RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ORMDL1Q9P0S3 153 aa13.67□□□□□ -0.22
SPAST-204ENST00000621856 IGLV1-50A0A075B6I6 118 aa13.67□□□□□ -0.22
SPAST-204ENST00000621856 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
SPAST-204ENST00000621856 A0A1W2PNN7 141 aa13.66□□□□□ -0.22
SPAST-204ENST00000621856 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
SPAST-204ENST00000621856 PRYO14603 147 aa13.65□□□□□ -0.22
SPAST-204ENST00000621856 DNAH6Q9C0G6 4158 aa13.64□□□□□ -0.23
SPAST-204ENST00000621856 KMT2AQ03164 3969 aa13.63□□□□□ -0.23
SPAST-204ENST00000621856 RTL8CO15255 209 aa13.63□□□□□ -0.23
SPAST-204ENST00000621856 LINC00474Q9P2X8 69 aa13.63□□□□□ -0.23
SPAST-204ENST00000621856 FUSP35637 526 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPAST-204ENST00000621856 LINC00528Q8N1L1 170 aa13.61□□□□□ -0.23
SPAST-204ENST00000621856 ETDCA0A1B0GVM5 59 aa13.59□□□□□ -0.23
SPAST-204ENST00000621856 TNP2Q05952 138 aa13.59□□□□□ -0.23
SPAST-204ENST00000621856 DPH3Q96FX2 82 aa13.59□□□□□ -0.23
SPAST-204ENST00000621856 DNAH2Q9P225 4427 aa13.58□□□□□ -0.23
SPAST-204ENST00000621856 IGLV5-52A0A0A0MRZ9 124 aa13.58□□□□□ -0.24
SPAST-204ENST00000621856 Q6ZQY7 126 aa13.58□□□□□ -0.24
SPAST-204ENST00000621856 TMEM256-PLSCR3K7ERE1 68 aa13.56□□□□□ -0.24
SPAST-204ENST00000621856 SPRR1AP35321 89 aa13.56□□□□□ -0.24
SPAST-204ENST00000621856 PANO1I0J062 215 aa13.56□□□□□ -0.24
SPAST-204ENST00000621856 REG3GQ6UW15 175 aa13.56□□□□□ -0.24
SPAST-204ENST00000621856 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.55□□□□□ -0.24
SPAST-204ENST00000621856 PHF5AQ7RTV0 110 aaKnown RBP13.55□□□□□ -0.24
SPAST-204ENST00000621856 VPS25Q9BRG1 176 aa13.55□□□□□ -0.24
SPAST-204ENST00000621856 B5MCH6 92 aa13.54□□□□□ -0.24
SPAST-204ENST00000621856 KRTAP4-16G5E9R7 235 aaPredicted RBP13.54□□□□□ -0.24
SPAST-204ENST00000621856 SPACA4Q8TDM5 124 aa13.53□□□□□ -0.24
SPAST-204ENST00000621856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.53□□□□□ -0.24
SPAST-204ENST00000621856 INAFM2P0DMQ5 153 aa13.53□□□□□ -0.24
SPAST-204ENST00000621856 UBE2BP63146 152 aa13.53□□□□□ -0.24
SPAST-204ENST00000621856 Q6ZRX8 168 aa13.53□□□□□ -0.24
SPAST-204ENST00000621856 DNAH17Q9UFH2 4485 aa13.51□□□□□ -0.25
SPAST-204ENST00000621856 H3BQ85 93 aa13.51□□□□□ -0.25
SPAST-204ENST00000621856 DHRS4-AS1Q9P1J3 65 aa13.5□□□□□ -0.25
SPAST-204ENST00000621856 A0A1B0GV72 72 aa13.49□□□□□ -0.25
SPAST-204ENST00000621856 GHRHP01286 108 aa13.49□□□□□ -0.25
SPAST-204ENST00000621856 OBSCN-AS1Q96MR7 158 aa13.47□□□□□ -0.25
SPAST-204ENST00000621856 Q9BRP9 147 aa13.47□□□□□ -0.25
SPAST-204ENST00000621856 JMJD7-PLA2G4BH0Y9G9 81 aa13.45□□□□□ -0.26
SPAST-204ENST00000621856 FAM19A1Q7Z5A9 133 aa13.45□□□□□ -0.26
SPAST-204ENST00000621856 C14orf132Q9NPU4 83 aa13.45□□□□□ -0.26
SPAST-204ENST00000621856 LAMTOR3Q9UHA4 124 aa13.45□□□□□ -0.26
SPAST-204ENST00000621856 KRTAP11-1Q8IUC1 163 aa13.44□□□□□ -0.26
SPAST-204ENST00000621856 LCE6AA0A183 80 aa13.42□□□□□ -0.26
SPAST-204ENST00000621856 EPM2AB3EWF7 344 aa13.42□□□□□ -0.26
SPAST-204ENST00000621856 KRTAP10-2P60368 255 aa13.42□□□□□ -0.26
SPAST-204ENST00000621856 PRLHP81277 87 aa13.4□□□□□ -0.26
SPAST-204ENST00000621856 DEFB105AQ8NG35 78 aa13.4□□□□□ -0.26
SPAST-204ENST00000621856 HECTD4Q9Y4D8 3996 aa13.4□□□□□ -0.27
SPAST-204ENST00000621856 GAGE2AQ6NT46 116 aa13.39□□□□□ -0.27
SPAST-204ENST00000621856 PLAC8Q9NZF1 115 aa13.38□□□□□ -0.27
SPAST-204ENST00000621856 FRAS1Q86XX4 4008 aa13.37□□□□□ -0.27
SPAST-204ENST00000621856 FAM240AA0A1B0GVK7 77 aa13.37□□□□□ -0.27
SPAST-204ENST00000621856 ERC2-IT1O76042 136 aa13.37□□□□□ -0.27
SPAST-204ENST00000621856 RBM3P98179 157 aaKnown RBP13.37□□□□□ -0.27
SPAST-204ENST00000621856 SMCR5Q8TEV8 140 aa13.37□□□□□ -0.27
SPAST-204ENST00000621856 CDIP1Q9H305 208 aa13.37□□□□□ -0.27
SPAST-204ENST00000621856 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
SPAST-204ENST00000621856 ST20-AS1Q8NBB2 130 aa13.36□□□□□ -0.27
SPAST-204ENST00000621856 HIGD2AQ9BW72 106 aa13.35□□□□□ -0.27
SPAST-204ENST00000621856 HYDINQ4G0P3 5121 aa13.35□□□□□ -0.27
SPAST-204ENST00000621856 ACYP1P07311 99 aa13.34□□□□□ -0.27
SPAST-204ENST00000621856 UBE2AP49459 152 aa13.34□□□□□ -0.27
SPAST-204ENST00000621856 Q8N377 158 aa13.34□□□□□ -0.27
SPAST-204ENST00000621856 BCE1O60756 84 aa13.33□□□□□ -0.28
SPAST-204ENST00000621856 LINC01547P58512 204 aaPredicted RBP13.33□□□□□ -0.28
SPAST-204ENST00000621856 H0Y9J4 135 aa13.31□□□□□ -0.28
SPAST-204ENST00000621856 CCKP06307 115 aa13.31□□□□□ -0.28
SPAST-204ENST00000621856 DSCR8Q96T75 97 aa13.31□□□□□ -0.28
SPAST-204ENST00000621856 IGLV5-48A0A075B6I7 105 aa13.3□□□□□ -0.28
SPAST-204ENST00000621856 SACSQ9NZJ4 4579 aa13.29□□□□□ -0.28
SPAST-204ENST00000621856 DNAH11Q96DT5 4516 aa13.28□□□□□ -0.28
SPAST-204ENST00000621856 LOC110117498A0A087WWA1 95 aa13.27□□□□□ -0.28
SPAST-204ENST00000621856 SIGMAR1Q99720 223 aa13.27□□□□□ -0.28
SPAST-204ENST00000621856 Q6ZQT0 140 aa13.26□□□□□ -0.29
SPAST-204ENST00000621856 FAM30AQ9NZY2 134 aa13.26□□□□□ -0.29
SPAST-204ENST00000621856 KRTAP10-1P60331 282 aa13.25□□□□□ -0.29
SPAST-204ENST00000621856 PDE6GP18545 87 aa13.25□□□□□ -0.29
SPAST-204ENST00000621856 XGP55808 180 aa13.25□□□□□ -0.29
SPAST-204ENST00000621856 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
SPAST-204ENST00000621856 C3orf22Q8N5N4 141 aa13.25□□□□□ -0.29
SPAST-204ENST00000621856 PSORS1C2Q9UIG4 136 aa13.25□□□□□ -0.29
SPAST-204ENST00000621856 FAT2Q9NYQ8 4349 aa13.24□□□□□ -0.29
SPAST-204ENST00000621856 TRBV7-4A0A0J9YYF1 115 aa13.22□□□□□ -0.29
SPAST-204ENST00000621856 KRTAP13-1Q8IUC0 172 aa13.22□□□□□ -0.29
SPAST-204ENST00000621856 CIRBP-AS1Q8TBR5 109 aa13.22□□□□□ -0.29
SPAST-204ENST00000621856 DNAH5Q8TE73 4624 aa13.21□□□□□ -0.3
SPAST-204ENST00000621856 MT-ATP8P03928 68 aa13.2□□□□□ -0.3
SPAST-204ENST00000621856 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
SPAST-204ENST00000621856 Q6ZSA8 131 aa13.19□□□□□ -0.3
SPAST-204ENST00000621856 SCXQ7RTU7 201 aa13.19□□□□□ -0.3
SPAST-204ENST00000621856 PKD1P98161 4303 aa13.18□□□□□ -0.3
SPAST-204ENST00000621856 LINC00846Q9NV44 126 aa13.18□□□□□ -0.3
SPAST-204ENST00000621856 F8WEM9 126 aa13.16□□□□□ -0.3
SPAST-204ENST00000621856 DNAH8Q96JB1 4490 aa13.16□□□□□ -0.3
SPAST-204ENST00000621856 SMIM29Q86T20 159 aa13.16□□□□□ -0.3
SPAST-204ENST00000621856 C21orf62-AS1Q17RA5 79 aa13.15□□□□□ -0.3
SPAST-204ENST00000621856 HAMPP81172 84 aa13.14□□□□□ -0.31
SPAST-204ENST00000621856 LINC00643Q86TS7 51 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms