□□□□ -1.78
USP47-201ENST00000305481 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
USP47-201ENST00000305481 IGLV9-49A0A0B4J1Y8 123 aa3.93□□□□□ -1.78
USP47-201ENST00000305481 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
USP47-201ENST00000305481 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
USP47-201ENST00000305481 K7EQZ3 153 aa3.93□□□□□ -1.78
USP47-201ENST00000305481 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
USP47-201ENST00000305481 C20orf197Q8N268 126 aa3.92□□□□□ -1.78
USP47-201ENST00000305481 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
USP47-201ENST00000305481 ZNF706Q9Y5V0 76 aaPredicted RBP3.92□□□□□ -1.78
USP47-201ENST00000305481 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
USP47-201ENST00000305481 H7BZZ5 65 aa3.91□□□□□ -1.78
USP47-201ENST00000305481 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
USP47-201ENST00000305481 RPL37AP61513 92 aaKnown RBP3.9□□□□□ -1.78
USP47-201ENST00000305481 MOBPQ13875 183 aa3.9□□□□□ -1.78
USP47-201ENST00000305481 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
USP47-201ENST00000305481 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
USP47-201ENST00000305481 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
USP47-201ENST00000305481 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
USP47-201ENST00000305481 RYR2Q92736 4967 aa3.88□□□□□ -1.79
USP47-201ENST00000305481 LCE6AA0A183 80 aa3.88□□□□□ -1.79
USP47-201ENST00000305481 PRR15Q8IV56 129 aa3.88□□□□□ -1.79
USP47-201ENST00000305481 Q96NJ1 140 aa3.88□□□□□ -1.79
USP47-201ENST00000305481 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
USP47-201ENST00000305481 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
USP47-201ENST00000305481 A8MWP4 228 aa3.86□□□□□ -1.79
USP47-201ENST00000305481 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
USP47-201ENST00000305481 KLKP1Q107X0 134 aa3.86□□□□□ -1.79
USP47-201ENST00000305481 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms