RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
SRRM3-205ENST00000612155 OBSCN-AS1Q96MR7 158 aa12.69□□□□□ -0.38
SRRM3-205ENST00000612155 FAM240AA0A1B0GVK7 77 aa12.68□□□□□ -0.38
SRRM3-205ENST00000612155 LINC00575Q6W349 94 aa12.68□□□□□ -0.38
SRRM3-205ENST00000612155 PKD1P98161 4303 aa12.67□□□□□ -0.38
SRRM3-205ENST00000612155 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.67□□□□□ -0.38
SRRM3-205ENST00000612155 A0A1B0GX51 115 aa12.67□□□□□ -0.38
SRRM3-205ENST00000612155 ORMDL1Q9P0S3 153 aa12.67□□□□□ -0.38
SRRM3-205ENST00000612155 A0A087WTM6 91 aa12.66□□□□□ -0.38
SRRM3-205ENST00000612155 TRAV23DV6A0A075B6W5 121 aa12.64□□□□□ -0.39
SRRM3-205ENST00000612155 C14orf132Q9NPU4 83 aa12.63□□□□□ -0.39
SRRM3-205ENST00000612155 Q6Q795 121 aa12.63□□□□□ -0.39
SRRM3-205ENST00000612155 SMCR5Q8TEV8 140 aa12.62□□□□□ -0.39
SRRM3-205ENST00000612155 M0R378 163 aa12.62□□□□□ -0.39
SRRM3-205ENST00000612155 INAFM2P0DMQ5 153 aa12.62□□□□□ -0.39
SRRM3-205ENST00000612155 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
SRRM3-205ENST00000612155 SERTAD4-AS1Q5TG53 156 aa12.61□□□□□ -0.39
SRRM3-205ENST00000612155 DNAH5Q8TE73 4624 aa12.6□□□□□ -0.39
SRRM3-205ENST00000612155 hADV29S1A0JD25 119 aa12.6□□□□□ -0.39
SRRM3-205ENST00000612155 ZNF73O43830 326 aaPredicted RBP12.6□□□□□ -0.39
SRRM3-205ENST00000612155 PKHD1P08F94 4074 aa12.6□□□□□ -0.39
SRRM3-205ENST00000612155 TLX1NBP0CAT3 122 aa12.59□□□□□ -0.39
SRRM3-205ENST00000612155 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
SRRM3-205ENST00000612155 J3KT08 172 aa12.58□□□□□ -0.4
SRRM3-205ENST00000612155 KRTAP10-2P60368 255 aa12.58□□□□□ -0.4
SRRM3-205ENST00000612155 GAGE2AQ6NT46 116 aa12.58□□□□□ -0.4
SRRM3-205ENST00000612155 ACYP1P07311 99 aa12.57□□□□□ -0.4
SRRM3-205ENST00000612155 SDIM1Q6ZPB5 146 aa12.57□□□□□ -0.4
SRRM3-205ENST00000612155 FAM19A5Q7Z5A7 132 aaPredicted RBP12.57□□□□□ -0.4
SRRM3-205ENST00000612155 SNCGO76070 127 aa12.56□□□□□ -0.4
SRRM3-205ENST00000612155 TMEM256-PLSCR3K7ERE1 68 aa12.56□□□□□ -0.4
SRRM3-205ENST00000612155 KRTAP7-1Q8IUC3 87 aa12.56□□□□□ -0.4
SRRM3-205ENST00000612155 FAM168BA1KXE4 195 aa12.55□□□□□ -0.4
SRRM3-205ENST00000612155 ELOF1P60002 83 aaKnown RBP12.55□□□□□ -0.4
SRRM3-205ENST00000612155 COX7BP24311 80 aa12.54□□□□□ -0.4
SRRM3-205ENST00000612155 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
SRRM3-205ENST00000612155 RPS28P62857 69 aaKnown RBP12.53□□□□□ -0.4
SRRM3-205ENST00000612155 Q6ZQY7 126 aa12.53□□□□□ -0.4
SRRM3-205ENST00000612155 C14orf177Q52M58 125 aa12.52□□□□□ -0.4
SRRM3-205ENST00000612155 LINC00336Q6ZUF6 198 aa12.52□□□□□ -0.4
SRRM3-205ENST00000612155 TRBV7-6A0A0J9YX20 115 aa12.52□□□□□ -0.41
SRRM3-205ENST00000612155 PLA2G2DQ9UNK4 145 aa12.5□□□□□ -0.41
SRRM3-205ENST00000612155 LINC00528Q8N1L1 170 aa12.5□□□□□ -0.41
SRRM3-205ENST00000612155 IGLV5-52A0A0A0MRZ9 124 aa12.49□□□□□ -0.41
SRRM3-205ENST00000612155 A0A1B0GVY2 172 aa12.48□□□□□ -0.41
SRRM3-205ENST00000612155 NKAPP1Q8N9T2 125 aa12.48□□□□□ -0.41
SRRM3-205ENST00000612155 KCNQ1DNQ9H478 68 aa12.48□□□□□ -0.41
SRRM3-205ENST00000612155 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
SRRM3-205ENST00000612155 JMJD7-PLA2G4BH0Y9G9 81 aa12.47□□□□□ -0.41
SRRM3-205ENST00000612155 LINC00846Q9NV44 126 aa12.47□□□□□ -0.41
SRRM3-205ENST00000612155 EPPK1P58107 5090 aaKnown RBP12.47□□□□□ -0.41
SRRM3-205ENST00000612155 CCKP06307 115 aa12.47□□□□□ -0.41
SRRM3-205ENST00000612155 CNBPP62633 177 aaKnown RBP12.47□□□□□ -0.41
SRRM3-205ENST00000612155 IGLV5-37A0A075B6J1 123 aa12.46□□□□□ -0.41
SRRM3-205ENST00000612155 TRBV7-7A0A0K0K1E9 115 aa12.46□□□□□ -0.42
SRRM3-205ENST00000612155 LINC00643Q86TS7 51 aa12.46□□□□□ -0.42
SRRM3-205ENST00000612155 SEC61GP60059 68 aa12.45□□□□□ -0.42
SRRM3-205ENST00000612155 RPL37AP8A6NKH3 93 aa12.45□□□□□ -0.42
SRRM3-205ENST00000612155 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.45□□□□□ -0.42
SRRM3-205ENST00000612155 DYNC1H1Q14204 4646 aaKnown RBP12.43□□□□□ -0.42
SRRM3-205ENST00000612155 C9orf163Q8N9P6 203 aa12.43□□□□□ -0.42
SRRM3-205ENST00000612155 LRP1BQ9NZR2 4599 aa12.42□□□□□ -0.42
SRRM3-205ENST00000612155 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
SRRM3-205ENST00000612155 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
SRRM3-205ENST00000612155 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
SRRM3-205ENST00000612155 CHTF8P0CG12 524 aa12.4□□□□□ -0.42
SRRM3-205ENST00000612155 RBM3P98179 157 aaKnown RBP12.4□□□□□ -0.42
SRRM3-205ENST00000612155 IGKV2-24A0A0C4DH68 120 aa12.39□□□□□ -0.43
SRRM3-205ENST00000612155 Q6ZQT0 140 aa12.39□□□□□ -0.43
SRRM3-205ENST00000612155 A0A096LNI7 61 aa12.39□□□□□ -0.43
SRRM3-205ENST00000612155 PANO1I0J062 215 aa12.38□□□□□ -0.43
SRRM3-205ENST00000612155 KRTAP10-1P60331 282 aa12.37□□□□□ -0.43
SRRM3-205ENST00000612155 LOC110117498A0A087WWA1 95 aa12.37□□□□□ -0.43
SRRM3-205ENST00000612155 SPRR1AP35321 89 aa12.37□□□□□ -0.43
SRRM3-205ENST00000612155 MRPL55Q7Z7F7 128 aaKnown RBP12.36□□□□□ -0.43
SRRM3-205ENST00000612155 C16orf90A8MZG2 172 aa12.35□□□□□ -0.43
SRRM3-205ENST00000612155 H3BQ85 93 aa12.35□□□□□ -0.43
SRRM3-205ENST00000612155 HAMPP81172 84 aa12.35□□□□□ -0.43
SRRM3-205ENST00000612155 Q9BRP9 147 aa12.35□□□□□ -0.43
SRRM3-205ENST00000612155 PRYO14603 147 aa12.35□□□□□ -0.43
SRRM3-205ENST00000612155 A0A1W2PNN7 141 aa12.34□□□□□ -0.43
SRRM3-205ENST00000612155 IMUPQ9GZP8 106 aa12.34□□□□□ -0.43
SRRM3-205ENST00000612155 FAM30AQ9NZY2 134 aa12.34□□□□□ -0.43
SRRM3-205ENST00000612155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.34□□□□□ -0.43
SRRM3-205ENST00000612155 DNAH8Q96JB1 4490 aa12.34□□□□□ -0.43
SRRM3-205ENST00000612155 IGKV3D-7A0A0C4DH55 119 aa12.33□□□□□ -0.44
SRRM3-205ENST00000612155 Q6ZRX8 168 aa12.33□□□□□ -0.44
SRRM3-205ENST00000612155 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
SRRM3-205ENST00000612155 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
SRRM3-205ENST00000612155 LINC01547P58512 204 aaPredicted RBP12.31□□□□□ -0.44
SRRM3-205ENST00000612155 Q6JHZ5 121 aa12.31□□□□□ -0.44
SRRM3-205ENST00000612155 TRBV7-4A0A0J9YYF1 115 aa12.3□□□□□ -0.44
SRRM3-205ENST00000612155 Q8N377 158 aa12.3□□□□□ -0.44
SRRM3-205ENST00000612155 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
SRRM3-205ENST00000612155 DPH3Q96FX2 82 aa12.29□□□□□ -0.44
SRRM3-205ENST00000612155 DSCR8Q96T75 97 aa12.29□□□□□ -0.44
SRRM3-205ENST00000612155 UQCRQO14949 82 aa12.29□□□□□ -0.44
SRRM3-205ENST00000612155 ERC2-IT1O76042 136 aa12.28□□□□□ -0.44
SRRM3-205ENST00000612155 DEFB105AQ8NG35 78 aa12.28□□□□□ -0.44
SRRM3-205ENST00000612155 ETDCA0A1B0GVM5 59 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms