RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
VRK3-205ENST00000593919 C9orf129Q5T035 196 aaKnown RBP8.54□□□□□ -1.04
VRK3-205ENST00000593919 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
VRK3-205ENST00000593919 A0A087WTM6 91 aa8.53□□□□□ -1.04
VRK3-205ENST00000593919 INAFM2P0DMQ5 153 aa8.53□□□□□ -1.04
VRK3-205ENST00000593919 Q8N814 137 aa8.53□□□□□ -1.04
VRK3-205ENST00000593919 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.04
VRK3-205ENST00000593919 GAGE2AQ6NT46 116 aa8.52□□□□□ -1.05
VRK3-205ENST00000593919 A0A1B0GX51 115 aa8.52□□□□□ -1.05
VRK3-205ENST00000593919 IGLV6-57P01721 117 aa8.52□□□□□ -1.05
VRK3-205ENST00000593919 LINC00167Q96N53 147 aa8.52□□□□□ -1.05
VRK3-205ENST00000593919 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.05
VRK3-205ENST00000593919 ACYP1P07311 99 aa8.51□□□□□ -1.05
VRK3-205ENST00000593919 TRBV10-3A0A0K0K1G6 114 aa8.5□□□□□ -1.05
VRK3-205ENST00000593919 LOC107984640A0A0U1RRK4 108 aa8.5□□□□□ -1.05
VRK3-205ENST00000593919 LINC00575Q6W349 94 aa8.49□□□□□ -1.05
VRK3-205ENST00000593919 TRAV23DV6A0A075B6W5 121 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 LCE6AA0A183 80 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 RTL8CO15255 209 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 SMIM20Q8N5G0 67 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 SMCR5Q8TEV8 140 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 OBSCN-AS1Q96MR7 158 aa8.48□□□□□ -1.05
VRK3-205ENST00000593919 KMT2CQ8NEZ4 4911 aaKnown RBP8.46□□□□□ -1.05
VRK3-205ENST00000593919 A0A096LNI7 61 aa8.46□□□□□ -1.05
VRK3-205ENST00000593919 hADV29S1A0JD25 119 aa8.46□□□□□ -1.05
VRK3-205ENST00000593919 DIRC1Q969H9 104 aa8.46□□□□□ -1.05
VRK3-205ENST00000593919 FAT2Q9NYQ8 4349 aa8.46□□□□□ -1.05
VRK3-205ENST00000593919 TMEM256-PLSCR3K7ERE1 68 aa8.46□□□□□ -1.06
VRK3-205ENST00000593919 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.06
VRK3-205ENST00000593919 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
VRK3-205ENST00000593919 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
VRK3-205ENST00000593919 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
VRK3-205ENST00000593919 FAM168BA1KXE4 195 aa8.44□□□□□ -1.06
VRK3-205ENST00000593919 M0R378 163 aa8.44□□□□□ -1.06
VRK3-205ENST00000593919 ZNF73O43830 326 aaPredicted RBP8.44□□□□□ -1.06
VRK3-205ENST00000593919 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
VRK3-205ENST00000593919 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 COX7BP24311 80 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 KRTAP7-1Q8IUC3 87 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 PKD1P98161 4303 aa8.42□□□□□ -1.06
VRK3-205ENST00000593919 Q6ZQY7 126 aa8.41□□□□□ -1.06
VRK3-205ENST00000593919 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
VRK3-205ENST00000593919 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
VRK3-205ENST00000593919 TRBV7-7A0A0K0K1E9 115 aa8.41□□□□□ -1.06
VRK3-205ENST00000593919 FAM19A5Q7Z5A7 132 aaPredicted RBP8.41□□□□□ -1.06
VRK3-205ENST00000593919 RYR2Q92736 4967 aa8.4□□□□□ -1.06
VRK3-205ENST00000593919 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.06
VRK3-205ENST00000593919 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
VRK3-205ENST00000593919 ELOF1P60002 83 aaKnown RBP8.4□□□□□ -1.06
VRK3-205ENST00000593919 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
VRK3-205ENST00000593919 PRYO14603 147 aa8.39□□□□□ -1.07
VRK3-205ENST00000593919 CCKP06307 115 aa8.39□□□□□ -1.07
VRK3-205ENST00000593919 LINC00846Q9NV44 126 aa8.39□□□□□ -1.07
VRK3-205ENST00000593919 LAMTOR3Q9UHA4 124 aa8.39□□□□□ -1.07
VRK3-205ENST00000593919 A0A1W2PNN7 141 aa8.38□□□□□ -1.07
VRK3-205ENST00000593919 PANO1I0J062 215 aa8.38□□□□□ -1.07
VRK3-205ENST00000593919 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
VRK3-205ENST00000593919 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
VRK3-205ENST00000593919 V9GYY9 64 aa8.37□□□□□ -1.07
VRK3-205ENST00000593919 TRBV7-6A0A0J9YX20 115 aa8.37□□□□□ -1.07
VRK3-205ENST00000593919 LINC00474Q9P2X8 69 aa8.37□□□□□ -1.07
VRK3-205ENST00000593919 MRPL55Q7Z7F7 128 aaKnown RBP8.36□□□□□ -1.07
VRK3-205ENST00000593919 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
VRK3-205ENST00000593919 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
VRK3-205ENST00000593919 RPL37AP8A6NKH3 93 aa8.35□□□□□ -1.07
VRK3-205ENST00000593919 RBM3P98179 157 aaKnown RBP8.35□□□□□ -1.07
VRK3-205ENST00000593919 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.35□□□□□ -1.07
VRK3-205ENST00000593919 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
VRK3-205ENST00000593919 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
VRK3-205ENST00000593919 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
VRK3-205ENST00000593919 IGKV3D-7A0A0C4DH55 119 aa8.33□□□□□ -1.08
VRK3-205ENST00000593919 FAM236AA0A1B0GUQ0 79 aa8.33□□□□□ -1.08
VRK3-205ENST00000593919 FAM236BA0A1B0GV22 79 aa8.33□□□□□ -1.08
VRK3-205ENST00000593919 H3BQ85 93 aa8.33□□□□□ -1.08
VRK3-205ENST00000593919 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
VRK3-205ENST00000593919 KCNQ1DNQ9H478 68 aa8.32□□□□□ -1.08
VRK3-205ENST00000593919 Q6JHZ5 121 aa8.31□□□□□ -1.08
VRK3-205ENST00000593919 Q6ZQT0 140 aa8.31□□□□□ -1.08
VRK3-205ENST00000593919 LINC00336Q6ZUF6 198 aa8.31□□□□□ -1.08
VRK3-205ENST00000593919 LOC110117498A0A087WWA1 95 aa8.3□□□□□ -1.08
VRK3-205ENST00000593919 PHF5AQ7RTV0 110 aaKnown RBP8.3□□□□□ -1.08
VRK3-205ENST00000593919 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
VRK3-205ENST00000593919 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
VRK3-205ENST00000593919 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
VRK3-205ENST00000593919 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
VRK3-205ENST00000593919 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
VRK3-205ENST00000593919 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
VRK3-205ENST00000593919 SPRR1AP35321 89 aa8.26□□□□□ -1.09
VRK3-205ENST00000593919 KRTAP11-1Q8IUC1 163 aa8.26□□□□□ -1.09
VRK3-205ENST00000593919 KRTAP4-16G5E9R7 235 aaPredicted RBP8.26□□□□□ -1.09
VRK3-205ENST00000593919 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
VRK3-205ENST00000593919 UBE2BP63146 152 aa8.26□□□□□ -1.09
VRK3-205ENST00000593919 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
VRK3-205ENST00000593919 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
VRK3-205ENST00000593919 RYR3Q15413 4870 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms