RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-215	ENST00000628867	XP32	Q5T750	250 aa		4.24	□□□□□ -1.73
SPTAN1-215	ENST00000628867	SYS1-DBNDD2	H3BUS1	97 aa		4.23	□□□□□ -1.73
SPTAN1-215	ENST00000628867		M0R378	163 aa		4.23	□□□□□ -1.73
SPTAN1-215	ENST00000628867	PCOTH	Q58A44	107 aa		4.23	□□□□□ -1.73
SPTAN1-215	ENST00000628867	LINC01545	Q5VT33	79 aa		4.23	□□□□□ -1.73
SPTAN1-215	ENST00000628867	MAP1LC3C	Q9BXW4	147 aa		4.23	□□□□□ -1.73
SPTAN1-215	ENST00000628867	IGLV9-49	A0A0B4J1Y8	123 aa		4.22	□□□□□ -1.73
SPTAN1-215	ENST00000628867	LEPROT	O15243	131 aa		4.22	□□□□□ -1.73
SPTAN1-215	ENST00000628867	PCP4	P48539	62 aa		4.22	□□□□□ -1.73
SPTAN1-215	ENST00000628867		E9PLD3	99 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867		J3QQQ9	107 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867	C3orf79	P0CE67	100 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867	SMIM13	P0DJ93	91 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867	S100A1	P23297	94 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867	HERV-K104	P63124	156 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867	GAGE2A	Q6NT46	116 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867	SSBP3-AS1	Q7Z2R9	100 aa		4.21	□□□□□ -1.74
SPTAN1-215	ENST00000628867		A0A0U1RRA0	63 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	NMU	P48645	174 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	LINC00158	P58513	81 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	HERVK_113	P61574	105 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	RPS29	P62273	56 aa	Known RBP	4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	S100A12	P80511	92 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	MOBP	Q13875	183 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867		Q8N377	158 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	MIR7-3HG	Q8N6C7	128 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	SMCR5	Q8TEV8	140 aa		4.2	□□□□□ -1.74
SPTAN1-215	ENST00000628867	MYMX	A0A1B0GTQ4	84 aa		4.19	□□□□□ -1.74
SPTAN1-215	ENST00000628867	ETDC	A0A1B0GVM5	59 aa		4.19	□□□□□ -1.74
SPTAN1-215	ENST00000628867	MEIG1	Q5JSS6	88 aa		4.19	□□□□□ -1.74
SPTAN1-215	ENST00000628867		A0A0J9YXY3	114 aa		4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	C9orf92	A6NGG3	77 aa		4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	NCR3	O14931	201 aa		4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	LGALS3	P17931	250 aa	Known RBP	4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	SOSTDC1	Q6X4U4	206 aa		4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	HIST3H2BB	Q8N257	126 aa		4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	LITAF	Q99732	161 aa		4.18	□□□□□ -1.74
SPTAN1-215	ENST00000628867	LOC107984156	A0A0G2JMH3	177 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	KRTDAP	P60985	99 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	KRTAP19-2	Q3LHN2	52 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	C9orf153	Q5TBE3	101 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	ARL17A	Q8IVW1	177 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	BOD1L2	Q8IYS8	172 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	HIST1H2BL	Q99880	126 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	TTTY13	Q9BZ97	58 aa		4.17	□□□□□ -1.74
SPTAN1-215	ENST00000628867	LINC00587	B1AMM8	73 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867		B5MCH6	92 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	PRY	O14603	147 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	SPRR1A	P35321	89 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	ADAMTSL4-AS1	Q5T5F5	129 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867		Q6Q795	121 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	ATOH7	Q8N100	152 aa		4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.15	□□□□□ -1.75
SPTAN1-215	ENST00000628867	TRBV10-3	A0A0K0K1G6	114 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	TRBV10-2	A0A0K0K1G8	114 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	C20orf202	A1L168	122 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	ZNF815P	A8K554	130 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	TIMM17B	O60830	172 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	NDUFC2	O95298	119 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	NPC2	P61916	151 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	LIMD2	Q9BT23	127 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	KCNQ1DN	Q9H478	68 aa		4.14	□□□□□ -1.75
SPTAN1-215	ENST00000628867	IGLV6-57	P01721	117 aa		4.13	□□□□□ -1.75
SPTAN1-215	ENST00000628867	LINC00483	Q53H64	154 aa		4.13	□□□□□ -1.75
SPTAN1-215	ENST00000628867	MIEN1	Q9BRT3	115 aa		4.13	□□□□□ -1.75
SPTAN1-215	ENST00000628867	CFC1	P0CG37	223 aa		4.12	□□□□□ -1.75
SPTAN1-215	ENST00000628867	HRCT1	Q6UXD1	115 aa		4.12	□□□□□ -1.75
SPTAN1-215	ENST00000628867	SPANXD	Q9BXN6	97 aa		4.12	□□□□□ -1.75
SPTAN1-215	ENST00000628867	SPANXC	Q9NY87	97 aa		4.12	□□□□□ -1.75
SPTAN1-215	ENST00000628867	C5orf52	A6NGY3	159 aa		4.11	□□□□□ -1.75
SPTAN1-215	ENST00000628867	S100A2	P29034	98 aa		4.11	□□□□□ -1.75
SPTAN1-215	ENST00000628867	DDT	P30046	118 aa		4.11	□□□□□ -1.75
SPTAN1-215	ENST00000628867	PCP2	Q8IVA1	136 aa		4.11	□□□□□ -1.75
SPTAN1-215	ENST00000628867	LINC00308	Q8TCZ7	52 aa		4.11	□□□□□ -1.75
SPTAN1-215	ENST00000628867	S100A6	P06703	90 aa		4.1	□□□□□ -1.75
SPTAN1-215	ENST00000628867	AKR1D1	P51857	326 aa		4.1	□□□□□ -1.75
SPTAN1-215	ENST00000628867	SNRPE	P62304	92 aa	Known RBP	4.1	□□□□□ -1.75
SPTAN1-215	ENST00000628867	TRAV23DV6	A0A075B6W5	121 aa		4.09	□□□□□ -1.75
SPTAN1-215	ENST00000628867	JOSD1	Q15040	202 aa	Predicted RBP	4.09	□□□□□ -1.75
SPTAN1-215	ENST00000628867		Q6ZRX8	168 aa		4.09	□□□□□ -1.75
SPTAN1-215	ENST00000628867		Q9BRP9	147 aa		4.09	□□□□□ -1.75
SPTAN1-215	ENST00000628867	ERC2-IT1	O76042	136 aa		4.08	□□□□□ -1.76
SPTAN1-215	ENST00000628867	S100A7L2	Q5SY68	101 aa		4.08	□□□□□ -1.76
SPTAN1-215	ENST00000628867	SCGB1D4	Q6XE38	83 aa		4.08	□□□□□ -1.76
SPTAN1-215	ENST00000628867	ZNF73	O43830	326 aa	Predicted RBP	4.07	□□□□□ -1.76
SPTAN1-215	ENST00000628867	SLC25A34	Q6PIV7	304 aa		4.07	□□□□□ -1.76
SPTAN1-215	ENST00000628867	LINC00846	Q9NV44	126 aa		4.07	□□□□□ -1.76
SPTAN1-215	ENST00000628867	TRIAP1	O43715	76 aa		4.06	□□□□□ -1.76
SPTAN1-215	ENST00000628867	HINT1	P49773	126 aa	Predicted RBP	4.06	□□□□□ -1.76
SPTAN1-215	ENST00000628867	HSBP1L1	C9JCN9	74 aa		4.05	□□□□□ -1.76
SPTAN1-215	ENST00000628867	IFITM1	P13164	125 aa		4.05	□□□□□ -1.76
SPTAN1-215	ENST00000628867	RPL37	P61927	97 aa	Known RBP	4.05	□□□□□ -1.76
SPTAN1-215	ENST00000628867		Q6ZVH6	145 aa		4.05	□□□□□ -1.76
SPTAN1-215	ENST00000628867	ELOF1	P60002	83 aa	Known RBP	4.04	□□□□□ -1.76
SPTAN1-215	ENST00000628867	MUSTN1	Q8IVN3	82 aa		4.04	□□□□□ -1.76
SPTAN1-215	ENST00000628867	LAMTOR3	Q9UHA4	124 aa		4.04	□□□□□ -1.76
SPTAN1-215	ENST00000628867	COX8A	P10176	69 aa		4.03	□□□□□ -1.76
SPTAN1-215	ENST00000628867	C6orf99	Q4VX62	202 aa		4.03	□□□□□ -1.76
SPTAN1-215	ENST00000628867	ATP11AUN	Q6ZP68	121 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms