RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 A0A1B0GV72 72 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 RPL37AP8A6NKH3 93 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 FUSP35637 526 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 PPDPFLQ8WWR9 84 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 LINC00167Q96N53 147 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 A0A1B0GX51 115 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 A0A1W2PNN7 141 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 ELOF1P60002 83 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-218ENST00000580391 COX7BP24311 80 aa9.43□□□□□ -0.9
CDK5RAP3-218ENST00000580391 KCNQ1DNQ9H478 68 aa9.43□□□□□ -0.9
CDK5RAP3-218ENST00000580391 DNAH11Q96DT5 4516 aa9.43□□□□□ -0.9
CDK5RAP3-218ENST00000580391 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
CDK5RAP3-218ENST00000580391 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
CDK5RAP3-218ENST00000580391 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
CDK5RAP3-218ENST00000580391 TRBV7-6A0A0J9YX20 115 aa9.41□□□□□ -0.9
CDK5RAP3-218ENST00000580391 PANO1I0J062 215 aa9.41□□□□□ -0.9
CDK5RAP3-218ENST00000580391 ORMDL1Q9P0S3 153 aa9.41□□□□□ -0.9
CDK5RAP3-218ENST00000580391 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
CDK5RAP3-218ENST00000580391 PRYO14603 147 aa9.4□□□□□ -0.9
CDK5RAP3-218ENST00000580391 RTL8CO15255 209 aa9.4□□□□□ -0.9
CDK5RAP3-218ENST00000580391 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
CDK5RAP3-218ENST00000580391 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
CDK5RAP3-218ENST00000580391 TNP2Q05952 138 aa9.39□□□□□ -0.91
CDK5RAP3-218ENST00000580391 FAT2Q9NYQ8 4349 aa9.38□□□□□ -0.91
CDK5RAP3-218ENST00000580391 J3QR89 54 aa9.38□□□□□ -0.91
CDK5RAP3-218ENST00000580391 SNCGO76070 127 aa9.37□□□□□ -0.91
CDK5RAP3-218ENST00000580391 Q6ZQY7 126 aa9.37□□□□□ -0.91
CDK5RAP3-218ENST00000580391 KRTAP4-16G5E9R7 235 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-218ENST00000580391 SPRR1AP35321 89 aa9.37□□□□□ -0.91
CDK5RAP3-218ENST00000580391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-218ENST00000580391 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
CDK5RAP3-218ENST00000580391 PHF5AQ7RTV0 110 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-218ENST00000580391 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
CDK5RAP3-218ENST00000580391 IGLV5-52A0A0A0MRZ9 124 aa9.34□□□□□ -0.91
CDK5RAP3-218ENST00000580391 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
CDK5RAP3-218ENST00000580391 ETDCA0A1B0GVM5 59 aa9.33□□□□□ -0.92
CDK5RAP3-218ENST00000580391 B5MCH6 92 aa9.33□□□□□ -0.92
CDK5RAP3-218ENST00000580391 Q6ZRX8 168 aa9.33□□□□□ -0.92
CDK5RAP3-218ENST00000580391 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
CDK5RAP3-218ENST00000580391 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
CDK5RAP3-218ENST00000580391 SIGMAR1Q99720 223 aa9.32□□□□□ -0.92
CDK5RAP3-218ENST00000580391 PKD1P98161 4303 aa9.32□□□□□ -0.92
CDK5RAP3-218ENST00000580391 TMEM256-PLSCR3K7ERE1 68 aa9.32□□□□□ -0.92
CDK5RAP3-218ENST00000580391 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-218ENST00000580391 Q9BRP9 147 aa9.32□□□□□ -0.92
CDK5RAP3-218ENST00000580391 UBE2BP63146 152 aa9.3□□□□□ -0.92
CDK5RAP3-218ENST00000580391 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
CDK5RAP3-218ENST00000580391 OBSCN-AS1Q96MR7 158 aa9.3□□□□□ -0.92
CDK5RAP3-218ENST00000580391 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
CDK5RAP3-218ENST00000580391 C14orf132Q9NPU4 83 aa9.29□□□□□ -0.92
CDK5RAP3-218ENST00000580391 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
CDK5RAP3-218ENST00000580391 DHRS4-AS1Q9P1J3 65 aa9.27□□□□□ -0.93
CDK5RAP3-218ENST00000580391 PRLHP81277 87 aa9.26□□□□□ -0.93
CDK5RAP3-218ENST00000580391 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
CDK5RAP3-218ENST00000580391 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
CDK5RAP3-218ENST00000580391 CDIP1Q9H305 208 aa9.26□□□□□ -0.93
CDK5RAP3-218ENST00000580391 ERC2-IT1O76042 136 aa9.25□□□□□ -0.93
CDK5RAP3-218ENST00000580391 LAMTOR3Q9UHA4 124 aa9.25□□□□□ -0.93
CDK5RAP3-218ENST00000580391 LCE6AA0A183 80 aa9.24□□□□□ -0.93
CDK5RAP3-218ENST00000580391 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
CDK5RAP3-218ENST00000580391 RYR2Q92736 4967 aa9.24□□□□□ -0.93
CDK5RAP3-218ENST00000580391 JMJD7-PLA2G4BH0Y9G9 81 aa9.23□□□□□ -0.93
CDK5RAP3-218ENST00000580391 H3BQ85 93 aa9.23□□□□□ -0.93
CDK5RAP3-218ENST00000580391 LINC01547P58512 204 aaPredicted RBP9.23□□□□□ -0.93
CDK5RAP3-218ENST00000580391 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
CDK5RAP3-218ENST00000580391 GAGE2AQ6NT46 116 aa9.22□□□□□ -0.93
CDK5RAP3-218ENST00000580391 DEFB105AQ8NG35 78 aa9.22□□□□□ -0.93
CDK5RAP3-218ENST00000580391 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
CDK5RAP3-218ENST00000580391 FAM240AA0A1B0GVK7 77 aa9.21□□□□□ -0.93
CDK5RAP3-218ENST00000580391 GHRHP01286 108 aa9.21□□□□□ -0.93
CDK5RAP3-218ENST00000580391 Q8N377 158 aa9.21□□□□□ -0.94
CDK5RAP3-218ENST00000580391 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.94
CDK5RAP3-218ENST00000580391 HIGD2AQ9BW72 106 aa9.2□□□□□ -0.94
CDK5RAP3-218ENST00000580391 NDUFV3P56181 108 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-218ENST00000580391 RBM3P98179 157 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-218ENST00000580391 IGLV5-48A0A075B6I7 105 aa9.18□□□□□ -0.94
CDK5RAP3-218ENST00000580391 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
CDK5RAP3-218ENST00000580391 BCE1O60756 84 aa9.17□□□□□ -0.94
CDK5RAP3-218ENST00000580391 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
CDK5RAP3-218ENST00000580391 UBE2AP49459 152 aa9.17□□□□□ -0.94
CDK5RAP3-218ENST00000580391 XGP55808 180 aa9.17□□□□□ -0.94
CDK5RAP3-218ENST00000580391 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
CDK5RAP3-218ENST00000580391 KRTAP10-1P60331 282 aa9.16□□□□□ -0.94
CDK5RAP3-218ENST00000580391 H0Y9J4 135 aa9.15□□□□□ -0.94
CDK5RAP3-218ENST00000580391 CCKP06307 115 aa9.15□□□□□ -0.94
CDK5RAP3-218ENST00000580391 Q6ZQT0 140 aa9.15□□□□□ -0.94
CDK5RAP3-218ENST00000580391 PKHD1P08F94 4074 aa9.15□□□□□ -0.94
CDK5RAP3-218ENST00000580391 ACYP1P07311 99 aa9.15□□□□□ -0.95
CDK5RAP3-218ENST00000580391 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.95
CDK5RAP3-218ENST00000580391 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
CDK5RAP3-218ENST00000580391 DSCR8Q96T75 97 aa9.14□□□□□ -0.95
CDK5RAP3-218ENST00000580391 PSORS1C2Q9UIG4 136 aa9.14□□□□□ -0.95
CDK5RAP3-218ENST00000580391 TRBV7-4A0A0J9YYF1 115 aa9.13□□□□□ -0.95
CDK5RAP3-218ENST00000580391 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
CDK5RAP3-218ENST00000580391 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
CDK5RAP3-218ENST00000580391 HAMPP81172 84 aa9.12□□□□□ -0.95
CDK5RAP3-218ENST00000580391 Q6ZSA8 131 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms