RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 Q6ZQY7 126 aa8.14□□□□□ -1.11
CIITA-212ENST00000618207 SERP1Q9Y6X1 66 aa8.14□□□□□ -1.11
CIITA-212ENST00000618207 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
CIITA-212ENST00000618207 ZNF73O43830 326 aaPredicted RBP8.13□□□□□ -1.11
CIITA-212ENST00000618207 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
CIITA-212ENST00000618207 MUC7Q8TAX7 377 aa8.12□□□□□ -1.11
CIITA-212ENST00000618207 PMAIP1Q13794 54 aa8.12□□□□□ -1.11
CIITA-212ENST00000618207 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
CIITA-212ENST00000618207 LAMTOR3Q9UHA4 124 aa8.12□□□□□ -1.11
CIITA-212ENST00000618207 FAM168BA1KXE4 195 aa8.11□□□□□ -1.11
CIITA-212ENST00000618207 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
CIITA-212ENST00000618207 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
CIITA-212ENST00000618207 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
CIITA-212ENST00000618207 UBE2DNLQ8IWF7 75 aa8.11□□□□□ -1.11
CIITA-212ENST00000618207 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
CIITA-212ENST00000618207 KRTAP1-5Q9BYS1 174 aa8.1□□□□□ -1.11
CIITA-212ENST00000618207 LINC00846Q9NV44 126 aa8.1□□□□□ -1.11
CIITA-212ENST00000618207 M0R378 163 aa8.1□□□□□ -1.11
CIITA-212ENST00000618207 CD164Q04900 197 aa8.1□□□□□ -1.11
CIITA-212ENST00000618207 NKAPP1Q8N9T2 125 aa8.1□□□□□ -1.11
CIITA-212ENST00000618207 COX7BP24311 80 aa8.09□□□□□ -1.11
CIITA-212ENST00000618207 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
CIITA-212ENST00000618207 IGKV3D-7A0A0C4DH55 119 aa8.08□□□□□ -1.12
CIITA-212ENST00000618207 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
CIITA-212ENST00000618207 OBSCN-AS1Q96MR7 158 aa8.08□□□□□ -1.12
CIITA-212ENST00000618207 DNAH10Q8IVF4 4471 aa8.07□□□□□ -1.12
CIITA-212ENST00000618207 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.07□□□□□ -1.12
CIITA-212ENST00000618207 PSCAO43653 123 aa8.07□□□□□ -1.12
CIITA-212ENST00000618207 JMJD7-PLA2G4BH0Y9G9 81 aa8.06□□□□□ -1.12
CIITA-212ENST00000618207 C7orf33Q8WU49 177 aa8.06□□□□□ -1.12
CIITA-212ENST00000618207 RMI2Q96E14 147 aa8.05□□□□□ -1.12
CIITA-212ENST00000618207 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
CIITA-212ENST00000618207 M0R2N4 97 aa8.05□□□□□ -1.12
CIITA-212ENST00000618207 ELOF1P60002 83 aaKnown RBP8.05□□□□□ -1.12
CIITA-212ENST00000618207 DEFB105AQ8NG35 78 aa8.05□□□□□ -1.12
CIITA-212ENST00000618207 DNAH7Q8WXX0 4024 aa8.04□□□□□ -1.12
CIITA-212ENST00000618207 RBM3P98179 157 aaKnown RBP8.04□□□□□ -1.12
CIITA-212ENST00000618207 CCKP06307 115 aa8.04□□□□□ -1.12
CIITA-212ENST00000618207 DNAH9Q9NYC9 4486 aa8.04□□□□□ -1.12
CIITA-212ENST00000618207 B9D2Q9BPU9 175 aa8.02□□□□□ -1.13
CIITA-212ENST00000618207 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
CIITA-212ENST00000618207 A0A087WVE0 104 aa8.01□□□□□ -1.13
CIITA-212ENST00000618207 LINC00528Q8N1L1 170 aa8.01□□□□□ -1.13
CIITA-212ENST00000618207 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
CIITA-212ENST00000618207 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.98□□□□□ -1.13
CIITA-212ENST00000618207 Q6ZQT0 140 aa7.98□□□□□ -1.13
CIITA-212ENST00000618207 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
CIITA-212ENST00000618207 TGP01266 2768 aa7.97□□□□□ -1.13
CIITA-212ENST00000618207 A0A096LNI7 61 aa7.97□□□□□ -1.13
CIITA-212ENST00000618207 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
CIITA-212ENST00000618207 PRR15Q8IV56 129 aa7.96□□□□□ -1.13
CIITA-212ENST00000618207 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
CIITA-212ENST00000618207 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
CIITA-212ENST00000618207 MRPL55Q7Z7F7 128 aaKnown RBP7.96□□□□□ -1.14
CIITA-212ENST00000618207 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.14
CIITA-212ENST00000618207 DNAH1Q9P2D7 4330 aa7.96□□□□□ -1.14
CIITA-212ENST00000618207 MEGF8Q7Z7M0 2845 aa7.95□□□□□ -1.14
CIITA-212ENST00000618207 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
CIITA-212ENST00000618207 PLECQ15149 4684 aaKnown RBP7.95□□□□□ -1.14
CIITA-212ENST00000618207 PRKDCP78527 4128 aaKnown RBP7.94□□□□□ -1.14
CIITA-212ENST00000618207 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
CIITA-212ENST00000618207 H7BZZ5 65 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 HAMPP81172 84 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 Q6JHZ5 121 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 ST20-AS1Q8NBB2 130 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 UBL5Q9BZL1 73 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 FUSP35637 526 aaKnown RBP eCLIP7.94□□□□□ -1.14
CIITA-212ENST00000618207 C20orf197Q8N268 126 aa7.94□□□□□ -1.14
CIITA-212ENST00000618207 UBE2BP63146 152 aa7.93□□□□□ -1.14
CIITA-212ENST00000618207 Q9BRP9 147 aa7.93□□□□□ -1.14
CIITA-212ENST00000618207 A0A1W2PNN7 141 aa7.93□□□□□ -1.14
CIITA-212ENST00000618207 SCXQ7RTU7 201 aa7.92□□□□□ -1.14
CIITA-212ENST00000618207 ERC2-IT1O76042 136 aa7.92□□□□□ -1.14
CIITA-212ENST00000618207 Q6ZRX8 168 aa7.92□□□□□ -1.14
CIITA-212ENST00000618207 Q8N377 158 aa7.91□□□□□ -1.14
CIITA-212ENST00000618207 LOC110117498A0A087WWA1 95 aa7.9□□□□□ -1.14
CIITA-212ENST00000618207 GHRHP01286 108 aa7.9□□□□□ -1.14
CIITA-212ENST00000618207 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
CIITA-212ENST00000618207 DNHD1Q96M86 4753 aa7.9□□□□□ -1.14
CIITA-212ENST00000618207 NBDYA0A0U1RRE5 68 aa7.9□□□□□ -1.15
CIITA-212ENST00000618207 PRLHP81277 87 aa7.9□□□□□ -1.15
CIITA-212ENST00000618207 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.15
CIITA-212ENST00000618207 NUPR2A6NF83 97 aa7.89□□□□□ -1.15
CIITA-212ENST00000618207 TRBV7-4A0A0J9YYF1 115 aa7.89□□□□□ -1.15
CIITA-212ENST00000618207 C3orf84H3BNL1 204 aa7.89□□□□□ -1.15
CIITA-212ENST00000618207 PRYO14603 147 aa7.89□□□□□ -1.15
CIITA-212ENST00000618207 Q6ZVQ6 151 aa7.89□□□□□ -1.15
CIITA-212ENST00000618207 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
CIITA-212ENST00000618207 C16orf90A8MZG2 172 aa7.88□□□□□ -1.15
CIITA-212ENST00000618207 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
CIITA-212ENST00000618207 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
CIITA-212ENST00000618207 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
CIITA-212ENST00000618207 HIGD2AQ9BW72 106 aa7.87□□□□□ -1.15
CIITA-212ENST00000618207 H3BQ85 93 aa7.86□□□□□ -1.15
CIITA-212ENST00000618207 DHRS4-AS1Q9P1J3 65 aa7.86□□□□□ -1.15
CIITA-212ENST00000618207 A0A0G2JQZ4 141 aa7.86□□□□□ -1.15
CIITA-212ENST00000618207 SPRR1AP35321 89 aa7.86□□□□□ -1.15
CIITA-212ENST00000618207 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
CIITA-212ENST00000618207 LINC01547P58512 204 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms