RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
CHMP2A-208ENST00000601220 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
CHMP2A-208ENST00000601220 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
CHMP2A-208ENST00000601220 DPM2O94777 84 aa9.9□□□□□ -0.82
CHMP2A-208ENST00000601220 JOSD1Q15040 202 aaPredicted RBP9.89□□□□□ -0.83
CHMP2A-208ENST00000601220 KRTAP19-2Q3LHN2 52 aa9.89□□□□□ -0.83
CHMP2A-208ENST00000601220 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
CHMP2A-208ENST00000601220 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
CHMP2A-208ENST00000601220 IGKCP01834 107 aa9.88□□□□□ -0.83
CHMP2A-208ENST00000601220 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
CHMP2A-208ENST00000601220 C9orf153Q5TBE3 101 aa9.88□□□□□ -0.83
CHMP2A-208ENST00000601220 C5orf52A6NGY3 159 aa9.87□□□□□ -0.83
CHMP2A-208ENST00000601220 HERVK_113P61574 105 aa9.87□□□□□ -0.83
CHMP2A-208ENST00000601220 NPC2P61916 151 aa9.87□□□□□ -0.83
CHMP2A-208ENST00000601220 HSPB8Q9UJY1 196 aa9.87□□□□□ -0.83
CHMP2A-208ENST00000601220 FABP4P15090 132 aa9.86□□□□□ -0.83
CHMP2A-208ENST00000601220 SPRR1BP22528 89 aa9.85□□□□□ -0.83
CHMP2A-208ENST00000601220 FSIP2Q5CZC0 6907 aa9.84□□□□□ -0.83
CHMP2A-208ENST00000601220 E9PLD3 99 aa9.83□□□□□ -0.84
CHMP2A-208ENST00000601220 LITAFQ99732 161 aa9.83□□□□□ -0.84
CHMP2A-208ENST00000601220 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
CHMP2A-208ENST00000601220 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
CHMP2A-208ENST00000601220 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
CHMP2A-208ENST00000601220 COLCA2A8K830 154 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 MT1HP80294 61 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 PCOTHQ58A44 107 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 HRCT1Q6UXD1 115 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 DHRS4-AS1Q9P1J3 65 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 CRCT1Q9UGL9 99 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 CBY1Q9Y3M2 126 aa9.77□□□□□ -0.85
CHMP2A-208ENST00000601220 TIMM17BO60830 172 aa9.75□□□□□ -0.85
CHMP2A-208ENST00000601220 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
CHMP2A-208ENST00000601220 SLC25A34Q6PIV7 304 aa9.74□□□□□ -0.85
CHMP2A-208ENST00000601220 OR13C6PQ8NH95 151 aa9.74□□□□□ -0.85
CHMP2A-208ENST00000601220 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
CHMP2A-208ENST00000601220 SYS1-DBNDD2H3BUS1 97 aa9.73□□□□□ -0.85
CHMP2A-208ENST00000601220 ELOF1P60002 83 aaKnown RBP9.73□□□□□ -0.85
CHMP2A-208ENST00000601220 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
CHMP2A-208ENST00000601220 LAMTOR3Q9UHA4 124 aa9.73□□□□□ -0.85
CHMP2A-208ENST00000601220 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
CHMP2A-208ENST00000601220 CD164Q04900 197 aa9.71□□□□□ -0.86
CHMP2A-208ENST00000601220 COX7BP24311 80 aa9.7□□□□□ -0.86
CHMP2A-208ENST00000601220 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
CHMP2A-208ENST00000601220 C6orf99Q4VX62 202 aa9.69□□□□□ -0.86
CHMP2A-208ENST00000601220 SMIM29Q86T20 159 aa9.69□□□□□ -0.86
CHMP2A-208ENST00000601220 TTTY13Q9BZ97 58 aa9.69□□□□□ -0.86
CHMP2A-208ENST00000601220 Q5XG85 94 aa9.68□□□□□ -0.86
CHMP2A-208ENST00000601220 ZNF815PA8K554 130 aa9.67□□□□□ -0.86
CHMP2A-208ENST00000601220 Q1RN00 199 aa9.67□□□□□ -0.86
CHMP2A-208ENST00000601220 LINC00518Q8N0U6 118 aa9.67□□□□□ -0.86
CHMP2A-208ENST00000601220 TEX49A0A1B0GTD5 131 aa9.66□□□□□ -0.86
CHMP2A-208ENST00000601220 TAL2Q16559 108 aa9.66□□□□□ -0.86
CHMP2A-208ENST00000601220 DEFB105AQ8NG35 78 aa9.66□□□□□ -0.86
CHMP2A-208ENST00000601220 PRO1933Q9H354 126 aa9.66□□□□□ -0.86
CHMP2A-208ENST00000601220 TRBV7-6A0A0J9YX20 115 aa9.65□□□□□ -0.86
CHMP2A-208ENST00000601220 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
CHMP2A-208ENST00000601220 C1orf195Q5TG92 126 aa9.65□□□□□ -0.86
CHMP2A-208ENST00000601220 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
CHMP2A-208ENST00000601220 H7C2G1 150 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BKO60814 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BJP06899 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 CFC1BP0CG36 223 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BOP23527 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BBP33778 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BDP58876 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BCP62807 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST2H2BEQ16778 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BHQ93079 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BNQ99877 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 HIST1H2BMQ99879 126 aa9.64□□□□□ -0.87
CHMP2A-208ENST00000601220 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
CHMP2A-208ENST00000601220 A0A0G2JQZ4 141 aa9.62□□□□□ -0.87
CHMP2A-208ENST00000601220 KRTAP10-6P60371 365 aaPredicted RBP9.62□□□□□ -0.87
CHMP2A-208ENST00000601220 AKR1D1P51857 326 aa9.61□□□□□ -0.87
CHMP2A-208ENST00000601220 FLGP20930 4061 aaPredicted RBP9.6□□□□□ -0.87
CHMP2A-208ENST00000601220 A0A1B0GWB2 263 aa9.59□□□□□ -0.87
CHMP2A-208ENST00000601220 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
CHMP2A-208ENST00000601220 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
CHMP2A-208ENST00000601220 IFITM1P13164 125 aa9.55□□□□□ -0.88
CHMP2A-208ENST00000601220 ANKRD39Q53RE8 183 aa9.54□□□□□ -0.88
CHMP2A-208ENST00000601220 A6NDN8 102 aa9.53□□□□□ -0.88
CHMP2A-208ENST00000601220 SCGB1D4Q6XE38 83 aa9.53□□□□□ -0.88
CHMP2A-208ENST00000601220 MUSTN1Q8IVN3 82 aa9.53□□□□□ -0.88
CHMP2A-208ENST00000601220 A4D1N5 150 aa9.51□□□□□ -0.89
CHMP2A-208ENST00000601220 COA6Q5JTJ3 125 aaKnown RBP9.51□□□□□ -0.89
CHMP2A-208ENST00000601220 Q6ZVH6 145 aa9.51□□□□□ -0.89
CHMP2A-208ENST00000601220 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
CHMP2A-208ENST00000601220 KRTDAPP60985 99 aa9.5□□□□□ -0.89
CHMP2A-208ENST00000601220 PCP2Q8IVA1 136 aa9.49□□□□□ -0.89
CHMP2A-208ENST00000601220 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
CHMP2A-208ENST00000601220 M0R2T5 61 aa9.46□□□□□ -0.9
CHMP2A-208ENST00000601220 TCL1BO95988 128 aa9.46□□□□□ -0.9
CHMP2A-208ENST00000601220 NHP2Q9NX24 153 aaKnown RBP9.46□□□□□ -0.9
CHMP2A-208ENST00000601220 TRAV13-2A0A0B4J235 113 aa9.45□□□□□ -0.9
CHMP2A-208ENST00000601220 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
CHMP2A-208ENST00000601220 COX6B2Q6YFQ2 88 aa9.43□□□□□ -0.9
CHMP2A-208ENST00000601220 C20orf202A1L168 122 aa9.42□□□□□ -0.9
CHMP2A-208ENST00000601220 LINC00575Q6W349 94 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms