RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PKIGQ9Y2B9 76 aa5.73□□□□□ -1.49
CCDC47-207ENST00000612558 DNAH2Q9P225 4427 aa5.73□□□□□ -1.49
CCDC47-207ENST00000612558 A0A087WTM6 91 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 C9JAW5 83 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 C9orf163Q8N9P6 203 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 CBY1Q9Y3M2 126 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 IGLV5-37A0A075B6J1 123 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 TRAV23DV6A0A075B6W5 121 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 SLC25A20O43772 301 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 TRACP01848 142 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 C6orf99Q4VX62 202 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 FAM218AQ96MZ4 157 aa5.72□□□□□ -1.49
CCDC47-207ENST00000612558 M0QXV9 152 aa5.71□□□□□ -1.5
CCDC47-207ENST00000612558 A0A087WYN8 130 aa5.7□□□□□ -1.5
CCDC47-207ENST00000612558 A0A096LNI7 61 aa5.7□□□□□ -1.5
CCDC47-207ENST00000612558 FAM168BA1KXE4 195 aa5.7□□□□□ -1.5
CCDC47-207ENST00000612558 C7orf33Q8WU49 177 aa5.7□□□□□ -1.5
CCDC47-207ENST00000612558 LINC01600Q96MT4 127 aa5.7□□□□□ -1.5
CCDC47-207ENST00000612558 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
CCDC47-207ENST00000612558 DNAH17Q9UFH2 4485 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 A0A1B0GX51 115 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 H3BT86 120 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 ZNF73O43830 326 aaPredicted RBP5.69□□□□□ -1.5
CCDC47-207ENST00000612558 ETDBQ3ZM63 59 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 SDIM1Q6ZPB5 146 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 ANKRD29Q8N6D5 301 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 DIRC1Q969H9 104 aa5.69□□□□□ -1.5
CCDC47-207ENST00000612558 IGKV2-24A0A0C4DH68 120 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 TRBV7-6A0A0J9YX20 115 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 SNCGO76070 127 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 DNAL4O96015 105 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
CCDC47-207ENST00000612558 KRTAP7-1Q8IUC3 87 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 LINC00474Q9P2X8 69 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
CCDC47-207ENST00000612558 MRPL55Q7Z7F7 128 aaKnown RBP5.67□□□□□ -1.5
CCDC47-207ENST00000612558 FRAS1Q86XX4 4008 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 BAALC-AS2P0C853 105 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 TEN1Q86WV5 123 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 HYDINQ4G0P3 5121 aa5.67□□□□□ -1.5
CCDC47-207ENST00000612558 COX7BP24311 80 aa5.66□□□□□ -1.5
CCDC47-207ENST00000612558 OCIAD2Q56VL3 154 aa5.66□□□□□ -1.5
CCDC47-207ENST00000612558 A0A1W2PNN7 141 aa5.65□□□□□ -1.5
CCDC47-207ENST00000612558 hADV29S1A0JD25 119 aa5.65□□□□□ -1.5
CCDC47-207ENST00000612558 RPL37AP8A6NKH3 93 aa5.65□□□□□ -1.5
CCDC47-207ENST00000612558 PRYO14603 147 aa5.65□□□□□ -1.5
CCDC47-207ENST00000612558 RTL8CO15255 209 aa5.65□□□□□ -1.5
CCDC47-207ENST00000612558 CHTF8P0CG12 524 aa5.65□□□□□ -1.5
CCDC47-207ENST00000612558 ELOF1P60002 83 aaKnown RBP5.65□□□□□ -1.5
CCDC47-207ENST00000612558 K7ERU9 68 aa5.64□□□□□ -1.51
CCDC47-207ENST00000612558 ORMDL1Q9P0S3 153 aa5.64□□□□□ -1.51
CCDC47-207ENST00000612558 IGLV5-52A0A0A0MRZ9 124 aa5.63□□□□□ -1.51
CCDC47-207ENST00000612558 SPRR1AP35321 89 aa5.63□□□□□ -1.51
CCDC47-207ENST00000612558 PPDPFLQ8WWR9 84 aa5.63□□□□□ -1.51
CCDC47-207ENST00000612558 J3QR89 54 aa5.63□□□□□ -1.51
CCDC47-207ENST00000612558 DPH3Q96FX2 82 aa5.63□□□□□ -1.51
CCDC47-207ENST00000612558 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
CCDC47-207ENST00000612558 INAFM2P0DMQ5 153 aa5.62□□□□□ -1.51
CCDC47-207ENST00000612558 FUSP35637 526 aaKnown RBP eCLIP5.62□□□□□ -1.51
CCDC47-207ENST00000612558 SPACA4Q8TDM5 124 aa5.62□□□□□ -1.51
CCDC47-207ENST00000612558 TEX49A0A1B0GTD5 131 aa5.61□□□□□ -1.51
CCDC47-207ENST00000612558 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
CCDC47-207ENST00000612558 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
CCDC47-207ENST00000612558 H3BQ85 93 aa5.61□□□□□ -1.51
CCDC47-207ENST00000612558 PANO1I0J062 215 aa5.61□□□□□ -1.51
CCDC47-207ENST00000612558 TMEM256-PLSCR3K7ERE1 68 aa5.61□□□□□ -1.51
CCDC47-207ENST00000612558 REG3GQ6UW15 175 aa5.61□□□□□ -1.51
CCDC47-207ENST00000612558 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
CCDC47-207ENST00000612558 LCE6AA0A183 80 aa5.6□□□□□ -1.51
CCDC47-207ENST00000612558 EPM2AB3EWF7 344 aa5.6□□□□□ -1.51
CCDC47-207ENST00000612558 B5MCH6 92 aa5.6□□□□□ -1.51
CCDC47-207ENST00000612558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.6□□□□□ -1.51
CCDC47-207ENST00000612558 Q6ZRX8 168 aa5.6□□□□□ -1.51
CCDC47-207ENST00000612558 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
CCDC47-207ENST00000612558 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
CCDC47-207ENST00000612558 UBE2BP63146 152 aa5.59□□□□□ -1.51
CCDC47-207ENST00000612558 Q6ZQY7 126 aa5.59□□□□□ -1.51
CCDC47-207ENST00000612558 DHRS4-AS1Q9P1J3 65 aa5.59□□□□□ -1.51
CCDC47-207ENST00000612558 DNAH5Q8TE73 4624 aa5.58□□□□□ -1.52
CCDC47-207ENST00000612558 OBSCN-AS1Q96MR7 158 aa5.57□□□□□ -1.52
CCDC47-207ENST00000612558 Q9BRP9 147 aa5.57□□□□□ -1.52
CCDC47-207ENST00000612558 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
CCDC47-207ENST00000612558 DNAH8Q96JB1 4490 aa5.56□□□□□ -1.52
CCDC47-207ENST00000612558 JMJD7-PLA2G4BH0Y9G9 81 aa5.56□□□□□ -1.52
CCDC47-207ENST00000612558 FAM19A1Q7Z5A9 133 aa5.56□□□□□ -1.52
CCDC47-207ENST00000612558 KRTAP11-1Q8IUC1 163 aa5.56□□□□□ -1.52
CCDC47-207ENST00000612558 PKD1P98161 4303 aa5.55□□□□□ -1.52
CCDC47-207ENST00000612558 H0Y9J4 135 aa5.55□□□□□ -1.52
CCDC47-207ENST00000612558 LINC00336Q6ZUF6 198 aa5.55□□□□□ -1.52
CCDC47-207ENST00000612558 LAMTOR3Q9UHA4 124 aa5.54□□□□□ -1.52
CCDC47-207ENST00000612558 BCE1O60756 84 aa5.53□□□□□ -1.52
CCDC47-207ENST00000612558 PRLHP81277 87 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms