RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TRAV23DV6A0A075B6W5 121 aa10.29□□□□□ -0.76
CLN6-220ENST00000637450 JOSD1Q15040 202 aaPredicted RBP10.29□□□□□ -0.76
CLN6-220ENST00000637450 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
CLN6-220ENST00000637450 ZNF73O43830 326 aaPredicted RBP10.27□□□□□ -0.77
CLN6-220ENST00000637450 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
CLN6-220ENST00000637450 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
CLN6-220ENST00000637450 A0A0J9YXY3 114 aa10.26□□□□□ -0.77
CLN6-220ENST00000637450 NPC2P61916 151 aa10.25□□□□□ -0.77
CLN6-220ENST00000637450 KRTAP9-6A0A140TA67 174 aa10.24□□□□□ -0.77
CLN6-220ENST00000637450 LINC01547P58512 204 aaPredicted RBP10.24□□□□□ -0.77
CLN6-220ENST00000637450 C9orf153Q5TBE3 101 aa10.24□□□□□ -0.77
CLN6-220ENST00000637450 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
CLN6-220ENST00000637450 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
CLN6-220ENST00000637450 XP32Q5T750 250 aa10.23□□□□□ -0.77
CLN6-220ENST00000637450 E9PLD3 99 aa10.22□□□□□ -0.77
CLN6-220ENST00000637450 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.77
CLN6-220ENST00000637450 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
CLN6-220ENST00000637450 COLCA2A8K830 154 aa10.19□□□□□ -0.78
CLN6-220ENST00000637450 LITAFQ99732 161 aa10.18□□□□□ -0.78
CLN6-220ENST00000637450 SPRR1BP22528 89 aa10.17□□□□□ -0.78
CLN6-220ENST00000637450 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
CLN6-220ENST00000637450 SPANXCQ9NY87 97 aa10.17□□□□□ -0.78
CLN6-220ENST00000637450 OR13C6PQ8NH95 151 aa10.15□□□□□ -0.78
CLN6-220ENST00000637450 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
CLN6-220ENST00000637450 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
CLN6-220ENST00000637450 TIMM17BO60830 172 aa10.14□□□□□ -0.79
CLN6-220ENST00000637450 SLC25A34Q6PIV7 304 aa10.14□□□□□ -0.79
CLN6-220ENST00000637450 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
CLN6-220ENST00000637450 LIMD2Q9BT23 127 aa10.11□□□□□ -0.79
CLN6-220ENST00000637450 SPANXDQ9BXN6 97 aa10.11□□□□□ -0.79
CLN6-220ENST00000637450 LAMTOR3Q9UHA4 124 aa10.11□□□□□ -0.79
CLN6-220ENST00000637450 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CLN6-220ENST00000637450 LINC01545Q5VT33 79 aa10.1□□□□□ -0.79
CLN6-220ENST00000637450 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
CLN6-220ENST00000637450 ELOF1P60002 83 aaKnown RBP10.09□□□□□ -0.79
CLN6-220ENST00000637450 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
CLN6-220ENST00000637450 ZNF815PA8K554 130 aa10.08□□□□□ -0.8
CLN6-220ENST00000637450 COX7BP24311 80 aa10.08□□□□□ -0.8
CLN6-220ENST00000637450 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BKO60814 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BJP06899 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BOP23527 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BBP33778 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BDP58876 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BCP62807 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST2H2BEQ16778 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.07□□□□□ -0.8
CLN6-220ENST00000637450 PET117Q6UWS5 81 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BHQ93079 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BNQ99877 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 HIST1H2BMQ99879 126 aa10.07□□□□□ -0.8
CLN6-220ENST00000637450 C6orf99Q4VX62 202 aa10.06□□□□□ -0.8
CLN6-220ENST00000637450 TTTY13Q9BZ97 58 aa10.06□□□□□ -0.8
CLN6-220ENST00000637450 KRTAP19-2Q3LHN2 52 aa10.05□□□□□ -0.8
CLN6-220ENST00000637450 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
CLN6-220ENST00000637450 CD164Q04900 197 aa10.04□□□□□ -0.8
CLN6-220ENST00000637450 TAL2Q16559 108 aa10.04□□□□□ -0.8
CLN6-220ENST00000637450 PCOTHQ58A44 107 aa10.04□□□□□ -0.8
CLN6-220ENST00000637450 DEFB105AQ8NG35 78 aa10.03□□□□□ -0.8
CLN6-220ENST00000637450 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
CLN6-220ENST00000637450 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
CLN6-220ENST00000637450 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
CLN6-220ENST00000637450 Q1RN00 199 aa10.02□□□□□ -0.81
CLN6-220ENST00000637450 PRO1933Q9H354 126 aa10.02□□□□□ -0.81
CLN6-220ENST00000637450 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
CLN6-220ENST00000637450 C3orf79P0CE67 100 aa10□□□□□ -0.81
CLN6-220ENST00000637450 Q5XG85 94 aa9.99□□□□□ -0.81
CLN6-220ENST00000637450 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
CLN6-220ENST00000637450 H7C2G1 150 aa9.98□□□□□ -0.81
CLN6-220ENST00000637450 AKR1D1P51857 326 aa9.98□□□□□ -0.81
CLN6-220ENST00000637450 MT1HP80294 61 aa9.97□□□□□ -0.81
CLN6-220ENST00000637450 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
CLN6-220ENST00000637450 A0A1B0GWB2 263 aa9.96□□□□□ -0.82
CLN6-220ENST00000637450 IGLV5-48A0A075B6I7 105 aa9.95□□□□□ -0.82
CLN6-220ENST00000637450 IFITM1P13164 125 aa9.95□□□□□ -0.82
CLN6-220ENST00000637450 C1orf195Q5TG92 126 aa9.95□□□□□ -0.82
CLN6-220ENST00000637450 COPS9Q8WXC6 57 aa9.95□□□□□ -0.82
CLN6-220ENST00000637450 KRTDAPP60985 99 aa9.94□□□□□ -0.82
CLN6-220ENST00000637450 A6NDN8 102 aa9.93□□□□□ -0.82
CLN6-220ENST00000637450 ANKRD39Q53RE8 183 aa9.93□□□□□ -0.82
CLN6-220ENST00000637450 Q6ZVH6 145 aa9.93□□□□□ -0.82
CLN6-220ENST00000637450 A0A0G2JQZ4 141 aa9.92□□□□□ -0.82
CLN6-220ENST00000637450 COA6Q5JTJ3 125 aaKnown RBP9.92□□□□□ -0.82
CLN6-220ENST00000637450 MUSTN1Q8IVN3 82 aa9.92□□□□□ -0.82
CLN6-220ENST00000637450 CRCT1Q9UGL9 99 aa9.92□□□□□ -0.82
CLN6-220ENST00000637450 A4D1N5 150 aa9.9□□□□□ -0.82
CLN6-220ENST00000637450 C20orf202A1L168 122 aa9.89□□□□□ -0.83
CLN6-220ENST00000637450 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
CLN6-220ENST00000637450 PCP2Q8IVA1 136 aa9.87□□□□□ -0.83
CLN6-220ENST00000637450 TRAV13-2A0A0B4J235 113 aa9.86□□□□□ -0.83
CLN6-220ENST00000637450 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
CLN6-220ENST00000637450 ATOH7Q8N100 152 aa9.86□□□□□ -0.83
CLN6-220ENST00000637450 SMIM11BQ8TCY0 68 aa9.86□□□□□ -0.83
CLN6-220ENST00000637450 NHP2Q9NX24 153 aaKnown RBP9.86□□□□□ -0.83
CLN6-220ENST00000637450 TCL1BO95988 128 aa9.83□□□□□ -0.84
CLN6-220ENST00000637450 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
CLN6-220ENST00000637450 FLGP20930 4061 aaPredicted RBP9.82□□□□□ -0.84
CLN6-220ENST00000637450 KRTAP10-6P60371 365 aaPredicted RBP9.81□□□□□ -0.84
CLN6-220ENST00000637450 SNRPEP62304 92 aaKnown RBP9.78□□□□□ -0.84
CLN6-220ENST00000637450 VAMP3Q15836 100 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms