RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 Q6Q795 121 aa9.31□□□□□ -0.92
CHD1L-211ENST00000639534 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
CHD1L-211ENST00000639534 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
CHD1L-211ENST00000639534 LINC00643Q86TS7 51 aa9.31□□□□□ -0.92
CHD1L-211ENST00000639534 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
CHD1L-211ENST00000639534 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
CHD1L-211ENST00000639534 LINC00474Q9P2X8 69 aa9.3□□□□□ -0.92
CHD1L-211ENST00000639534 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
CHD1L-211ENST00000639534 A0A096LNI7 61 aa9.29□□□□□ -0.92
CHD1L-211ENST00000639534 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.28□□□□□ -0.92
CHD1L-211ENST00000639534 Q6ZRX8 168 aa9.28□□□□□ -0.92
CHD1L-211ENST00000639534 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
CHD1L-211ENST00000639534 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.93
CHD1L-211ENST00000639534 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
CHD1L-211ENST00000639534 B5MCH6 92 aa9.27□□□□□ -0.93
CHD1L-211ENST00000639534 KRTAP4-16G5E9R7 235 aaPredicted RBP9.27□□□□□ -0.93
CHD1L-211ENST00000639534 DSCR8Q96T75 97 aa9.27□□□□□ -0.93
CHD1L-211ENST00000639534 IMUPQ9GZP8 106 aa9.27□□□□□ -0.93
CHD1L-211ENST00000639534 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
CHD1L-211ENST00000639534 IGKV2-24A0A0C4DH68 120 aa9.25□□□□□ -0.93
CHD1L-211ENST00000639534 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
CHD1L-211ENST00000639534 Q6ZR54 194 aa9.25□□□□□ -0.93
CHD1L-211ENST00000639534 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
CHD1L-211ENST00000639534 Q6ZQT0 140 aa9.24□□□□□ -0.93
CHD1L-211ENST00000639534 MEGF8Q7Z7M0 2845 aa9.24□□□□□ -0.93
CHD1L-211ENST00000639534 M0R2N4 97 aa9.23□□□□□ -0.93
CHD1L-211ENST00000639534 A0A087WTM6 91 aa9.22□□□□□ -0.93
CHD1L-211ENST00000639534 A0A1B0GV72 72 aa9.22□□□□□ -0.93
CHD1L-211ENST00000639534 SMCR5Q8TEV8 140 aa9.22□□□□□ -0.93
CHD1L-211ENST00000639534 WWC2-AS2Q96NR7 200 aa9.22□□□□□ -0.93
CHD1L-211ENST00000639534 A0A1W2PNN7 141 aa9.21□□□□□ -0.94
CHD1L-211ENST00000639534 Q6JHZ5 121 aa9.21□□□□□ -0.94
CHD1L-211ENST00000639534 TRBV7-4A0A0J9YYF1 115 aa9.2□□□□□ -0.94
CHD1L-211ENST00000639534 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
CHD1L-211ENST00000639534 UBE2BP63146 152 aa9.19□□□□□ -0.94
CHD1L-211ENST00000639534 ATP5EP2Q5VTU8 51 aa9.19□□□□□ -0.94
CHD1L-211ENST00000639534 Q9BRP9 147 aa9.19□□□□□ -0.94
CHD1L-211ENST00000639534 UBL5Q9BZL1 73 aa9.19□□□□□ -0.94
CHD1L-211ENST00000639534 IGLV5-48A0A075B6I7 105 aa9.18□□□□□ -0.94
CHD1L-211ENST00000639534 C1orf134Q5TEV5 83 aa9.18□□□□□ -0.94
CHD1L-211ENST00000639534 H0Y9J4 135 aa9.16□□□□□ -0.94
CHD1L-211ENST00000639534 Q8N377 158 aa9.16□□□□□ -0.94
CHD1L-211ENST00000639534 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
CHD1L-211ENST00000639534 LINC01547P58512 204 aaPredicted RBP9.15□□□□□ -0.94
CHD1L-211ENST00000639534 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
CHD1L-211ENST00000639534 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
CHD1L-211ENST00000639534 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
CHD1L-211ENST00000639534 LY6G6CO95867 125 aa9.14□□□□□ -0.95
CHD1L-211ENST00000639534 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
CHD1L-211ENST00000639534 LINC00476Q8WZB0 136 aa9.14□□□□□ -0.95
CHD1L-211ENST00000639534 A0A1B0GW54 56 aa9.13□□□□□ -0.95
CHD1L-211ENST00000639534 RTL8CO15255 209 aa9.13□□□□□ -0.95
CHD1L-211ENST00000639534 PHF5AQ7RTV0 110 aaKnown RBP9.13□□□□□ -0.95
CHD1L-211ENST00000639534 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
CHD1L-211ENST00000639534 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
CHD1L-211ENST00000639534 PLECQ15149 4684 aaKnown RBP9.1□□□□□ -0.95
CHD1L-211ENST00000639534 DNAH7Q8WXX0 4024 aa9.1□□□□□ -0.95
CHD1L-211ENST00000639534 ANAPC13Q9BS18 74 aa9.1□□□□□ -0.95
CHD1L-211ENST00000639534 CSMD3Q7Z407 3707 aa9.09□□□□□ -0.95
CHD1L-211ENST00000639534 F8WEM9 126 aa9.09□□□□□ -0.95
CHD1L-211ENST00000639534 ERC2-IT1O76042 136 aa9.09□□□□□ -0.95
CHD1L-211ENST00000639534 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
CHD1L-211ENST00000639534 IGLV5-52A0A0A0MRZ9 124 aa9.08□□□□□ -0.96
CHD1L-211ENST00000639534 BCE1O60756 84 aa9.08□□□□□ -0.96
CHD1L-211ENST00000639534 TNP2Q05952 138 aa9.08□□□□□ -0.96
CHD1L-211ENST00000639534 ST20-AS1Q8NBB2 130 aa9.08□□□□□ -0.96
CHD1L-211ENST00000639534 DNHD1Q96M86 4753 aa9.07□□□□□ -0.96
CHD1L-211ENST00000639534 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
CHD1L-211ENST00000639534 UBE2AP49459 152 aa9.07□□□□□ -0.96
CHD1L-211ENST00000639534 PRKDCP78527 4128 aaKnown RBP9.06□□□□□ -0.96
CHD1L-211ENST00000639534 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
CHD1L-211ENST00000639534 PRLHP81277 87 aa9.06□□□□□ -0.96
CHD1L-211ENST00000639534 Q6ZVQ6 151 aa9.06□□□□□ -0.96
CHD1L-211ENST00000639534 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
CHD1L-211ENST00000639534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.06□□□□□ -0.96
CHD1L-211ENST00000639534 FAM236AA0A1B0GUQ0 79 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 PANO1I0J062 215 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 SPRR1BP22528 89 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 CXCL6P80162 114 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 C1orf137Q5JT78 98 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
CHD1L-211ENST00000639534 STARD9Q9P2P6 4700 aa9.03□□□□□ -0.96
CHD1L-211ENST00000639534 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
CHD1L-211ENST00000639534 IGLV8-61A0A075B6I0 122 aa9.02□□□□□ -0.97
CHD1L-211ENST00000639534 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
CHD1L-211ENST00000639534 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
CHD1L-211ENST00000639534 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
CHD1L-211ENST00000639534 HIST1H4AP62805 103 aaKnown RBP9.01□□□□□ -0.97
CHD1L-211ENST00000639534 C3orf22Q8N5N4 141 aa9.01□□□□□ -0.97
CHD1L-211ENST00000639534 Q8NBF4 154 aa9.01□□□□□ -0.97
CHD1L-211ENST00000639534 ATOX1O00244 68 aa9□□□□□ -0.97
CHD1L-211ENST00000639534 HAMPP81172 84 aa9□□□□□ -0.97
CHD1L-211ENST00000639534 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
CHD1L-211ENST00000639534 DNAH10Q8IVF4 4471 aa8.99□□□□□ -0.97
CHD1L-211ENST00000639534 NREPQ16612 68 aa8.99□□□□□ -0.97
CHD1L-211ENST00000639534 LYSTQ99698 3801 aa8.98□□□□□ -0.97
CHD1L-211ENST00000639534 SPRR4Q96PI1 79 aa8.98□□□□□ -0.97
CHD1L-211ENST00000639534 A0A1W2PNM2 257 aa8.97□□□□□ -0.97
CHD1L-211ENST00000639534 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms