RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OXLD1Q5BKU9 147 aa9.12□□□□□ -0.95
PHGDH-233ENST00000642021 ESRGQ1W209 222 aa9.12□□□□□ -0.95
PHGDH-233ENST00000642021 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
PHGDH-233ENST00000642021 M0R378 163 aa9.11□□□□□ -0.95
PHGDH-233ENST00000642021 PDE6GP18545 87 aa9.11□□□□□ -0.95
PHGDH-233ENST00000642021 Q6ZRP5 223 aa9.11□□□□□ -0.95
PHGDH-233ENST00000642021 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
PHGDH-233ENST00000642021 H3BQ85 93 aa9.1□□□□□ -0.95
PHGDH-233ENST00000642021 KRTAP10-11P60412 298 aa9.1□□□□□ -0.95
PHGDH-233ENST00000642021 CD164Q04900 197 aa9.1□□□□□ -0.95
PHGDH-233ENST00000642021 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
PHGDH-233ENST00000642021 TRBV7-6A0A0J9YX20 115 aa9.09□□□□□ -0.95
PHGDH-233ENST00000642021 H3BNG1 76 aa9.08□□□□□ -0.96
PHGDH-233ENST00000642021 CXCL6P80162 114 aa9.08□□□□□ -0.96
PHGDH-233ENST00000642021 IGKV2D-24A0A075B6R9 120 aa9.06□□□□□ -0.96
PHGDH-233ENST00000642021 TRAV7A0A075B6U4 112 aa9.06□□□□□ -0.96
PHGDH-233ENST00000642021 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
PHGDH-233ENST00000642021 H7BZZ5 65 aa9.03□□□□□ -0.96
PHGDH-233ENST00000642021 BCE1O60756 84 aa9.03□□□□□ -0.96
PHGDH-233ENST00000642021 SNURFQ9Y675 71 aa9.03□□□□□ -0.96
PHGDH-233ENST00000642021 SYCNQ0VAF6 134 aa9.02□□□□□ -0.96
PHGDH-233ENST00000642021 Q8N9L7 120 aa9.02□□□□□ -0.96
PHGDH-233ENST00000642021 TM2D3Q9BRN9 247 aa9.02□□□□□ -0.96
PHGDH-233ENST00000642021 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
PHGDH-233ENST00000642021 DEFB105AQ8NG35 78 aa9.01□□□□□ -0.97
PHGDH-233ENST00000642021 RMI2Q96E14 147 aa9.01□□□□□ -0.97
PHGDH-233ENST00000642021 DEFB131BA0A096LNP1 70 aa9.01□□□□□ -0.97
PHGDH-233ENST00000642021 C7orf33Q8WU49 177 aa9.01□□□□□ -0.97
PHGDH-233ENST00000642021 FLNBO75369 2602 aaKnown RBP9□□□□□ -0.97
PHGDH-233ENST00000642021 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
PHGDH-233ENST00000642021 KCNQ1DNQ9H478 68 aa9□□□□□ -0.97
PHGDH-233ENST00000642021 MAST4O15021 2626 aa9□□□□□ -0.97
PHGDH-233ENST00000642021 STAB1Q9NY15 2570 aa9□□□□□ -0.97
PHGDH-233ENST00000642021 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
PHGDH-233ENST00000642021 Q8N377 158 aa8.99□□□□□ -0.97
PHGDH-233ENST00000642021 MPLKIPQ8TAP9 179 aa8.99□□□□□ -0.97
PHGDH-233ENST00000642021 FBN1P35555 2871 aaKnown RBP8.98□□□□□ -0.97
PHGDH-233ENST00000642021 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
PHGDH-233ENST00000642021 NKAPP1Q8N9T2 125 aa8.98□□□□□ -0.97
PHGDH-233ENST00000642021 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
PHGDH-233ENST00000642021 RPL37AP8A6NKH3 93 aa8.97□□□□□ -0.97
PHGDH-233ENST00000642021 CASC10Q5T4H9 136 aa8.97□□□□□ -0.97
PHGDH-233ENST00000642021 C11orf45Q8TAV5 145 aa8.96□□□□□ -0.97
PHGDH-233ENST00000642021 NOTCH1P46531 2555 aa8.96□□□□□ -0.97
PHGDH-233ENST00000642021 MRPL55Q7Z7F7 128 aaKnown RBP8.96□□□□□ -0.98
PHGDH-233ENST00000642021 BPY2O14599 106 aa8.95□□□□□ -0.98
PHGDH-233ENST00000642021 NREPQ16612 68 aa8.95□□□□□ -0.98
PHGDH-233ENST00000642021 PRR15Q8IV56 129 aa8.95□□□□□ -0.98
PHGDH-233ENST00000642021 IGKV4-1P06312 121 aa8.95□□□□□ -0.98
PHGDH-233ENST00000642021 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
PHGDH-233ENST00000642021 Q9BRP9 147 aa8.94□□□□□ -0.98
PHGDH-233ENST00000642021 F8WEM9 126 aa8.94□□□□□ -0.98
PHGDH-233ENST00000642021 DNAH10OSP0CZ25 163 aa8.94□□□□□ -0.98
PHGDH-233ENST00000642021 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
PHGDH-233ENST00000642021 KRTAP4-16G5E9R7 235 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-233ENST00000642021 F8P00451 2351 aa8.93□□□□□ -0.98
PHGDH-233ENST00000642021 DNAH1Q9P2D7 4330 aa8.92□□□□□ -0.98
PHGDH-233ENST00000642021 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
PHGDH-233ENST00000642021 Q6ZRX8 168 aa8.91□□□□□ -0.98
PHGDH-233ENST00000642021 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
PHGDH-233ENST00000642021 DNAH3Q8TD57 4116 aa8.91□□□□□ -0.98
PHGDH-233ENST00000642021 IGLV1-50A0A075B6I6 118 aa8.9□□□□□ -0.98
PHGDH-233ENST00000642021 LINC00588Q9Y4M8 146 aa8.9□□□□□ -0.98
PHGDH-233ENST00000642021 A0A1W2PNM2 257 aa8.9□□□□□ -0.98
PHGDH-233ENST00000642021 BAHCC1Q9P281 2608 aa8.9□□□□□ -0.99
PHGDH-233ENST00000642021 ERC2-IT1O76042 136 aa8.89□□□□□ -0.99
PHGDH-233ENST00000642021 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
PHGDH-233ENST00000642021 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
PHGDH-233ENST00000642021 SPRR1AP35321 89 aa8.88□□□□□ -0.99
PHGDH-233ENST00000642021 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
PHGDH-233ENST00000642021 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
PHGDH-233ENST00000642021 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
PHGDH-233ENST00000642021 DHRS4-AS1Q9P1J3 65 aa8.88□□□□□ -0.99
PHGDH-233ENST00000642021 TNP2Q05952 138 aa8.87□□□□□ -0.99
PHGDH-233ENST00000642021 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
PHGDH-233ENST00000642021 PRB2P02812 416 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-233ENST00000642021 RBM12B-AS1Q9P1G2 102 aa8.86□□□□□ -0.99
PHGDH-233ENST00000642021 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
PHGDH-233ENST00000642021 C1orf137Q5JT78 98 aa8.85□□□□□ -0.99
PHGDH-233ENST00000642021 PRYO14603 147 aa8.85□□□□□ -0.99
PHGDH-233ENST00000642021 NBEAL1Q6ZS30 2694 aa8.85□□□□□ -0.99
PHGDH-233ENST00000642021 DNAH10Q8IVF4 4471 aa8.84□□□□□ -0.99
PHGDH-233ENST00000642021 LYSTQ99698 3801 aa8.84□□□□□ -0.99
PHGDH-233ENST00000642021 FUSP35637 526 aaKnown RBP eCLIP8.84□□□□□ -1
PHGDH-233ENST00000642021 NDUFC1O43677 76 aa8.82□□□□□ -1
PHGDH-233ENST00000642021 H3BS24 57 aa8.82□□□□□ -1
PHGDH-233ENST00000642021 HUWE1Q7Z6Z7 4374 aaKnown RBP8.82□□□□□ -1
PHGDH-233ENST00000642021 A0A0G2JQZ4 141 aa8.81□□□□□ -1
PHGDH-233ENST00000642021 A0A1W2PNN7 141 aa8.81□□□□□ -1
PHGDH-233ENST00000642021 Q8NBF4 154 aa8.81□□□□□ -1
PHGDH-233ENST00000642021 SMIM29Q86T20 159 aa8.81□□□□□ -1
PHGDH-233ENST00000642021 COL6A5A8TX70 2615 aa8.81□□□□□ -1
PHGDH-233ENST00000642021 UBE2BP63146 152 aa8.8□□□□□ -1
PHGDH-233ENST00000642021 HIGD2AQ9BW72 106 aa8.8□□□□□ -1
PHGDH-233ENST00000642021 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
PHGDH-233ENST00000642021 SPRR4Q96PI1 79 aa8.79□□□□□ -1
PHGDH-233ENST00000642021 FAM30AQ9NZY2 134 aa8.79□□□□□ -1
PHGDH-233ENST00000642021 DSCR10P59022 87 aa8.78□□□□□ -1
PHGDH-233ENST00000642021 CSMD3Q7Z407 3707 aa8.77□□□□□ -1
PHGDH-233ENST00000642021 A0A1B0GW54 56 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms