RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
SMAD4-217ENST00000611848 HIGD2BQ4VC39 106 aa5.7□□□□□ -1.5
SMAD4-217ENST00000611848 C9orf163Q8N9P6 203 aa5.7□□□□□ -1.5
SMAD4-217ENST00000611848 HSPG2P98160 4391 aa5.7□□□□□ -1.5
SMAD4-217ENST00000611848 A0A087WYN8 130 aa5.69□□□□□ -1.5
SMAD4-217ENST00000611848 PRR3P79522 188 aaKnown RBP5.69□□□□□ -1.5
SMAD4-217ENST00000611848 Q8NDZ9 215 aa5.69□□□□□ -1.5
SMAD4-217ENST00000611848 LINC00526Q96FQ7 95 aa5.69□□□□□ -1.5
SMAD4-217ENST00000611848 TMEM126AQ9H061 195 aa5.69□□□□□ -1.5
SMAD4-217ENST00000611848 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
SMAD4-217ENST00000611848 SLPIP03973 132 aa5.68□□□□□ -1.5
SMAD4-217ENST00000611848 XGP55808 180 aa5.68□□□□□ -1.5
SMAD4-217ENST00000611848 C6orf48Q9UBA6 75 aa5.68□□□□□ -1.5
SMAD4-217ENST00000611848 A0A1B0GX51 115 aa5.67□□□□□ -1.5
SMAD4-217ENST00000611848 F8WDY8 70 aa5.67□□□□□ -1.5
SMAD4-217ENST00000611848 Q6ZSA8 131 aa5.67□□□□□ -1.5
SMAD4-217ENST00000611848 C2orf48Q96LS8 159 aa5.67□□□□□ -1.5
SMAD4-217ENST00000611848 HERC2O95714 4834 aa5.67□□□□□ -1.5
SMAD4-217ENST00000611848 MT-ATP8P03928 68 aa5.66□□□□□ -1.5
SMAD4-217ENST00000611848 LINC00167Q96N53 147 aa5.66□□□□□ -1.5
SMAD4-217ENST00000611848 FAM30AQ9NZY2 134 aa5.66□□□□□ -1.5
SMAD4-217ENST00000611848 DNAL4O96015 105 aa5.66□□□□□ -1.5
SMAD4-217ENST00000611848 SDIM1Q6ZPB5 146 aa5.66□□□□□ -1.5
SMAD4-217ENST00000611848 PKIGQ9Y2B9 76 aa5.66□□□□□ -1.5
SMAD4-217ENST00000611848 NCR3O14931 201 aa5.65□□□□□ -1.51
SMAD4-217ENST00000611848 IGLV6-57P01721 117 aa5.65□□□□□ -1.51
SMAD4-217ENST00000611848 SYCNQ0VAF6 134 aa5.65□□□□□ -1.51
SMAD4-217ENST00000611848 OBSCN-AS1Q96MR7 158 aa5.65□□□□□ -1.51
SMAD4-217ENST00000611848 CAMK2N2Q96S95 79 aa5.65□□□□□ -1.51
SMAD4-217ENST00000611848 PLA2G2DQ9UNK4 145 aa5.65□□□□□ -1.51
SMAD4-217ENST00000611848 ACYP1P07311 99 aa5.64□□□□□ -1.51
SMAD4-217ENST00000611848 FAT1Q14517 4588 aa5.64□□□□□ -1.51
SMAD4-217ENST00000611848 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
SMAD4-217ENST00000611848 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
SMAD4-217ENST00000611848 Q6ZRU5 148 aa5.63□□□□□ -1.51
SMAD4-217ENST00000611848 C6orf99Q4VX62 202 aa5.63□□□□□ -1.51
SMAD4-217ENST00000611848 Q8N1X5 172 aa5.63□□□□□ -1.51
SMAD4-217ENST00000611848 NDUFC2-KCTD14E9PQ53 114 aa5.62□□□□□ -1.51
SMAD4-217ENST00000611848 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
SMAD4-217ENST00000611848 LINC00575Q6W349 94 aa5.62□□□□□ -1.51
SMAD4-217ENST00000611848 SCXQ7RTU7 201 aa5.62□□□□□ -1.51
SMAD4-217ENST00000611848 ORMDL1Q9P0S3 153 aa5.62□□□□□ -1.51
SMAD4-217ENST00000611848 VPREB1P12018 145 aa5.61□□□□□ -1.51
SMAD4-217ENST00000611848 HAMPP81172 84 aa5.61□□□□□ -1.51
SMAD4-217ENST00000611848 C9orf129Q5T035 196 aaKnown RBP5.61□□□□□ -1.51
SMAD4-217ENST00000611848 CIRBP-AS1Q8TBR5 109 aa5.61□□□□□ -1.51
SMAD4-217ENST00000611848 XAGE1AQ9HD64 81 aa5.61□□□□□ -1.51
SMAD4-217ENST00000611848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-217ENST00000611848 LOC107984640A0A0U1RRK4 108 aa5.6□□□□□ -1.51
SMAD4-217ENST00000611848 SNCGO76070 127 aa5.6□□□□□ -1.51
SMAD4-217ENST00000611848 Q6Q795 121 aa5.6□□□□□ -1.51
SMAD4-217ENST00000611848 SPACA4Q8TDM5 124 aa5.6□□□□□ -1.51
SMAD4-217ENST00000611848 LINC00474Q9P2X8 69 aa5.6□□□□□ -1.51
SMAD4-217ENST00000611848 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
SMAD4-217ENST00000611848 B5MCH6 92 aa5.59□□□□□ -1.51
SMAD4-217ENST00000611848 PANO1I0J062 215 aa5.59□□□□□ -1.51
SMAD4-217ENST00000611848 SMR3BP02814 79 aaPredicted RBP5.59□□□□□ -1.51
SMAD4-217ENST00000611848 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
SMAD4-217ENST00000611848 DPH3Q96FX2 82 aa5.59□□□□□ -1.51
SMAD4-217ENST00000611848 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 A0A096LNI7 61 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 IGKV2-24A0A0C4DH68 120 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 TRBV7-6A0A0J9YX20 115 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 EPM2AB3EWF7 344 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 TMEM256-PLSCR3K7ERE1 68 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 M0R378 163 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 TLX1NBP0CAT3 122 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 Q6ZRP5 223 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.52
SMAD4-217ENST00000611848 hADV29S1A0JD25 119 aa5.58□□□□□ -1.52
SMAD4-217ENST00000611848 GAGE2BQ13066 116 aa5.58□□□□□ -1.52
SMAD4-217ENST00000611848 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
SMAD4-217ENST00000611848 JMJD7-PLA2G4BH0Y9G9 81 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 GAGE2EQ4V326 116 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 Q5VSD8 79 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 SMCR5Q8TEV8 140 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 C14orf132Q9NPU4 83 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 GAGE2DQ9UEU5 116 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 VPS13BQ7Z7G8 4022 aa5.57□□□□□ -1.52
SMAD4-217ENST00000611848 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
SMAD4-217ENST00000611848 ZNF73O43830 326 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-217ENST00000611848 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
SMAD4-217ENST00000611848 LINC00643Q86TS7 51 aa5.56□□□□□ -1.52
SMAD4-217ENST00000611848 H3BQ85 93 aa5.56□□□□□ -1.52
SMAD4-217ENST00000611848 ELOF1P60002 83 aaKnown RBP5.56□□□□□ -1.52
SMAD4-217ENST00000611848 KRTAP4-5Q9BYR2 181 aa5.56□□□□□ -1.52
SMAD4-217ENST00000611848 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
SMAD4-217ENST00000611848 CCKP06307 115 aa5.55□□□□□ -1.52
SMAD4-217ENST00000611848 COX7BP24311 80 aa5.55□□□□□ -1.52
SMAD4-217ENST00000611848 IMUPQ9GZP8 106 aa5.55□□□□□ -1.52
SMAD4-217ENST00000611848 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
SMAD4-217ENST00000611848 A0A1B0GV72 72 aa5.53□□□□□ -1.52
SMAD4-217ENST00000611848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.53□□□□□ -1.52
SMAD4-217ENST00000611848 A0A1W2PNN7 141 aa5.52□□□□□ -1.53
SMAD4-217ENST00000611848 SERTAD4-AS1Q5TG53 156 aa5.52□□□□□ -1.53
SMAD4-217ENST00000611848 Q6ZQY7 126 aa5.52□□□□□ -1.53
SMAD4-217ENST00000611848 C7orf33Q8WU49 177 aa5.52□□□□□ -1.53
SMAD4-217ENST00000611848 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms