RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 WWC2-AS2Q96NR7 200 aa10.48□□□□□ -0.73
LDB3-208ENST00000623007 C14orf132Q9NPU4 83 aa10.48□□□□□ -0.73
LDB3-208ENST00000623007 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
LDB3-208ENST00000623007 CCKP06307 115 aa10.47□□□□□ -0.73
LDB3-208ENST00000623007 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
LDB3-208ENST00000623007 A0A096LNI7 61 aa10.47□□□□□ -0.73
LDB3-208ENST00000623007 SDIM1Q6ZPB5 146 aa10.47□□□□□ -0.73
LDB3-208ENST00000623007 Q6ZR54 194 aa10.47□□□□□ -0.73
LDB3-208ENST00000623007 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
LDB3-208ENST00000623007 LOC110117498A0A087WWA1 95 aa10.46□□□□□ -0.74
LDB3-208ENST00000623007 PCP4P48539 62 aa10.46□□□□□ -0.74
LDB3-208ENST00000623007 Q6Q795 121 aa10.46□□□□□ -0.74
LDB3-208ENST00000623007 DSCR8Q96T75 97 aa10.46□□□□□ -0.74
LDB3-208ENST00000623007 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
LDB3-208ENST00000623007 FAM168BA1KXE4 195 aa10.45□□□□□ -0.74
LDB3-208ENST00000623007 KRTAP4-16G5E9R7 235 aaPredicted RBP10.45□□□□□ -0.74
LDB3-208ENST00000623007 PRKDCP78527 4128 aaKnown RBP10.45□□□□□ -0.74
LDB3-208ENST00000623007 B5MCH6 92 aa10.44□□□□□ -0.74
LDB3-208ENST00000623007 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
LDB3-208ENST00000623007 IMUPQ9GZP8 106 aa10.44□□□□□ -0.74
LDB3-208ENST00000623007 TGP01266 2768 aa10.44□□□□□ -0.74
LDB3-208ENST00000623007 MT-ATP8P03928 68 aa10.43□□□□□ -0.74
LDB3-208ENST00000623007 DYNC2H1Q8NCM8 4307 aaKnown RBP10.43□□□□□ -0.74
LDB3-208ENST00000623007 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
LDB3-208ENST00000623007 RPL37AP8A6NKH3 93 aa10.42□□□□□ -0.74
LDB3-208ENST00000623007 KRTAP7-1Q8IUC3 87 aa10.42□□□□□ -0.74
LDB3-208ENST00000623007 A0A087WTM6 91 aa10.41□□□□□ -0.74
LDB3-208ENST00000623007 NDUFV3P56181 108 aaKnown RBP10.41□□□□□ -0.74
LDB3-208ENST00000623007 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
LDB3-208ENST00000623007 C3orf84H3BNL1 204 aa10.4□□□□□ -0.74
LDB3-208ENST00000623007 M0R2N4 97 aa10.39□□□□□ -0.75
LDB3-208ENST00000623007 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
LDB3-208ENST00000623007 H0Y9J4 135 aa10.38□□□□□ -0.75
LDB3-208ENST00000623007 Q6ZQT0 140 aa10.38□□□□□ -0.75
LDB3-208ENST00000623007 A0A1W2PNN7 141 aa10.37□□□□□ -0.75
LDB3-208ENST00000623007 ATP5EP2Q5VTU8 51 aa10.37□□□□□ -0.75
LDB3-208ENST00000623007 DNAH1Q9P2D7 4330 aa10.36□□□□□ -0.75
LDB3-208ENST00000623007 IGLV5-48A0A075B6I7 105 aa10.35□□□□□ -0.75
LDB3-208ENST00000623007 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
LDB3-208ENST00000623007 A0A1B0GW54 56 aa10.35□□□□□ -0.75
LDB3-208ENST00000623007 UBE2BP63146 152 aa10.35□□□□□ -0.75
LDB3-208ENST00000623007 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
LDB3-208ENST00000623007 LY6G6CO95867 125 aa10.34□□□□□ -0.75
LDB3-208ENST00000623007 LINC00476Q8WZB0 136 aa10.34□□□□□ -0.75
LDB3-208ENST00000623007 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
LDB3-208ENST00000623007 Q9BRP9 147 aa10.34□□□□□ -0.75
LDB3-208ENST00000623007 Q6JHZ5 121 aa10.33□□□□□ -0.76
LDB3-208ENST00000623007 LINC00846Q9NV44 126 aa10.32□□□□□ -0.76
LDB3-208ENST00000623007 FAM19A1Q7Z5A9 133 aa10.31□□□□□ -0.76
LDB3-208ENST00000623007 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
LDB3-208ENST00000623007 RTL8CO15255 209 aa10.31□□□□□ -0.76
LDB3-208ENST00000623007 SMCR5Q8TEV8 140 aa10.31□□□□□ -0.76
LDB3-208ENST00000623007 Q8N377 158 aa10.3□□□□□ -0.76
LDB3-208ENST00000623007 DPH3Q96FX2 82 aa10.3□□□□□ -0.76
LDB3-208ENST00000623007 A0A1B0GV72 72 aa10.29□□□□□ -0.76
LDB3-208ENST00000623007 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
LDB3-208ENST00000623007 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
LDB3-208ENST00000623007 LINC01547P58512 204 aaPredicted RBP10.28□□□□□ -0.76
LDB3-208ENST00000623007 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
LDB3-208ENST00000623007 DEFB105AQ8NG35 78 aa10.27□□□□□ -0.77
LDB3-208ENST00000623007 DNAH7Q8WXX0 4024 aa10.26□□□□□ -0.77
LDB3-208ENST00000623007 IGLV5-52A0A0A0MRZ9 124 aa10.26□□□□□ -0.77
LDB3-208ENST00000623007 F8WEM9 126 aa10.26□□□□□ -0.77
LDB3-208ENST00000623007 BCE1O60756 84 aa10.25□□□□□ -0.77
LDB3-208ENST00000623007 FUSP35637 526 aaKnown RBP eCLIP10.24□□□□□ -0.77
LDB3-208ENST00000623007 UBE2AP49459 152 aa10.23□□□□□ -0.77
LDB3-208ENST00000623007 TNP2Q05952 138 aa10.22□□□□□ -0.77
LDB3-208ENST00000623007 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
LDB3-208ENST00000623007 HIGD2AQ9BW72 106 aa10.21□□□□□ -0.78
LDB3-208ENST00000623007 ERC2-IT1O76042 136 aa10.2□□□□□ -0.78
LDB3-208ENST00000623007 SPRR1BP22528 89 aa10.2□□□□□ -0.78
LDB3-208ENST00000623007 CXCL6P80162 114 aa10.2□□□□□ -0.78
LDB3-208ENST00000623007 PRLHP81277 87 aa10.2□□□□□ -0.78
LDB3-208ENST00000623007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
LDB3-208ENST00000623007 ST20-AS1Q8NBB2 130 aa10.19□□□□□ -0.78
LDB3-208ENST00000623007 C1orf137Q5JT78 98 aa10.18□□□□□ -0.78
LDB3-208ENST00000623007 PLECQ15149 4684 aaKnown RBP10.18□□□□□ -0.78
LDB3-208ENST00000623007 Q6ZVQ6 151 aa10.18□□□□□ -0.78
LDB3-208ENST00000623007 ANAPC13Q9BS18 74 aa10.18□□□□□ -0.78
LDB3-208ENST00000623007 IGLV8-61A0A075B6I0 122 aa10.17□□□□□ -0.78
LDB3-208ENST00000623007 LYSTQ99698 3801 aa10.17□□□□□ -0.78
LDB3-208ENST00000623007 PANO1I0J062 215 aa10.16□□□□□ -0.78
LDB3-208ENST00000623007 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
LDB3-208ENST00000623007 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
LDB3-208ENST00000623007 STARD9Q9P2P6 4700 aa10.15□□□□□ -0.78
LDB3-208ENST00000623007 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.79
LDB3-208ENST00000623007 Q8NBF4 154 aa10.15□□□□□ -0.79
LDB3-208ENST00000623007 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
LDB3-208ENST00000623007 IGKV3D-7A0A0C4DH55 119 aa10.14□□□□□ -0.79
LDB3-208ENST00000623007 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
LDB3-208ENST00000623007 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
LDB3-208ENST00000623007 FAM236AA0A1B0GUQ0 79 aa10.13□□□□□ -0.79
LDB3-208ENST00000623007 FAM236BA0A1B0GV22 79 aa10.13□□□□□ -0.79
LDB3-208ENST00000623007 NREPQ16612 68 aa10.12□□□□□ -0.79
LDB3-208ENST00000623007 ATOX1O00244 68 aa10.12□□□□□ -0.79
LDB3-208ENST00000623007 HAMPP81172 84 aa10.12□□□□□ -0.79
LDB3-208ENST00000623007 KRTAP11-1Q8IUC1 163 aa10.12□□□□□ -0.79
LDB3-208ENST00000623007 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
LDB3-208ENST00000623007 HIST1H4AP62805 103 aaKnown RBP10.1□□□□□ -0.79
LDB3-208ENST00000623007 RPL37AP61513 92 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms