RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
TARDBP-230ENST00000639083 VPS13DQ5THJ4 4388 aa6.91□□□□□ -1.3
TARDBP-230ENST00000639083 TGP01266 2768 aa6.91□□□□□ -1.3
TARDBP-230ENST00000639083 A0A096LNI7 61 aa6.9□□□□□ -1.3
TARDBP-230ENST00000639083 IGKV2-24A0A0C4DH68 120 aa6.9□□□□□ -1.3
TARDBP-230ENST00000639083 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.31
TARDBP-230ENST00000639083 ACYP1P07311 99 aa6.9□□□□□ -1.31
TARDBP-230ENST00000639083 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.31
TARDBP-230ENST00000639083 C16orf90A8MZG2 172 aa6.89□□□□□ -1.31
TARDBP-230ENST00000639083 JMJD7-PLA2G4BH0Y9G9 81 aa6.89□□□□□ -1.31
TARDBP-230ENST00000639083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
TARDBP-230ENST00000639083 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
TARDBP-230ENST00000639083 SCGB1A1P11684 91 aa6.88□□□□□ -1.31
TARDBP-230ENST00000639083 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
TARDBP-230ENST00000639083 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
TARDBP-230ENST00000639083 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
TARDBP-230ENST00000639083 SMCR5Q8TEV8 140 aa6.87□□□□□ -1.31
TARDBP-230ENST00000639083 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
TARDBP-230ENST00000639083 PRYO14603 147 aa6.86□□□□□ -1.31
TARDBP-230ENST00000639083 CHTF8P0CG12 524 aa6.86□□□□□ -1.31
TARDBP-230ENST00000639083 SPRR1AP35321 89 aa6.85□□□□□ -1.31
TARDBP-230ENST00000639083 B5MCH6 92 aa6.85□□□□□ -1.31
TARDBP-230ENST00000639083 H3BQ85 93 aa6.85□□□□□ -1.31
TARDBP-230ENST00000639083 CCKP06307 115 aa6.85□□□□□ -1.31
TARDBP-230ENST00000639083 RBM3P98179 157 aaKnown RBP6.85□□□□□ -1.31
TARDBP-230ENST00000639083 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
TARDBP-230ENST00000639083 Q6ZRX8 168 aa6.84□□□□□ -1.31
TARDBP-230ENST00000639083 SDIM1Q6ZPB5 146 aa6.84□□□□□ -1.31
TARDBP-230ENST00000639083 Q6ZR54 194 aa6.84□□□□□ -1.31
TARDBP-230ENST00000639083 Q9BRP9 147 aa6.84□□□□□ -1.31
TARDBP-230ENST00000639083 LINC00846Q9NV44 126 aa6.83□□□□□ -1.32
TARDBP-230ENST00000639083 GHRHP01286 108 aa6.83□□□□□ -1.32
TARDBP-230ENST00000639083 A0A087WTM6 91 aa6.82□□□□□ -1.32
TARDBP-230ENST00000639083 LY6G6CO95867 125 aa6.82□□□□□ -1.32
TARDBP-230ENST00000639083 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
TARDBP-230ENST00000639083 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
TARDBP-230ENST00000639083 DHRS4-AS1Q9P1J3 65 aa6.82□□□□□ -1.32
TARDBP-230ENST00000639083 DNAH2Q9P225 4427 aa6.82□□□□□ -1.32
TARDBP-230ENST00000639083 NDUFV3P56181 108 aaKnown RBP6.81□□□□□ -1.32
TARDBP-230ENST00000639083 LINC00643Q86TS7 51 aa6.81□□□□□ -1.32
TARDBP-230ENST00000639083 FUSP35637 526 aaKnown RBP eCLIP6.81□□□□□ -1.32
TARDBP-230ENST00000639083 Q6ZQT0 140 aa6.81□□□□□ -1.32
TARDBP-230ENST00000639083 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
TARDBP-230ENST00000639083 PANO1I0J062 215 aa6.8□□□□□ -1.32
TARDBP-230ENST00000639083 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
TARDBP-230ENST00000639083 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 ERC2-IT1O76042 136 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 UBE2BP63146 152 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 Q8N377 158 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 WWC2-AS2Q96NR7 200 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 KRTAP11-1Q8IUC1 163 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 ST20-AS1Q8NBB2 130 aa6.79□□□□□ -1.32
TARDBP-230ENST00000639083 LINC01547P58512 204 aaPredicted RBP6.78□□□□□ -1.32
TARDBP-230ENST00000639083 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
TARDBP-230ENST00000639083 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
TARDBP-230ENST00000639083 HECTD4Q9Y4D8 3996 aa6.78□□□□□ -1.32
TARDBP-230ENST00000639083 PKIGQ9Y2B9 76 aa6.78□□□□□ -1.32
TARDBP-230ENST00000639083 TRBV7-4A0A0J9YYF1 115 aa6.77□□□□□ -1.33
TARDBP-230ENST00000639083 Q6Q795 121 aa6.77□□□□□ -1.33
TARDBP-230ENST00000639083 TRBV7-7A0A0K0K1E9 115 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 FAM19A1Q7Z5A9 133 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
TARDBP-230ENST00000639083 PDE6GP18545 87 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 PRLHP81277 87 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 ANAPC13Q9BS18 74 aa6.76□□□□□ -1.33
TARDBP-230ENST00000639083 RTL8CO15255 209 aa6.75□□□□□ -1.33
TARDBP-230ENST00000639083 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
TARDBP-230ENST00000639083 SPACA4Q8TDM5 124 aa6.74□□□□□ -1.33
TARDBP-230ENST00000639083 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
TARDBP-230ENST00000639083 IGLV5-48A0A075B6I7 105 aa6.74□□□□□ -1.33
TARDBP-230ENST00000639083 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
TARDBP-230ENST00000639083 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
TARDBP-230ENST00000639083 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
TARDBP-230ENST00000639083 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
TARDBP-230ENST00000639083 Q6JHZ5 121 aa6.72□□□□□ -1.33
TARDBP-230ENST00000639083 TNP2Q05952 138 aa6.71□□□□□ -1.33
TARDBP-230ENST00000639083 IGLV5-52A0A0A0MRZ9 124 aa6.71□□□□□ -1.34
TARDBP-230ENST00000639083 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
TARDBP-230ENST00000639083 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
TARDBP-230ENST00000639083 DNAH17Q9UFH2 4485 aa6.69□□□□□ -1.34
TARDBP-230ENST00000639083 FAM236AA0A1B0GUQ0 79 aa6.69□□□□□ -1.34
TARDBP-230ENST00000639083 FAM236BA0A1B0GV22 79 aa6.69□□□□□ -1.34
TARDBP-230ENST00000639083 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
TARDBP-230ENST00000639083 SMIM29Q86T20 159 aa6.69□□□□□ -1.34
TARDBP-230ENST00000639083 Q6ZVQ6 151 aa6.69□□□□□ -1.34
TARDBP-230ENST00000639083 HYDINQ4G0P3 5121 aa6.68□□□□□ -1.34
TARDBP-230ENST00000639083 H0Y9J4 135 aa6.68□□□□□ -1.34
TARDBP-230ENST00000639083 UBE2AP49459 152 aa6.68□□□□□ -1.34
TARDBP-230ENST00000639083 BCE1O60756 84 aa6.67□□□□□ -1.34
TARDBP-230ENST00000639083 HAMPP81172 84 aa6.67□□□□□ -1.34
TARDBP-230ENST00000639083 C1orf137Q5JT78 98 aa6.67□□□□□ -1.34
TARDBP-230ENST00000639083 A0A087WVE0 104 aa6.66□□□□□ -1.34
TARDBP-230ENST00000639083 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
TARDBP-230ENST00000639083 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
TARDBP-230ENST00000639083 DNAH6Q9C0G6 4158 aa6.66□□□□□ -1.34
TARDBP-230ENST00000639083 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.34
TARDBP-230ENST00000639083 PLAC8Q9NZF1 115 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms