RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 IGLV5-37A0A075B6J1 123 aa5.99□□□□□ -1.45
SS18-220ENST00000582092 PRYO14603 147 aa5.99□□□□□ -1.45
SS18-220ENST00000582092 SERTAD4-AS1Q5TG53 156 aa5.99□□□□□ -1.45
SS18-220ENST00000582092 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
SS18-220ENST00000582092 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
SS18-220ENST00000582092 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
SS18-220ENST00000582092 RPL37AP8A6NKH3 93 aa5.98□□□□□ -1.45
SS18-220ENST00000582092 KCNQ1DNQ9H478 68 aa5.98□□□□□ -1.45
SS18-220ENST00000582092 A0A096LNI7 61 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 FAM168BA1KXE4 195 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 LRCOL1A6NCL2 159 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 JMJD7-PLA2G4BH0Y9G9 81 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 ELOF1P60002 83 aaKnown RBP5.97□□□□□ -1.45
SS18-220ENST00000582092 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.97□□□□□ -1.45
SS18-220ENST00000582092 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 LAMTOR3Q9UHA4 124 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 KMT2AQ03164 3969 aa5.97□□□□□ -1.45
SS18-220ENST00000582092 HYDINQ4G0P3 5121 aa5.96□□□□□ -1.46
SS18-220ENST00000582092 IGLV1-50A0A075B6I6 118 aa5.96□□□□□ -1.46
SS18-220ENST00000582092 A0A087WTM6 91 aa5.96□□□□□ -1.46
SS18-220ENST00000582092 UBE2BP63146 152 aa5.96□□□□□ -1.46
SS18-220ENST00000582092 TNP2Q05952 138 aa5.96□□□□□ -1.46
SS18-220ENST00000582092 Q6ZRN7 208 aaPredicted RBP5.96□□□□□ -1.46
SS18-220ENST00000582092 DHRS4-AS1Q9P1J3 65 aa5.96□□□□□ -1.46
SS18-220ENST00000582092 VPS13DQ5THJ4 4388 aa5.95□□□□□ -1.46
SS18-220ENST00000582092 ACYP1P07311 99 aa5.95□□□□□ -1.46
SS18-220ENST00000582092 REG3GQ6UW15 175 aa5.95□□□□□ -1.46
SS18-220ENST00000582092 Q6ZQY7 126 aa5.95□□□□□ -1.46
SS18-220ENST00000582092 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
SS18-220ENST00000582092 SIGMAR1Q99720 223 aa5.94□□□□□ -1.46
SS18-220ENST00000582092 IGLV5-52A0A0A0MRZ9 124 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 A0A1B0GV72 72 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 RBM3P98179 157 aaKnown RBP5.92□□□□□ -1.46
SS18-220ENST00000582092 SDIM1Q6ZPB5 146 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 LINC00528Q8N1L1 170 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 DSCR8Q96T75 97 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 C14orf132Q9NPU4 83 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 DNAH6Q9C0G6 4158 aa5.92□□□□□ -1.46
SS18-220ENST00000582092 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
SS18-220ENST00000582092 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
SS18-220ENST00000582092 C21orf62-AS1Q17RA5 79 aa5.91□□□□□ -1.46
SS18-220ENST00000582092 FAM19A1Q7Z5A9 133 aa5.91□□□□□ -1.46
SS18-220ENST00000582092 DEFB105AQ8NG35 78 aa5.91□□□□□ -1.46
SS18-220ENST00000582092 A0A1W2PNN7 141 aa5.9□□□□□ -1.46
SS18-220ENST00000582092 B5MCH6 92 aa5.9□□□□□ -1.46
SS18-220ENST00000582092 PDE6GP18545 87 aa5.9□□□□□ -1.46
SS18-220ENST00000582092 Q6ZRX8 168 aa5.9□□□□□ -1.46
SS18-220ENST00000582092 UBE2AP49459 152 aa5.89□□□□□ -1.47
SS18-220ENST00000582092 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
SS18-220ENST00000582092 CDK2AP2O75956 126 aa5.88□□□□□ -1.47
SS18-220ENST00000582092 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
SS18-220ENST00000582092 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
SS18-220ENST00000582092 CCKP06307 115 aa5.87□□□□□ -1.47
SS18-220ENST00000582092 SPRR1AP35321 89 aa5.87□□□□□ -1.47
SS18-220ENST00000582092 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
SS18-220ENST00000582092 OBSCN-AS1Q96MR7 158 aa5.87□□□□□ -1.47
SS18-220ENST00000582092 F8WEM9 126 aa5.86□□□□□ -1.47
SS18-220ENST00000582092 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
SS18-220ENST00000582092 EPPK1P58107 5090 aaKnown RBP5.86□□□□□ -1.47
SS18-220ENST00000582092 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
SS18-220ENST00000582092 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
SS18-220ENST00000582092 HIGD2AQ9BW72 106 aa5.85□□□□□ -1.47
SS18-220ENST00000582092 DNAH10Q8IVF4 4471 aa5.85□□□□□ -1.47
SS18-220ENST00000582092 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
SS18-220ENST00000582092 KRTAP4-16G5E9R7 235 aaPredicted RBP5.84□□□□□ -1.47
SS18-220ENST00000582092 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
SS18-220ENST00000582092 PRLHP81277 87 aa5.83□□□□□ -1.48
SS18-220ENST00000582092 LINC00643Q86TS7 51 aa5.83□□□□□ -1.48
SS18-220ENST00000582092 SMCR5Q8TEV8 140 aa5.83□□□□□ -1.48
SS18-220ENST00000582092 Q9BRP9 147 aa5.83□□□□□ -1.48
SS18-220ENST00000582092 UBL5Q9BZL1 73 aa5.83□□□□□ -1.48
SS18-220ENST00000582092 H0Y9J4 135 aa5.82□□□□□ -1.48
SS18-220ENST00000582092 BCE1O60756 84 aa5.82□□□□□ -1.48
SS18-220ENST00000582092 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
SS18-220ENST00000582092 FUSP35637 526 aaKnown RBP eCLIP5.82□□□□□ -1.48
SS18-220ENST00000582092 XGP55808 180 aa5.82□□□□□ -1.48
SS18-220ENST00000582092 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.82□□□□□ -1.48
SS18-220ENST00000582092 EPM2AB3EWF7 344 aa5.81□□□□□ -1.48
SS18-220ENST00000582092 SCGB1A1P11684 91 aa5.81□□□□□ -1.48
SS18-220ENST00000582092 Q6ZQT0 140 aa5.81□□□□□ -1.48
SS18-220ENST00000582092 Q8N377 158 aa5.81□□□□□ -1.48
SS18-220ENST00000582092 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
SS18-220ENST00000582092 IGLV5-48A0A075B6I7 105 aa5.79□□□□□ -1.48
SS18-220ENST00000582092 ERC2-IT1O76042 136 aa5.79□□□□□ -1.48
SS18-220ENST00000582092 PLAC8Q9NZF1 115 aa5.79□□□□□ -1.48
SS18-220ENST00000582092 TRBV7-4A0A0J9YYF1 115 aa5.78□□□□□ -1.48
SS18-220ENST00000582092 PANO1I0J062 215 aa5.78□□□□□ -1.48
SS18-220ENST00000582092 PCP4P48539 62 aa5.78□□□□□ -1.48
SS18-220ENST00000582092 Q8N1X5 172 aa5.78□□□□□ -1.48
SS18-220ENST00000582092 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
SS18-220ENST00000582092 ZNF706Q9Y5V0 76 aaPredicted RBP5.78□□□□□ -1.48
SS18-220ENST00000582092 HECTD4Q9Y4D8 3996 aa5.77□□□□□ -1.49
SS18-220ENST00000582092 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
SS18-220ENST00000582092 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
SS18-220ENST00000582092 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
SS18-220ENST00000582092 KRTAP10-1P60331 282 aa5.76□□□□□ -1.49
SS18-220ENST00000582092 ATP5EP2Q5VTU8 51 aa5.76□□□□□ -1.49
SS18-220ENST00000582092 Q6JHZ5 121 aa5.76□□□□□ -1.49
SS18-220ENST00000582092 Q6Q795 121 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms